SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    764601 7zoy:A (1.91) BS01 CL N/A GO:0005216 ... A0A9X9ZA75 36309497
    764602 7zoy:A (1.91) BS02 SO4 N/A GO:0005216 ... A0A9X9ZA75 36309497
    764603 7zp2:A (2.292) BS01 EJG 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    764604 7zp2:B (2.292) BS01 EJG 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    764605 7zp7:A (1.7) BS01 JRP 3.8.2.2 GO:0005509 ... Q7SIG4 36130727
    764606 7zp7:B (1.7) BS01 JRP 3.8.2.2 GO:0005509 ... Q7SIG4 36130727
    764607 7zp8:0 (2.2) BS01 rna ? GO:0000027 ... P0A7M2 35869078
    764608 7zp8:1 (2.2) BS01 rna ? GO:0000027 ... P0A7M6 35869078
    764609 7zp8:2 (2.2) BS01 rna ? GO:0000027 ... P0AG51 35869078
    764610 7zp8:3 (2.2) BS01 rna ? GO:0000027 ... P0A7N4 35869078
    764611 7zp8:4 (2.2) BS01 rna ? GO:0000027 ... P0A7N9 35869078
    764612 7zp8:6 (2.2) BS01 rna ? GO:0002181 ... P0A7P5 35869078
    764613 7zp8:7 (2.2) BS01 rna ? GO:0002181 ... P0A7Q1 35869078
    764614 7zp8:8 (2.2) BS01 rna ? GO:0003735 ... A0A2X1PTA3 35869078
    764615 7zp8:c (2.2) BS01 rna ? GO:0000027 ... P60422 35869078
    764616 7zp8:d (2.2) BS01 rna ? GO:0000027 ... P60438 35869078
    764617 7zp8:e (2.2) BS01 rna ? GO:0001070 ... P60723 35869078
    764618 7zp8:f (2.2) BS01 rna ? GO:0000027 ... P62399 35869078
    764619 7zp8:f (2.2) BS02 rna ? GO:0000027 ... P62399 35869078
    764620 7zp8:f (2.2) BS03 rna ? GO:0000027 ... P62399 35869078
    764621 7zp8:g (2.2) BS01 rna ? GO:0000027 ... P0AG55 35869078
    764622 7zp8:h (2.2) BS01 rna ? GO:0002181 ... P0A7R1 35869078
    764623 7zp8:j (2.2) BS01 rna ? GO:0002181 ... P0AA10 35869078
    764624 7zp8:k (2.2) BS01 rna ? GO:0002181 ... P0ADY3 35869078
    764625 7zp8:l (2.2) BS01 rna ? GO:0002181 ... P02413 35869078
    764626 7zp8:m (2.2) BS01 rna ? GO:0000027 ... P0ADY7 35869078
    764627 7zp8:m (2.2) BS02 rna ? GO:0000027 ... P0ADY7 35869078
    764628 7zp8:n (2.2) BS01 rna ? GO:0000027 ... P0AG44 35869078
    764629 7zp8:o (2.2) BS01 rna ? GO:0002181 ... P0C018 35869078
    764630 7zp8:o (2.2) BS02 rna ? GO:0002181 ... P0C018 35869078
    764631 7zp8:p (2.2) BS01 rna ? GO:0000027 ... P0A7K6 35869078
    764632 7zp8:q (2.2) BS01 rna ? GO:0000027 ... P0A7L3 35869078
    764633 7zp8:r (2.2) BS01 rna ? GO:0002181 ... P0AG48 35869078
    764634 7zp8:s (2.2) BS01 rna ? GO:0002181 ... P61175 35869078
    764635 7zp8:t (2.2) BS01 rna ? GO:0000027 ... P0ADZ0 35869078
    764636 7zp8:u (2.2) BS01 rna ? GO:0000027 ... P60624 35869078
    764637 7zp8:w (2.2) BS01 rna ? GO:0000027 ... P68919 35869078
    764638 7zp8:w (2.2) BS02 rna ? GO:0000027 ... P68919 35869078
    764639 7zp8:y (2.2) BS01 rna ? GO:0000027 ... P0A7L8 35869078
    764640 7zp8:y (2.2) BS02 rna ? GO:0000027 ... P0A7L8 35869078
    764641 7zp8:y (2.2) BS03 rna ? GO:0000027 ... P0A7L8 35869078
    764642 7zp8:z (2.2) BS01 rna ? N/A P13466 35869078
    764643 7zp8:z (2.2) BS02 rna ? N/A P13466 35869078
    764644 7zp9:A (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764645 7zp9:B (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764646 7zp9:D (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764647 7zp9:D (2.82) BS02 MG ? GO:0005886 ... O87952 N/A
    764648 7zp9:E (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764649 7zp9:F (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764650 7zp9:H (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764651 7zp9:J (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764652 7zp9:L (2.82) BS01 ADP ? GO:0005886 ... O87952 N/A
    764653 7zpa:A (3.9) BS01 dna ? GO:0003700 ... Q5WKW3 37378428
    764654 7zpa:A (3.9) BS02 dna ? GO:0003700 ... Q5WKW3 37378428
    764655 7zpa:B (3.9) BS01 dna ? GO:0003700 ... Q5WKW3 37378428
    764656 7zpa:B (3.9) BS02 dna ? GO:0003700 ... Q5WKW3 37378428
    764657 7zpb:A (2.31) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 37250172
    764658 7zpb:A (2.31) BS02 FUC 3.1.1.8 GO:0001540 ... P06276 37250172
    764659 7zpb:A (2.31) BS03 JS0 3.1.1.8 GO:0001540 ... P06276 37250172
    764660 7zpc:A (1.4) BS01 JLC 2.7.11.22 GO:0000082 ... P24941 35943172
    764661 7zpd:A (1.4) BS01 JVC 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 38809037
    764662 7zpd:B (1.4) BS01 JVC 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    764663 7zpe:A (2.64) BS01 JP6 N/A GO:0004672 ... O14874 N/A
    764664 7zpf:A (2.54) BS01 ZN ? N/A Q2VL32 37973928
    764665 7zpf:B (2.54) BS01 ZN ? N/A Q2VL32 37973928
    764666 7zpf:C (2.54) BS01 ZN ? N/A Q2VL32 37973928
    764667 7zpf:D (2.54) BS01 ZN ? N/A Q2VL32 37973928
    764668 7zpg:A (1.16) BS01 JQX 3.1.1.23 GO:0004622 ... Q99685 36084029
    764669 7zpi:A (5.91) BS01 rna 3.1.26.3 GO:0000122 ... Q8R418 36332606
    764670 7zpj:A (3.81) BS01 rna 3.1.26.3 GO:0000122 ... Q8R418 36332606
    764671 7zpk:A (3.81) BS01 rna 3.1.26.3 GO:0000122 ... Q8R418 36332606
    764672 7zpk:C (3.81) BS01 rna ? GO:0002753 ... P97473 36332606
    764673 7zpl:A (3.12) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 36596301
    764674 7zpl:B (3.12) BS01 rna 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    764675 7zpl:B (3.12) BS02 MG 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    764676 7zpl:D (3.12) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 36596301
    764677 7zpl:E (3.12) BS01 rna 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    764678 7zpo:A (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764679 7zpo:B (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764680 7zpo:D (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764681 7zpo:E (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764682 7zpo:F (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764683 7zpo:H (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764684 7zpo:J (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764685 7zpo:L (3.24) BS01 ADP ? GO:0005886 ... O87952 N/A
    764686 7zpp:A (4.5) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764687 7zpp:A (4.5) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764688 7zpp:A (4.5) BS03 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764689 7zpp:I (4.5) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764690 7zpp:I (4.5) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764691 7zpp:I (4.5) BS03 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.4
    3.4.23.-
    3.6.1.23
    GO:0003676 ... P35956 28059770
    764692 7zpq:AA (3.47) BS01 rna ? GO:0003735 ... P32905 36801861
    764693 7zpq:AB (3.47) BS01 rna ? GO:0000462 ... P33442 36801861
    764694 7zpq:AC (3.47) BS01 rna ? GO:0003723 ... P25443 36801861
    764695 7zpq:AD (3.47) BS01 rna ? GO:0000054 ... P05750 36801861
    764696 7zpq:AE (3.47) BS01 rna ? GO:0002181 ... P0CX35 36801861
    764697 7zpq:AF (3.47) BS01 rna ? GO:0000054 ... P26783 36801861
    764698 7zpq:AG (3.47) BS01 rna ? GO:0000462 ... P0CX37 36801861
    764699 7zpq:AH (3.47) BS01 rna ? GO:0002181 ... P26786 36801861
    764700 7zpq:AI (3.47) BS01 rna ? GO:0000462 ... P0CX39 36801861
    764701 7zpq:AI (3.47) BS02 rna ? GO:0000462 ... P0CX39 36801861
    764702 7zpq:AJ (3.47) BS01 rna ? GO:0000462 ... O13516 36801861
    764703 7zpq:AK (3.47) BS01 rna ? N/A Q08745 36801861
    764704 7zpq:AL (3.47) BS01 rna ? GO:0000028 ... P0CX47 36801861
    764705 7zpq:AM (3.47) BS01 rna ? GO:0003735 ... P48589 36801861
    764706 7zpq:AN (3.47) BS01 rna ? GO:0000462 ... P05756 36801861
    764707 7zpq:AO (3.47) BS01 rna ? GO:0000028 ... P39516 36801861
    764708 7zpq:AP (3.47) BS01 rna ? GO:0003723 ... Q01855 36801861
    764709 7zpq:AQ (3.47) BS01 rna ? GO:0000462 ... P0CX51 36801861
    764710 7zpq:AR (3.47) BS01 rna ? GO:0000028 ... P14127 36801861
    764711 7zpq:AS (3.47) BS01 rna ? GO:0000054 ... P0CX55 36801861
    764712 7zpq:AT (3.47) BS01 rna ? GO:0000054 ... P07280 36801861
    764713 7zpq:AU (3.47) BS01 rna ? GO:0003723 ... P38701 36801861
    764714 7zpq:AW (3.47) BS01 rna ? GO:0002181 ... P0C0W1 36801861
    764715 7zpq:AX (3.47) BS01 rna ? GO:0000462 ... P0CX29 36801861
    764716 7zpq:AY (3.47) BS01 rna ? GO:0000462 ... P0CX31 36801861
    764717 7zpq:AZ (3.47) BS01 rna ? N/A Q3E792 36801861
    764718 7zpq:Aa (3.47) BS01 rna ? GO:0003735 ... P39939 36801861
    764719 7zpq:Ab (3.47) BS01 rna ? GO:0000028 ... P35997 36801861
    764720 7zpq:Ac (3.47) BS01 rna ? GO:0000028 ... Q3E7X9 36801861
    764721 7zpq:Ad (3.47) BS01 rna ? GO:0002181 ... P41057 36801861
    764722 7zpq:Ad (3.47) BS02 ZN ? GO:0002181 ... P41057 36801861
    764723 7zpq:Ae (3.47) BS01 rna ? GO:0002181 ... P0CX33 36801861
    764724 7zpq:Af (3.47) BS01 rna ? GO:0003735 ... P05759 36801861
    764725 7zpq:Af (3.47) BS02 ZN ? GO:0003735 ... P05759 36801861
    764726 7zpq:Ag (3.47) BS01 rna ? GO:0001965 ... P38011 36801861
    764727 7zpq:BA (3.47) BS01 rna ? GO:0002181 ... P0CX45 36801861
    764728 7zpq:BA (3.47) BS02 rna ? GO:0002181 ... P0CX45 36801861
    764729 7zpq:BB (3.47) BS01 rna ? GO:0000027 ... P14126 36801861
    764730 7zpq:BC (3.47) BS01 rna ? GO:0002181 ... P10664 36801861
    764731 7zpq:BC (3.47) BS02 rna ? GO:0002181 ... P10664 36801861
    764732 7zpq:BD (3.47) BS01 rna ? GO:0000027 ... P26321 36801861
    764733 7zpq:BD (3.47) BS02 rna ? GO:0000027 ... P26321 36801861
    764734 7zpq:BE (3.47) BS01 rna ? GO:0000027 ... P05739 36801861
    764735 7zpq:BF (3.47) BS01 rna ? GO:0000463 ... P05737 36801861
    764736 7zpq:BF (3.47) BS02 rna ? GO:0000463 ... P05737 36801861
    764737 7zpq:BG (3.47) BS01 rna ? GO:0000470 ... P17076 36801861
    764738 7zpq:BG (3.47) BS02 rna ? GO:0000470 ... P17076 36801861
    764739 7zpq:BH (3.47) BS01 rna ? GO:0002181 ... P05738 36801861
    764740 7zpq:BI (3.47) BS01 rna ? GO:0000027 ... P41805 36801861
    764741 7zpq:BI (3.47) BS02 rna ? GO:0000027 ... P41805 36801861
    764742 7zpq:BJ (3.47) BS01 rna ? GO:0000027 ... Q3E757 36801861
    764743 7zpq:BJ (3.47) BS02 rna ? GO:0000027 ... Q3E757 36801861
    764744 7zpq:BJ (3.47) BS03 rna ? GO:0000027 ... Q3E757 36801861
    764745 7zpq:BK (3.47) BS01 rna ? GO:0002181 ... Q12690 36801861
    764746 7zpq:BK (3.47) BS02 rna ? GO:0002181 ... Q12690 36801861
    764747 7zpq:BL (3.47) BS01 rna ? GO:0000027 ... P36105 36801861
    764748 7zpq:BM (3.47) BS01 rna ? GO:0000470 ... P05748 36801861
    764749 7zpq:BM (3.47) BS02 rna ? GO:0000470 ... P05748 36801861
    764750 7zpq:BN (3.47) BS01 rna ? GO:0000470 ... P26784 36801861
    764751 7zpq:BO (3.47) BS01 rna ? GO:0000448 ... P05740 36801861
    764752 7zpq:BO (3.47) BS02 rna ? GO:0000448 ... P05740 36801861
    764753 7zpq:BP (3.47) BS01 rna ? GO:0002181 ... P0CX49 36801861
    764754 7zpq:BQ (3.47) BS01 rna ? GO:0002181 ... P0CX82 36801861
    764755 7zpq:BQ (3.47) BS02 rna ? GO:0002181 ... P0CX82 36801861
    764756 7zpq:BR (3.47) BS01 rna ? GO:0002181 ... P0CX23 36801861
    764757 7zpq:BR (3.47) BS02 rna ? GO:0002181 ... P0CX23 36801861
    764758 7zpq:BS (3.47) BS01 rna ? GO:0002181 ... Q02753 36801861
    764759 7zpq:BS (3.47) BS02 rna ? GO:0002181 ... Q02753 36801861
    764760 7zpq:BT (3.47) BS01 rna ? GO:0003735 ... P05749 36801861
    764761 7zpq:BU (3.47) BS01 rna ? GO:0002181 ... P0CX41 36801861
    764762 7zpq:BV (3.47) BS01 rna ? GO:0003735 ... P04449 36801861
    764763 7zpq:BW (3.47) BS01 rna ? GO:0003735 ... P04456 36801861
    764764 7zpq:BW (3.47) BS02 rna ? GO:0003735 ... P04456 36801861
    764765 7zpq:BX (3.47) BS01 rna ? GO:0002181 ... P05743 36801861
    764766 7zpq:BX (3.47) BS02 rna ? GO:0002181 ... P05743 36801861
    764767 7zpq:BY (3.47) BS01 rna ? GO:0002181 ... P0C2H6 36801861
    764768 7zpq:BZ (3.47) BS01 rna ? GO:0002181 ... P02406 36801861
    764769 7zpq:Ba (3.47) BS01 rna ? GO:0002181 ... P05747 36801861
    764770 7zpq:Bb (3.47) BS01 rna ? GO:0002181 ... P14120 36801861
    764771 7zpq:Bc (3.47) BS01 rna ? GO:0002181 ... P0C2H8 36801861
    764772 7zpq:Bd (3.47) BS01 rna ? GO:0002181 ... P38061 36801861
    764773 7zpq:Be (3.47) BS01 rna ? GO:0000027 ... P05744 36801861
    764774 7zpq:Bf (3.47) BS01 rna ? GO:0002181 ... P87262 36801861
    764775 7zpq:Bf (3.47) BS02 ZN ? GO:0002181 ... P87262 36801861
    764776 7zpq:Bg (3.47) BS01 rna ? GO:0000463 ... P0CX84 36801861
    764777 7zpq:Bg (3.47) BS02 rna ? GO:0000463 ... P0CX84 36801861
    764778 7zpq:Bh (3.47) BS01 rna ? GO:0000470 ... P05745 36801861
    764779 7zpq:Bi (3.47) BS01 rna ? GO:0000448 ... P49166 36801861
    764780 7zpq:Bi (3.47) BS02 rna ? GO:0000448 ... P49166 36801861
    764781 7zpq:Bi (3.47) BS03 ZN ? GO:0000448 ... P49166 36801861
    764782 7zpq:Bj (3.47) BS01 rna ? GO:0002181 ... P49167 36801861
    764783 7zpq:Bk (3.47) BS01 rna ? GO:0002181 ... P04650 36801861
    764784 7zpq:Bk (3.47) BS02 rna ? GO:0002181 ... P04650 36801861
    764785 7zpq:Bl (3.47) BS01 rna ? GO:0003735 ... P0CH08 36801861
    764786 7zpq:Bl (3.47) BS02 ZN ? GO:0003735 ... P0CH08 36801861
    764787 7zpq:Bn (3.47) BS01 rna ? GO:0002181 ... P0CX27 36801861
    764788 7zpq:Bn (3.47) BS02 ZN ? GO:0002181 ... P0CX27 36801861
    764789 7zpq:Bo (3.47) BS01 rna ? GO:0002181 ... P0CX25 36801861
    764790 7zpq:Bo (3.47) BS02 ZN ? GO:0002181 ... P0CX25 36801861
    764791 7zpq:CA (3.47) BS01 rna 3.6.4.13 GO:0002181 ... P53327 36801861
    764792 7zpq:CC (3.47) BS01 ZN ? GO:0003713 ... P36119 36801861
    764793 7zpq:CC (3.47) BS02 ZN ? GO:0003713 ... P36119 36801861
    764794 7zpr:A (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A
    764795 7zpr:B (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A
    764796 7zpr:D (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A
    764797 7zpr:D (3.56) BS02 MG ? GO:0005886 ... O87952 N/A
    764798 7zpr:E (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A
    764799 7zpr:F (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A
    764800 7zpr:H (3.56) BS01 ADP ? GO:0005886 ... O87952 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).