SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    737801 7xz2:D (3.5) BS03 ZN ? GO:0001778 ... Q1XH17 37770719
    737802 7xz4:A (2.2) BS01 FE 1.16.3.1 GO:0006826 ... K3ZJM0 36576327
    737803 7xz4:A (2.2) BS02 FE 1.16.3.1 GO:0006826 ... K3ZJM0 36576327
    737804 7xz4:A (2.2) BS03 FE 1.16.3.1 GO:0006826 ... K3ZJM0 36576327
    737805 7xz4:A (2.2) BS04 FE 1.16.3.1 GO:0006826 ... K3ZJM0 36576327
    737806 7xz5:R (3.1) BS01 LSC ? GO:0004930 ... P0ABE7
    Q8TDV5
    35970999
    737807 7xz6:R (2.8) BS01 I7J ? GO:0004930 ... P0ABE7
    Q8TDV5
    35970999
    737808 7xzb:A (2.25) BS01 SO4 N/A N/A N/A 36005536
    737809 7xze:A (1.8) BS01 SO4 N/A N/A N/A 36005536
    737810 7xze:B (1.8) BS01 SO4 N/A N/A N/A 36005536
    737811 7xze:B (1.8) BS02 SO4 N/A N/A N/A 36005536
    737812 7xzf:A (1.3) BS01 SO4 N/A N/A N/A 36005536
    737813 7xzf:A (1.3) BS02 SO4 N/A N/A N/A 36005536
    737814 7xzf:A (1.3) BS03 SO4 N/A N/A N/A 36005536
    737815 7xzf:A (1.3) BS04 SO4 N/A N/A N/A 36005536
    737816 7xzf:B (1.3) BS01 SO4 N/A N/A N/A 36005536
    737817 7xzf:B (1.3) BS02 SO4 N/A N/A N/A 36005536
    737818 7xzf:B (1.3) BS03 SO4 N/A N/A N/A 36005536
    737819 7xzf:B (1.3) BS04 SO4 N/A N/A N/A 36005536
    737820 7xzg:A (1.879) BS01 NAD 1.2.1.12 GO:0000166 ... Q5ADM7 N/A
    737821 7xzg:B (1.879) BS01 NAD 1.2.1.12 GO:0000166 ... Q5ADM7 N/A
    737822 7xzg:C (1.879) BS01 NAD 1.2.1.12 GO:0000166 ... Q5ADM7 N/A
    737823 7xzg:D (1.879) BS01 NAD 1.2.1.12 GO:0000166 ... Q5ADM7 N/A
    737824 7xzh:A (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737825 7xzh:A (2.78) BS02 CLR ? GO:0001678 ... Q8IWT6 37543949
    737826 7xzh:A (2.78) BS03 CLR ? GO:0001678 ... Q8IWT6 37543949
    737827 7xzh:A (2.78) BS04 P5S ? GO:0001678 ... Q8IWT6 37543949
    737828 7xzh:B (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737829 7xzh:B (2.78) BS02 CLR ? GO:0001678 ... Q8IWT6 37543949
    737830 7xzh:B (2.78) BS03 CLR ? GO:0001678 ... Q8IWT6 37543949
    737831 7xzh:B (2.78) BS04 P5S ? GO:0001678 ... Q8IWT6 37543949
    737832 7xzh:C (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737833 7xzh:C (2.78) BS02 CLR ? GO:0001678 ... Q8IWT6 37543949
    737834 7xzh:C (2.78) BS03 P5S ? GO:0001678 ... Q8IWT6 37543949
    737835 7xzh:D (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737836 7xzh:D (2.78) BS02 P5S ? GO:0001678 ... Q8IWT6 37543949
    737837 7xzh:D (2.78) BS03 CLR ? GO:0001678 ... Q8IWT6 37543949
    737838 7xzh:D (2.78) BS04 CLR ? GO:0001678 ... Q8IWT6 37543949
    737839 7xzh:E (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737840 7xzh:E (2.78) BS02 P5S ? GO:0001678 ... Q8IWT6 37543949
    737841 7xzh:E (2.78) BS03 CLR ? GO:0001678 ... Q8IWT6 37543949
    737842 7xzh:E (2.78) BS04 CLR ? GO:0001678 ... Q8IWT6 37543949
    737843 7xzh:F (2.78) BS01 P5S ? GO:0001678 ... Q8IWT6 37543949
    737844 7xzh:F (2.78) BS02 P5S ? GO:0001678 ... Q8IWT6 37543949
    737845 7xzh:F (2.78) BS03 CLR ? GO:0001678 ... Q8IWT6 37543949
    737846 7xzh:F (2.78) BS04 CLR ? GO:0001678 ... Q8IWT6 37543949
    737847 7xzi:5 (2.77) BS01 AJP ? N/A A0A2K3DWN0
    A0A2K3DWN5
    36702157
    737848 7xzi:9 (2.77) BS01 IHP ? GO:0005525 ... A0A2K3CR90 36702157
    737849 7xzi:A (2.77) BS01 IHP ? GO:0009507 ... P36495 36702157
    737850 7xzi:B (2.77) BS01 AJP ? GO:0009507 ... A8IZ79 36702157
    737851 7xzi:B (2.77) BS02 AJP ? GO:0009507 ... A8IZ79 36702157
    737852 7xzi:B (2.77) BS03 AJP ? GO:0009507 ... A8IZ79 36702157
    737853 7xzi:D (2.77) BS01 AJP ? GO:0010020 ... A0A2K3E0K3 36702157
    737854 7xzi:D (2.77) BS02 AJP ? GO:0010020 ... A0A2K3E0K3 36702157
    737855 7xzj:9 (2.97) BS01 peptide ? GO:0005525 ... A0A2K3CR90 36702157
    737856 7xzj:9 (2.97) BS02 IHP ? GO:0005525 ... A0A2K3CR90 36702157
    737857 7xzj:A (2.97) BS01 IHP ? GO:0009507 ... P36495 36702157
    737858 7xzk:A (1.54) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    737859 7xzk:A (1.54) BS02 I8F 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    737860 7xzk:B (1.54) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    737861 7xzk:B (1.54) BS02 I8F 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    737862 7xzo:A (2.31) BS01 ATP 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737863 7xzo:B (2.31) BS01 ATP 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737864 7xzo:B (2.31) BS02 BU3 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737865 7xzo:B (2.31) BS03 BU3 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737866 7xzo:B (2.31) BS04 BU3 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737867 7xzo:C (2.31) BS01 ATP 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737868 7xzo:D (2.31) BS01 ATP 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737869 7xzp:A (2.56) BS01 BER 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737870 7xzp:A (2.56) BS02 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737871 7xzp:A (2.56) BS03 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737872 7xzp:A (2.56) BS04 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737873 7xzp:A (2.56) BS05 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737874 7xzp:A (2.56) BS06 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737875 7xzp:B (2.56) BS01 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737876 7xzp:B (2.56) BS02 BER 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737877 7xzp:B (2.56) BS03 BER 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737878 7xzp:B (2.56) BS04 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737879 7xzp:B (2.56) BS05 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737880 7xzp:B (2.56) BS06 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737881 7xzp:B (2.56) BS07 PRO 6.3.4.3 GO:0004329 ... A0A379CIH2 38049785
    737882 7xzq:A (2.09) BS01 peptide 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737883 7xzr:A (2.26) BS01 peptide 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737884 7xzr:A (2.26) BS02 ANP 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737885 7xzr:A (2.26) BS03 MG 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737886 7xzr:B (2.26) BS01 peptide 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737887 7xzr:B (2.26) BS02 ANP 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737888 7xzr:B (2.26) BS03 MG 2.7.11.1 GO:0004672 ... Q9UKE5 36282922
    737889 7xzs:A (1.5) BS01 I8T 3.2.2.22 GO:0017148 ... P02879 35998389
    737890 7xzs:A (1.5) BS02 I8T 3.2.2.22 GO:0017148 ... P02879 35998389
    737891 7xzt:A (1.3) BS01 I9P 3.2.2.22 GO:0017148 ... P02879 35998389
    737892 7xzu:A (1.6) BS01 IEK 3.2.2.22 GO:0017148 ... P02879 35998389
    737893 7xzu:A (1.6) BS02 IEK 3.2.2.22 GO:0017148 ... P02879 35998389
    737894 7xzw:A (1.45) BS01 IEW 3.2.2.22 GO:0017148 ... P02879 35998389
    737895 7xzx:A (4.53) BS01 dna ? GO:0000786 ... P68431 36714865
    737896 7xzx:A (4.53) BS02 dna ? GO:0000786 ... P68431 36714865
    737897 7xzx:B (4.53) BS01 dna ? GO:0000781 ... P62805 36714865
    737898 7xzx:B (4.53) BS02 dna ? GO:0000781 ... P62805 36714865
    737899 7xzx:C (4.53) BS01 dna ? GO:0000786 ... P04908 36714865
    737900 7xzx:C (4.53) BS02 dna ? GO:0000786 ... P04908 36714865
    737901 7xzx:D (4.53) BS01 dna ? GO:0000786 ... P06899 36714865
    737902 7xzx:D (4.53) BS02 dna ? GO:0000786 ... P06899 36714865
    737903 7xzx:E (4.53) BS01 dna ? GO:0000786 ... P68431 36714865
    737904 7xzx:E (4.53) BS02 dna ? GO:0000786 ... P68431 36714865
    737905 7xzx:F (4.53) BS01 dna ? GO:0000781 ... P62805 36714865
    737906 7xzx:F (4.53) BS02 dna ? GO:0000781 ... P62805 36714865
    737907 7xzx:G (4.53) BS01 dna ? GO:0000786 ... P04908 36714865
    737908 7xzx:G (4.53) BS02 dna ? GO:0000786 ... P04908 36714865
    737909 7xzx:H (4.53) BS01 dna ? GO:0000786 ... P06899 36714865
    737910 7xzx:H (4.53) BS02 dna ? GO:0000786 ... P06899 36714865
    737911 7xzx:K (4.53) BS01 dna ? GO:0000976 ... P04637 36714865
    737912 7xzx:K (4.53) BS02 dna ? GO:0000976 ... P04637 36714865
    737913 7xzx:L (4.53) BS01 dna ? GO:0000976 ... P04637 36714865
    737914 7xzx:L (4.53) BS02 dna ? GO:0000976 ... P04637 36714865
    737915 7xzx:M (4.53) BS01 dna ? GO:0000976 ... P04637 36714865
    737916 7xzx:M (4.53) BS02 dna ? GO:0000976 ... P04637 36714865
    737917 7xzx:N (4.53) BS01 dna ? GO:0000976 ... P04637 36714865
    737918 7xzx:N (4.53) BS02 dna ? GO:0000976 ... P04637 36714865
    737919 7xzy:A (3.97) BS01 dna ? GO:0000786 ... P68431 36714865
    737920 7xzy:A (3.97) BS02 dna ? GO:0000786 ... P68431 36714865
    737921 7xzy:B (3.97) BS01 dna ? GO:0000781 ... P62805 36714865
    737922 7xzy:B (3.97) BS02 dna ? GO:0000781 ... P62805 36714865
    737923 7xzy:C (3.97) BS01 dna ? GO:0000786 ... P04908 36714865
    737924 7xzy:C (3.97) BS02 dna ? GO:0000786 ... P04908 36714865
    737925 7xzy:D (3.97) BS01 dna ? GO:0000786 ... P06899 36714865
    737926 7xzy:D (3.97) BS02 dna ? GO:0000786 ... P06899 36714865
    737927 7xzy:E (3.97) BS01 dna ? GO:0000786 ... P68431 36714865
    737928 7xzy:E (3.97) BS02 dna ? GO:0000786 ... P68431 36714865
    737929 7xzy:F (3.97) BS01 dna ? GO:0000781 ... P62805 36714865
    737930 7xzy:F (3.97) BS02 dna ? GO:0000781 ... P62805 36714865
    737931 7xzy:G (3.97) BS01 dna ? GO:0000786 ... P04908 36714865
    737932 7xzy:G (3.97) BS02 dna ? GO:0000786 ... P04908 36714865
    737933 7xzy:H (3.97) BS01 dna ? GO:0000786 ... P06899 36714865
    737934 7xzy:H (3.97) BS02 dna ? GO:0000786 ... P06899 36714865
    737935 7xzz:A (4.07) BS01 dna ? GO:0000786 ... P68431 36714865
    737936 7xzz:A (4.07) BS02 dna ? GO:0000786 ... P68431 36714865
    737937 7xzz:B (4.07) BS01 dna ? GO:0000781 ... P62805 36714865
    737938 7xzz:B (4.07) BS02 dna ? GO:0000781 ... P62805 36714865
    737939 7xzz:C (4.07) BS01 dna ? GO:0000786 ... P04908 36714865
    737940 7xzz:C (4.07) BS02 dna ? GO:0000786 ... P04908 36714865
    737941 7xzz:D (4.07) BS01 dna ? GO:0000786 ... P06899 36714865
    737942 7xzz:D (4.07) BS02 dna ? GO:0000786 ... P06899 36714865
    737943 7xzz:E (4.07) BS01 dna ? GO:0000786 ... P68431 36714865
    737944 7xzz:E (4.07) BS02 dna ? GO:0000786 ... P68431 36714865
    737945 7xzz:F (4.07) BS01 dna ? GO:0000781 ... P62805 36714865
    737946 7xzz:F (4.07) BS02 dna ? GO:0000781 ... P62805 36714865
    737947 7xzz:G (4.07) BS01 dna ? GO:0000786 ... P04908 36714865
    737948 7xzz:G (4.07) BS02 dna ? GO:0000786 ... P04908 36714865
    737949 7xzz:H (4.07) BS01 dna ? GO:0000786 ... P06899 36714865
    737950 7xzz:H (4.07) BS02 dna ? GO:0000786 ... P06899 36714865
    737951 7xzz:K (4.07) BS01 dna ? GO:0000122 ... P04637 36714865
    737952 7xzz:K (4.07) BS02 dna ? GO:0000122 ... P04637 36714865
    737953 7xzz:L (4.07) BS01 dna ? GO:0000122 ... P04637 36714865
    737954 7xzz:L (4.07) BS02 dna ? GO:0000122 ... P04637 36714865
    737955 7xzz:M (4.07) BS01 dna ? GO:0000122 ... P04637 36714865
    737956 7xzz:M (4.07) BS02 dna ? GO:0000122 ... P04637 36714865
    737957 7xzz:N (4.07) BS01 dna ? GO:0000122 ... P04637 36714865
    737958 7xzz:N (4.07) BS02 dna ? GO:0000122 ... P04637 36714865
    737959 7y00:A (3.96) BS01 dna ? GO:0000786 ... P68431 36714865
    737960 7y00:A (3.96) BS02 dna ? GO:0000786 ... P68431 36714865
    737961 7y00:B (3.96) BS01 dna ? GO:0000781 ... P62805 36714865
    737962 7y00:B (3.96) BS02 dna ? GO:0000781 ... P62805 36714865
    737963 7y00:C (3.96) BS01 dna ? GO:0000786 ... P04908 36714865
    737964 7y00:C (3.96) BS02 dna ? GO:0000786 ... P04908 36714865
    737965 7y00:D (3.96) BS01 dna ? GO:0000786 ... P06899 36714865
    737966 7y00:D (3.96) BS02 dna ? GO:0000786 ... P06899 36714865
    737967 7y00:E (3.96) BS01 dna ? GO:0000786 ... P68431 36714865
    737968 7y00:E (3.96) BS02 dna ? GO:0000786 ... P68431 36714865
    737969 7y00:F (3.96) BS01 dna ? GO:0000781 ... P62805 36714865
    737970 7y00:F (3.96) BS02 dna ? GO:0000781 ... P62805 36714865
    737971 7y00:G (3.96) BS01 dna ? GO:0000786 ... P04908 36714865
    737972 7y00:G (3.96) BS02 dna ? GO:0000786 ... P04908 36714865
    737973 7y00:H (3.96) BS01 dna ? GO:0000786 ... P06899 36714865
    737974 7y00:H (3.96) BS02 dna ? GO:0000786 ... P06899 36714865
    737975 7y01:A (2.8) BS01 dna ? GO:0003690 ... B6TE84 36541721
    737976 7y01:A (2.8) BS02 ZN ? GO:0003690 ... B6TE84 36541721
    737977 7y02:A (1.6) BS01 IEZ 3.2.2.22 GO:0017148 ... P02879 35998389
    737978 7y02:A (1.6) BS02 IEZ 3.2.2.22 GO:0017148 ... P02879 35998389
    737979 7y03:A (1.35) BS01 IF4 3.2.2.22 GO:0017148 ... P02879 35998389
    737980 7y03:A (1.35) BS02 IF4 3.2.2.22 GO:0017148 ... P02879 35998389
    737981 7y04:A (3.5) BS01 peptide ? GO:0001890 ... P11499 36649707
    737982 7y04:A (3.5) BS02 ADP ? GO:0001890 ... P11499 36649707
    737983 7y04:A (3.5) BS03 BEF ? GO:0001890 ... P11499 36649707
    737984 7y04:B (3.5) BS01 peptide ? GO:0001890 ... P11499 36649707
    737985 7y04:B (3.5) BS02 ADP ? GO:0001890 ... P11499 36649707
    737986 7y04:B (3.5) BS03 BEF ? GO:0001890 ... P11499 36649707
    737987 7y05:A (1.6) BS01 IFH 3.2.2.22 GO:0017148 ... P02879 35998389
    737988 7y06:A (1.35) BS01 IFQ 3.2.2.22 GO:0017148 ... P02879 35998389
    737989 7y06:A (1.35) BS02 IFQ 3.2.2.22 GO:0017148 ... P02879 35998389
    737990 7y07:A (1.25) BS01 IFX 3.2.2.22 GO:0017148 ... P02879 35998389
    737991 7y07:A (1.25) BS02 IFX 3.2.2.22 GO:0017148 ... P02879 35998389
    737992 7y08:A (1.25) BS01 RS8 3.2.2.22 GO:0017148 ... P02879 35998389
    737993 7y0a:A (2.317) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737994 7y0a:A (2.317) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737995 7y0a:B (2.317) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737996 7y0a:B (2.317) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737997 7y0a:C (2.317) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737998 7y0a:C (2.317) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    737999 7y0a:D (2.317) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 N/A
    738000 7y0a:D (2.317) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).