SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3751 3752 3753 3754 3755 3756 3757 3758 3759 3760 3761 3762 3763 3764 3765 3766 3767 3768 3769 3770 3771 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    752001 7y98:B (2.27) BS02 TES ? GO:0004497 ... M5PFT9 N/A
    752002 7y99:A (1.9) BS01 peptide ? GO:0042981 ... Q64373 38368459
    752003 7y99:A (1.9) BS02 IQ8 ? GO:0042981 ... Q64373 38368459
    752004 7y9c:A (2.1) BS01 peptide 2.1.1.- GO:0005515 ... Q9H1A3 37015930
    752005 7y9c:A (2.1) BS02 SAH 2.1.1.- GO:0005515 ... Q9H1A3 37015930
    752006 7y9c:B (2.1) BS01 peptide 2.1.1.- GO:0005515 ... Q9H1A3 37015930
    752007 7y9c:B (2.1) BS02 SAH 2.1.1.- GO:0005515 ... Q9H1A3 37015930
    752008 7y9g:A (2.18) BS01 POP N/A GO:0010333 ... N/A 37414771
    752009 7y9g:A (2.18) BS02 MG N/A GO:0010333 ... N/A 37414771
    752010 7y9g:B (2.18) BS01 POP N/A GO:0010333 ... N/A 37414771
    752011 7y9g:B (2.18) BS02 MG N/A GO:0010333 ... N/A 37414771
    752012 7y9i:A (2.07) BS01 G4P 3.6.5.- GO:0003924 ... Q9SA73 36533075
    752013 7y9j:A (1.83) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752014 7y9j:B (1.83) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752015 7y9j:B (1.83) BS02 H5J 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752016 7y9k:A (2.23) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752017 7y9k:B (2.23) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752018 7y9l:A (1.76) BS01 6VP 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752019 7y9l:A (1.76) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752020 7y9l:B (1.76) BS01 6VP 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752021 7y9l:B (1.76) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752022 7y9m:A (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752023 7y9m:B (2.16) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    752024 7y9o:A (1.84) BS01 HEM ? GO:0004497 ... M5PFT9 N/A
    752025 7y9o:A (1.84) BS02 CA ? GO:0004497 ... M5PFT9 N/A
    752026 7y9o:A (1.84) BS03 CA ? GO:0004497 ... M5PFT9 N/A
    752027 7y9p:A (2.8) BS01 ZN 1.1.1.9 GO:0003939 ... P22144 36732376
    752028 7y9p:A (2.8) BS02 ZN 1.1.1.9 GO:0003939 ... P22144 36732376
    752029 7y9u:A (3.3) BS01 E7O ? GO:0005515 ... Q9C6B8 35917925
    752030 7y9u:B (3.3) BS01 E7O ? GO:0005515 ... Q9C6B8 35917925
    752031 7y9v:A (3.2) BS01 IAC ? GO:0005515 ... Q9C6B8 35917925
    752032 7y9v:B (3.2) BS01 IAC ? GO:0005515 ... Q9C6B8 35917925
    752033 7y9x:A (2.49) BS01 rna ? GO:0051607 ... A0A401FT36 36423304
    752034 7y9x:A (2.49) BS02 ZN ? GO:0051607 ... A0A401FT36 36423304
    752035 7y9x:A (2.49) BS03 ZN ? GO:0051607 ... A0A401FT36 36423304
    752036 7y9x:A (2.49) BS04 ZN ? GO:0051607 ... A0A401FT36 36423304
    752037 7y9x:A (2.49) BS05 ZN ? GO:0051607 ... A0A401FT36 36423304
    752038 7y9y:A (2.77) BS01 rna ? GO:0051607 ... A0A401FT36 36423304
    752039 7y9y:A (2.77) BS02 rna ? GO:0051607 ... A0A401FT36 36423304
    752040 7y9y:A (2.77) BS03 ZN ? GO:0051607 ... A0A401FT36 36423304
    752041 7y9y:A (2.77) BS04 ZN ? GO:0051607 ... A0A401FT36 36423304
    752042 7y9y:A (2.77) BS05 ZN ? GO:0051607 ... A0A401FT36 36423304
    752043 7y9y:A (2.77) BS06 ZN ? GO:0051607 ... A0A401FT36 36423304
    752044 7y9z:D (2.85) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36002453
    752045 7ya0:D (3.1) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36002453
    752046 7ya0:E (3.1) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36002453
    752047 7ya0:F (3.1) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36002453
    752048 7ya1:A (3.11) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36002453
    752049 7ya3:A (3.0) BS01 NAP 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752050 7ya3:A (3.0) BS02 AZI 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752051 7ya3:B (3.0) BS01 NAP 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752052 7ya3:B (3.0) BS02 AZI 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752053 7ya4:A (1.8) BS01 NAD 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752054 7ya4:A (1.8) BS02 AZI 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752055 7ya4:B (1.8) BS01 NAD 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752056 7ya4:B (1.8) BS02 AZI 1.17.1.9 GO:0000166 ... J2HCX1 N/A
    752057 7ya5:A (1.85) BS01 peptide ? GO:0042981 ... P10415 38368459
    752058 7ya5:A (1.85) BS02 JFF ? GO:0042981 ... P10415 38368459
    752059 7yaa:A (1.4) BS01 peptide ? GO:0042981 ... Q07817 38368459
    752060 7yaa:A (1.4) BS02 JJ9 ? GO:0042981 ... Q07817 38368459
    752061 7yab:A (-1.00) BS01 ZN ? GO:0008270 ... Q8TCF1 38537699
    752062 7yab:A (-1.00) BS02 ZN ? GO:0008270 ... Q8TCF1 38537699
    752063 7yac:E (3.24) BS01 IUD ? GO:0004930 ... P30874 36810324
    752064 7yad:C (2.66) BS01 FUC N/A N/A N/A 36002453
    752065 7yae:E (3.37) BS01 peptide ? GO:0004930 ... P30874 36810324
    752066 7yae:E (3.37) BS02 CLR ? GO:0004930 ... P30874 36810324
    752067 7yag:A (3.1) BS01 ACP 7.2.2.10 GO:0000139 ... P98194 36867705
    752068 7yag:A (3.1) BS02 CA 7.2.2.10 GO:0000139 ... P98194 36867705
    752069 7yah:A (3.12) BS01 ACP 7.2.2.10 GO:0000139 ... P98194 36867705
    752070 7yah:A (3.12) BS02 CA 7.2.2.10 GO:0000139 ... P98194 36867705
    752071 7yai:A (3.14) BS01 ACP 7.2.2.10 GO:0000139 ... P98194 36867705
    752072 7yai:A (3.14) BS02 CA 7.2.2.10 GO:0000139 ... P98194 36867705
    752073 7yaj:A (3.16) BS01 ACP 7.2.2.10 GO:0000139 ... P98194 36867705
    752074 7yaj:A (3.16) BS02 MN 7.2.2.10 GO:0000139 ... P98194 36867705
    752075 7yam:A (3.3) BS01 BEF 7.2.2.10 GO:0000139 ... P98194 36867705
    752076 7yam:A (3.3) BS02 MG 7.2.2.10 GO:0000139 ... P98194 36867705
    752077 7yav:A (2.1) BS01 FAD N/A GO:0016491 ... N/A 38509059
    752078 7yav:B (2.1) BS01 FAD N/A GO:0016491 ... N/A 38509059
    752079 7yaw:A (2.1) BS01 IGS 2.7.11.25 GO:0004672 ... Q9NYL2 37220641
    752080 7yaw:B (2.1) BS01 IGS 2.7.11.25 GO:0004672 ... Q9NYL2 37220641
    752081 7yaw:C (2.1) BS01 IGS 2.7.11.25 GO:0004672 ... Q9NYL2 37220641
    752082 7yaw:D (2.1) BS01 IGS 2.7.11.25 GO:0004672 ... Q9NYL2 37220641
    752083 7yax:A (2.01) BS01 SO4 ? N/A A0A2Z5XCT7 38526556
    752084 7yax:A (2.01) BS02 SO4 ? N/A A0A2Z5XCT7 38526556
    752085 7yax:B (2.01) BS01 SO4 ? N/A A0A2Z5XCT7 38526556
    752086 7yax:B (2.01) BS02 SO4 ? N/A A0A2Z5XCT7 38526556
    752087 7yax:C (2.01) BS01 SO4 ? N/A A0A2Z5XCT7 38526556
    752088 7yax:C (2.01) BS02 SO4 ? N/A A0A2Z5XCT7 38526556
    752089 7yax:D (2.01) BS01 SO4 ? N/A A0A2Z5XCT7 38526556
    752090 7yax:D (2.01) BS02 SO4 ? N/A A0A2Z5XCT7 38526556
    752091 7yaz:A (2.54) BS01 IGV 2.7.11.25 GO:0004672 ... Q9NYL2 37220641
    752092 7yb1:A (3.3) BS01 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752093 7yb1:B (3.3) BS01 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752094 7yb1:C (3.3) BS01 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752095 7yb1:D (3.3) BS01 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752096 7yb2:A (1.85) BS01 EMO ? GO:0000166 ... A0A2G5I2X5 36681664
    752097 7yb2:A (1.85) BS02 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752098 7yb2:B (1.85) BS01 EMO ? GO:0000166 ... A0A2G5I2X5 36681664
    752099 7yb2:B (1.85) BS02 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752100 7yb2:C (1.85) BS01 EMO ? GO:0000166 ... A0A2G5I2X5 36681664
    752101 7yb2:C (1.85) BS02 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752102 7yb2:D (1.85) BS01 EMO ? GO:0000166 ... A0A2G5I2X5 36681664
    752103 7yb2:D (1.85) BS02 NAP ? GO:0000166 ... A0A2G5I2X5 36681664
    752104 7yb7:A (2.2) BS01 peptide ? GO:0042981 ... P10415
    Q07817
    38368459
    752105 7yb7:A (2.2) BS02 IQ8 ? GO:0042981 ... P10415
    Q07817
    38368459
    752106 7yb7:A (2.2) BS03 IQ8 ? GO:0042981 ... P10415
    Q07817
    38368459
    752107 7yb7:B (2.2) BS01 peptide ? GO:0042981 ... P10415
    Q07817
    38368459
    752108 7yb7:B (2.2) BS02 IQ8 ? GO:0042981 ... P10415
    Q07817
    38368459
    752109 7yb8:A (1.98) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    752110 7yb8:A (1.98) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    752111 7yb8:A (1.98) BS03 2HG 1.14.11.16 GO:0018193 ... Q12797 N/A
    752112 7yb9:A (1.54) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    752113 7yb9:A (1.54) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    752114 7yb9:A (1.54) BS03 S2G 1.14.11.16 GO:0018193 ... Q12797 N/A
    752115 7yba:A (1.86) BS01 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    752116 7yba:A (1.86) BS02 IO9 1.14.11.16 GO:0018193 ... Q12797 N/A
    752117 7ybb:A (1.68) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    752118 7ybb:A (1.68) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    752119 7ybb:A (1.68) BS03 IO9 1.14.11.16 GO:0018193 ... Q12797 N/A
    752120 7ybc:A (1.84) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    752121 7ybc:A (1.84) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    752122 7ybc:A (1.84) BS03 IOW 1.14.11.16 GO:0018193 ... Q12797 N/A
    752123 7ybf:A (2.15) BS01 peptide ? GO:0000786 ... P04910
    P04913
    38773107
    752124 7ybg:A (1.9) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 N/A
    752125 7ybo:A (2.307) BS01 IH7 2.7.10.1 GO:0004672 ... P22455 36278929
    752126 7ybp:A (2.243) BS01 IH7 2.7.10.1 GO:0004672 ... P22455 36278929
    752127 7ybr:A (1.71) BS01 TCW ? GO:0001523 ... P02766 36851846
    752128 7ybr:B (1.71) BS01 TCW ? GO:0001523 ... P02766 36851846
    752129 7ybu:A (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752130 7ybu:B (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752131 7ybu:C (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752132 7ybu:D (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752133 7ybu:E (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752134 7ybu:F (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752135 7ybu:G (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752136 7ybu:H (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752137 7ybu:I (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752138 7ybu:J (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05165 39223421
    752139 7ybu:K (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752140 7ybu:P (2.2) BS01 BTI 6.4.1.3 GO:0004658 ... P05166 39223421
    752141 7ybx:A (2.233) BS01 IH7 2.7.10.1 GO:0004672 ... P22455 36278929
    752142 7yc1:A (2.535) BS01 IIQ 2.7.10.1 GO:0004672 ... P22455 36278929
    752143 7yc2:A (2.9) BS01 peptide ? N/A Q9C0D3 N/A
    752144 7yc2:A (2.9) BS02 peptide ? N/A Q9C0D3 N/A
    752145 7yc2:B (2.9) BS01 peptide ? N/A Q9C0D3 N/A
    752146 7yc2:B (2.9) BS02 peptide ? N/A Q9C0D3 N/A
    752147 7yc2:C (2.9) BS01 peptide ? N/A Q9C0D3 N/A
    752148 7yc2:D (2.9) BS01 peptide ? N/A Q9C0D3 N/A
    752149 7yc3:A (1.987) BS01 IIW 2.7.10.1 GO:0004672 ... P22455 36278929
    752150 7yc6:A (2.4) BS01 ZN 6.3.5.2 GO:0003922 ... Q58970 N/A
    752151 7yc6:A (2.4) BS02 ZN 6.3.5.2 GO:0003922 ... Q58970 N/A
    752152 7yc6:A (2.4) BS03 ZN 6.3.5.2 GO:0003922 ... Q58970 N/A
    752153 7yc6:A (2.4) BS04 ZN 6.3.5.2 GO:0003922 ... Q58970 N/A
    752154 7yc7:A (1.95) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752155 7yc7:A (1.95) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752156 7yc7:A (1.95) BS03 FAD 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752157 7yc7:B (1.95) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752158 7yc7:B (1.95) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752159 7yc7:B (1.95) BS03 FAD 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    752160 7yc9:A (1.4) BS01 IS4 2.7.10.2 GO:0004672 ... Q06187 36912866
    752161 7yca:1 (2.94) BS01 CHL ? GO:0009507 ... A0AA97PZG2 36951548
    752162 7yca:1 (2.94) BS02 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752163 7yca:1 (2.94) BS03 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752164 7yca:1 (2.94) BS04 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752165 7yca:1 (2.94) BS05 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752166 7yca:1 (2.94) BS06 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752167 7yca:1 (2.94) BS07 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752168 7yca:1 (2.94) BS08 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752169 7yca:1 (2.94) BS09 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752170 7yca:1 (2.94) BS10 IWJ ? GO:0009507 ... A0AA97PZG2 36951548
    752171 7yca:1 (2.94) BS11 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752172 7yca:1 (2.94) BS12 CLA ? GO:0009507 ... A0AA97PZG2 36951548
    752173 7yca:2 (2.94) BS01 CHL ? GO:0009507 ... Q3B9U6 36951548
    752174 7yca:2 (2.94) BS02 CLA ? GO:0009507 ... Q3B9U6 36951548
    752175 7yca:2 (2.94) BS03 CLA ? GO:0009507 ... Q3B9U6 36951548
    752176 7yca:2 (2.94) BS04 CLA ? GO:0009507 ... Q3B9U6 36951548
    752177 7yca:2 (2.94) BS05 CHL ? GO:0009507 ... Q3B9U6 36951548
    752178 7yca:2 (2.94) BS06 CLA ? GO:0009507 ... Q3B9U6 36951548
    752179 7yca:2 (2.94) BS07 CHL ? GO:0009507 ... Q3B9U6 36951548
    752180 7yca:2 (2.94) BS08 CLA ? GO:0009507 ... Q3B9U6 36951548
    752181 7yca:2 (2.94) BS09 CLA ? GO:0009507 ... Q3B9U6 36951548
    752182 7yca:2 (2.94) BS10 CLA ? GO:0009507 ... Q3B9U6 36951548
    752183 7yca:2 (2.94) BS11 CLA ? GO:0009507 ... Q3B9U6 36951548
    752184 7yca:2 (2.94) BS12 CLA ? GO:0009507 ... Q3B9U6 36951548
    752185 7yca:2 (2.94) BS13 CLA ? GO:0009507 ... Q3B9U6 36951548
    752186 7yca:2 (2.94) BS14 CLA ? GO:0009507 ... Q3B9U6 36951548
    752187 7yca:2 (2.94) BS15 CHL ? GO:0009507 ... Q3B9U6 36951548
    752188 7yca:2 (2.94) BS16 Q6L ? GO:0009507 ... Q3B9U6 36951548
    752189 7yca:2 (2.94) BS17 CHL ? GO:0009507 ... Q3B9U6 36951548
    752190 7yca:2 (2.94) BS18 CLA ? GO:0009507 ... Q3B9U6 36951548
    752191 7yca:3 (2.94) BS01 CHL ? GO:0009507 ... Q3B9U5 36951548
    752192 7yca:3 (2.94) BS02 CLA ? GO:0009507 ... Q3B9U5 36951548
    752193 7yca:3 (2.94) BS03 CLA ? GO:0009507 ... Q3B9U5 36951548
    752194 7yca:3 (2.94) BS04 CLA ? GO:0009507 ... Q3B9U5 36951548
    752195 7yca:3 (2.94) BS05 CLA ? GO:0009507 ... Q3B9U5 36951548
    752196 7yca:3 (2.94) BS06 CLA ? GO:0009507 ... Q3B9U5 36951548
    752197 7yca:3 (2.94) BS07 CLA ? GO:0009507 ... Q3B9U5 36951548
    752198 7yca:3 (2.94) BS08 CHL ? GO:0009507 ... Q3B9U5 36951548
    752199 7yca:3 (2.94) BS09 CLA ? GO:0009507 ... Q3B9U5 36951548
    752200 7yca:3 (2.94) BS10 CLA ? GO:0009507 ... Q3B9U5 36951548

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).