SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    764601 8a57:5 (2.3) BS02 ZN ? GO:0003735 ... P66207 36300626
    764602 8a57:6 (2.3) BS01 rna ? GO:0003735 ... P66219 36300626
    764603 8a57:7 (2.3) BS01 rna ? GO:0003735 ... P66248 36300626
    764604 8a57:8 (2.3) BS01 rna ? GO:0003735 ... P0A491 36300626
    764605 8a57:9 (2.3) BS01 rna ? GO:0003735 ... P66290 36300626
    764606 8a57:9 (2.3) BS02 ZN ? GO:0003735 ... P66290 36300626
    764607 8a57:D (2.3) BS01 rna ? GO:0003924 ... Q8Y8Y0 36300626
    764608 8a57:D (2.3) BS02 GNP ? GO:0003924 ... Q8Y8Y0 36300626
    764609 8a57:D (2.3) BS03 MG ? GO:0003924 ... Q8Y8Y0 36300626
    764610 8a57:E (2.3) BS01 rna ? GO:0003735 ... P66054 36300626
    764611 8a57:G (2.3) BS01 rna ? GO:0002181 ... P60426 36300626
    764612 8a57:H (2.3) BS01 rna ? GO:0003735 ... Q8Y440 36300626
    764613 8a57:I (2.3) BS01 rna ? GO:0003735 ... P61055 36300626
    764614 8a57:J (2.3) BS01 rna ? GO:0000049 ... Q927L9 36300626
    764615 8a57:J (2.3) BS02 rna ? GO:0000049 ... Q927L9 36300626
    764616 8a57:K (2.3) BS01 rna ? GO:0002181 ... Q8Y444 36300626
    764617 8a57:M (2.3) BS01 rna ? GO:0003729 ... Q8Y458 36300626
    764618 8a57:N (2.3) BS01 rna ? GO:0003735 ... Q927L7 36300626
    764619 8a57:O (2.3) BS01 rna ? GO:0003735 ... Q8Y447 36300626
    764620 8a57:P (2.3) BS01 rna ? GO:0000049 ... Q927L4 36300626
    764621 8a57:P (2.3) BS02 rna ? GO:0000049 ... Q927L4 36300626
    764622 8a57:Q (2.3) BS01 rna ? GO:0003735 ... Q8Y450 36300626
    764623 8a57:R (2.3) BS01 rna ? GO:0003735 ... Q8Y445 36300626
    764624 8a57:R (2.3) BS02 rna ? GO:0003735 ... Q8Y445 36300626
    764625 8a57:S (2.3) BS01 rna ? GO:0003735 ... O53083 36300626
    764626 8a57:T (2.3) BS01 rna ? GO:0000027 ... P66103 36300626
    764627 8a57:U (2.3) BS01 rna ? GO:0003723 ... Q8Y6Y9 36300626
    764628 8a57:V (2.3) BS01 rna ? GO:0003735 ... Q927L2 36300626
    764629 8a57:W (2.3) BS01 rna ? GO:0003735 ... Q8Y441 36300626
    764630 8a57:X (2.3) BS01 rna ? GO:0003723 ... Q8Y443 36300626
    764631 8a57:Z (2.3) BS01 rna ? GO:0003735 ... P66125 36300626
    764632 8a57:Z (2.3) BS02 rna ? GO:0003735 ... P66125 36300626
    764633 8a58:C (2.25) BS01 ZN 2.3.2.27 GO:0004842 ... P19474 37061529
    764634 8a58:C (2.25) BS02 ZN 2.3.2.27 GO:0004842 ... P19474 37061529
    764635 8a58:D (2.25) BS01 ZN 2.3.2.27 GO:0004842 ... P19474 37061529
    764636 8a58:D (2.25) BS02 ZN 2.3.2.27 GO:0004842 ... P19474 37061529
    764637 8a5a:U (3.3) BS01 ATP ? GO:0003729 ... Q12386 36490333
    764638 8a5a:V (3.3) BS01 ATP 3.6.4.- GO:0000011 ... P60010 36490333
    764639 8a5a:W (3.3) BS01 ATP ? GO:0000785 ... P80428 36490333
    764640 8a5b:A (1.8) BS01 peptide 3.4.22.15 GO:0006508 ... P07711 38630165
    764641 8a5b:B (1.8) BS01 peptide 3.4.22.15 GO:0006508 ... P07711 38630165
    764642 8a5b:C (1.8) BS01 peptide 3.4.22.15 GO:0006508 ... P07711 38630165
    764643 8a5b:D (1.8) BS01 peptide 3.4.22.15 GO:0006508 ... P07711 38630165
    764644 8a5c:A (1.951) BS01 SF4 ? GO:0000703 ... Q9RRQ0 35807515
    764645 8a5c:A (1.951) BS02 MG ? GO:0000703 ... Q9RRQ0 35807515
    764646 8a5d:U (2.9) BS01 AGS ? N/A G0S519 36490333
    764647 8a5d:V (2.9) BS01 AGS ? N/A G0SE15 36490333
    764648 8a5d:W (2.9) BS01 AGS ? N/A G0SBW4 36490333
    764649 8a5e:A (3.4) BS01 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764650 8a5e:A (3.4) BS02 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764651 8a5e:A (3.4) BS03 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764652 8a5e:A (3.4) BS04 FES 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764653 8a5e:A (3.4) BS05 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764654 8a5e:A (3.4) BS06 HC1 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764655 8a5e:B (3.4) BS01 ZN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764656 8a5e:B (3.4) BS02 SF4 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764657 8a5e:B (3.4) BS03 SF4 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764658 8a5e:B (3.4) BS04 FMN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764659 8a5e:B (3.4) BS05 SF4 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764660 8a5e:B (3.4) BS06 NAI 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    764661 8a5e:C (3.4) BS01 FES 1.12.7.2 GO:0008901 ... H6LFG7 36811855
    764662 8a5e:D (3.4) BS01 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764663 8a5e:D (3.4) BS02 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764664 8a5e:D (3.4) BS03 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764665 8a5e:D (3.4) BS04 FES 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764666 8a5e:D (3.4) BS05 SF4 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764667 8a5e:D (3.4) BS06 HC1 1.12.7.2 GO:0005506 ... H6LFG3 36811855
    764668 8a5f:A (1.38) BS01 MG ? GO:0000703 ... Q9RRQ0 35807515
    764669 8a5f:A (1.38) BS02 MG ? GO:0000703 ... Q9RRQ0 35807515
    764670 8a5f:A (1.38) BS03 SF4 ? GO:0000703 ... Q9RRQ0 35807515
    764671 8a5g:A (1.89) BS01 SF4 ? GO:0003824 ... Q9RVU4 35807515
    764672 8a5i:1 (2.3) BS01 rna ? GO:0003735 ... P66144 36300626
    764673 8a5i:2 (2.3) BS01 rna ? GO:0003735 ... P66166 36300626
    764674 8a5i:3 (2.3) BS01 rna ? GO:0003735 ... Q927M5 36300626
    764675 8a5i:3 (2.3) BS02 rna ? GO:0003735 ... Q927M5 36300626
    764676 8a5i:4 (2.3) BS01 rna ? GO:0003735 ... P0A485 36300626
    764677 8a5i:5 (2.3) BS01 rna ? GO:0003735 ... P66207 36300626
    764678 8a5i:5 (2.3) BS02 ZN ? GO:0003735 ... P66207 36300626
    764679 8a5i:6 (2.3) BS01 rna ? GO:0003735 ... P66219 36300626
    764680 8a5i:7 (2.3) BS01 rna ? GO:0003735 ... P66248 36300626
    764681 8a5i:8 (2.3) BS01 rna ? GO:0003735 ... P0A491 36300626
    764682 8a5i:9 (2.3) BS01 rna ? GO:0003735 ... P66290 36300626
    764683 8a5i:9 (2.3) BS02 ZN ? GO:0003735 ... P66290 36300626
    764684 8a5i:G (2.3) BS01 rna ? GO:0002181 ... P60426 36300626
    764685 8a5i:H (2.3) BS01 rna ? GO:0003735 ... Q8Y440 36300626
    764686 8a5i:I (2.3) BS01 rna ? GO:0003735 ... P61055 36300626
    764687 8a5i:J (2.3) BS01 rna ? GO:0000049 ... Q927L9 36300626
    764688 8a5i:J (2.3) BS02 rna ? GO:0000049 ... Q927L9 36300626
    764689 8a5i:K (2.3) BS01 rna ? GO:0002181 ... Q8Y444 36300626
    764690 8a5i:M (2.3) BS01 rna ? GO:0003729 ... Q8Y458 36300626
    764691 8a5i:N (2.3) BS01 rna ? GO:0003735 ... Q927L7 36300626
    764692 8a5i:O (2.3) BS01 rna ? GO:0003735 ... Q8Y447 36300626
    764693 8a5i:P (2.3) BS01 rna ? GO:0000049 ... Q927L4 36300626
    764694 8a5i:P (2.3) BS02 rna ? GO:0000049 ... Q927L4 36300626
    764695 8a5i:Q (2.3) BS01 rna ? GO:0003735 ... Q8Y450 36300626
    764696 8a5i:R (2.3) BS01 rna ? GO:0003735 ... Q8Y445 36300626
    764697 8a5i:R (2.3) BS02 rna ? GO:0003735 ... Q8Y445 36300626
    764698 8a5i:S (2.3) BS01 rna ? GO:0003735 ... O53083 36300626
    764699 8a5i:T (2.3) BS01 rna ? GO:0000027 ... P66103 36300626
    764700 8a5i:U (2.3) BS01 rna ? GO:0003723 ... Q8Y6Y9 36300626
    764701 8a5i:V (2.3) BS01 rna ? GO:0003735 ... Q927L2 36300626
    764702 8a5i:W (2.3) BS01 rna ? GO:0003735 ... Q8Y441 36300626
    764703 8a5i:X (2.3) BS01 rna ? GO:0003723 ... Q8Y443 36300626
    764704 8a5i:Z (2.3) BS01 rna ? GO:0003735 ... P66125 36300626
    764705 8a5i:Z (2.3) BS02 rna ? GO:0003735 ... P66125 36300626
    764706 8a5j:A (2.123) BS01 5BS 2.7.11.1 GO:0004672 ... Q13043 N/A
    764707 8a5j:B (2.123) BS01 5BS 2.7.11.1 GO:0004672 ... Q13043 N/A
    764708 8a5k:A (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764709 8a5k:A (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764710 8a5k:B (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764711 8a5k:B (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764712 8a5k:B (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764713 8a5k:C (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764714 8a5k:C (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764715 8a5k:C (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764716 8a5k:D (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764717 8a5k:D (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764718 8a5k:D (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764719 8a5k:E (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764720 8a5k:E (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764721 8a5k:F (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764722 8a5k:F (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764723 8a5k:F (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764724 8a5k:F (2.3) BS04 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    764725 8a5l:A (1.622) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    764726 8a5m:A (2.918) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    764727 8a5m:B (2.918) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    764728 8a5n:AAA (1.52) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36714262
    764729 8a5n:AAA (1.52) BS02 MG 1.16.3.1 GO:0004322 ... P02794 36714262
    764730 8a5n:AAA (1.52) BS03 MG 1.16.3.1 GO:0004322 ... P02794 36714262
    764731 8a5o:U (3.2) BS01 AGS ? GO:0003729 ... Q12386 36490333
    764732 8a5o:V (3.2) BS01 AGS 3.6.4.- GO:0000011 ... P60010 36490333
    764733 8a5o:W (3.2) BS01 AGS ? GO:0000785 ... P80428 36490333
    764734 8a5p:G (3.4) BS01 dna N/A GO:0003677 ... N/A 36490333
    764735 8a5p:G (3.4) BS02 dna N/A GO:0003677 ... N/A 36490333
    764736 8a5p:U (3.4) BS01 dna ? N/A G0S519 36490333
    764737 8a5p:U (3.4) BS02 ATP ? N/A G0S519 36490333
    764738 8a5p:V (3.4) BS01 ATP ? N/A G0SE15 36490333
    764739 8a5p:W (3.4) BS01 ATP ? N/A G0SBW4 36490333
    764740 8a5q:G (3.3) BS01 dna N/A GO:0003677 ... N/A 36490333
    764741 8a5q:G (3.3) BS02 dna N/A GO:0003677 ... N/A 36490333
    764742 8a5q:U (3.3) BS01 dna ? N/A G0S519 36490333
    764743 8a5q:U (3.3) BS02 ATP ? N/A G0S519 36490333
    764744 8a5q:V (3.3) BS01 ATP ? N/A G0SE15 36490333
    764745 8a5q:W (3.3) BS01 ATP ? N/A G0SBW4 36490333
    764746 8a5r:AAA (1.85) BS01 FMN ? GO:0000166 ... Q2NB98 N/A
    764747 8a5s:AAA (1.85) BS01 FMN ? GO:0000166 ... Q2NB98 N/A
    764748 8a5v:A (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764749 8a5v:B (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764750 8a5v:C (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764751 8a5v:E (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764752 8a5v:F (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764753 8a5v:G (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764754 8a5v:H (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764755 8a5v:H (2.46) BS02 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764756 8a5w:A (2.78) BS01 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764757 8a5w:A (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764758 8a5w:A (2.78) BS03 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764759 8a5w:B (2.78) BS01 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764760 8a5w:B (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764761 8a5w:B (2.78) BS03 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764762 8a5w:C (2.78) BS01 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764763 8a5w:C (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764764 8a5w:D (2.78) BS01 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764765 8a5w:D (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764766 8a5w:E (2.78) BS01 U93 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764767 8a5w:E (2.78) BS02 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764768 8a5w:F (2.78) BS01 U93 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764769 8a5w:F (2.78) BS02 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764770 8a5w:H (2.78) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    764771 8a5x:A (2.4) BS01 L6A 2.7.1.67
    3.2.1.17    		 GO:0003796 ... P00720
    Q8TCG2    		 36184029
    764772 8a5y:U (4.9) BS01 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    764773 8a5y:U (4.9) BS02 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    764774 8a5y:U (4.9) BS03 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    764775 8a5z:A (2.31) BS01 NAP ? GO:0000166 ... A0A0L8BGL4 36776386
    764776 8a5z:B (2.31) BS01 NAP ? GO:0000166 ... A0A0L8BGL4 36776386
    764777 8a5z:B (2.31) BS02 NAP ? GO:0000166 ... A0A0L8BGL4 36776386
    764778 8a62:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37252362
    764779 8a62:A (1.6) BS02 L7L ? GO:0000122 ... P31947 37252362
    764780 8a63:1 (3.1) BS01 rna ? GO:0003735 ... P66144 36300626
    764781 8a63:2 (3.1) BS01 rna ? GO:0003735 ... P66166 36300626
    764782 8a63:3 (3.1) BS01 rna ? GO:0003735 ... Q927M5 36300626
    764783 8a63:3 (3.1) BS02 rna ? GO:0003735 ... Q927M5 36300626
    764784 8a63:4 (3.1) BS01 rna ? GO:0003735 ... P0A485 36300626
    764785 8a63:5 (3.1) BS01 rna ? GO:0003735 ... P66207 36300626
    764786 8a63:5 (3.1) BS02 ZN ? GO:0003735 ... P66207 36300626
    764787 8a63:6 (3.1) BS01 rna ? GO:0003735 ... P66219 36300626
    764788 8a63:7 (3.1) BS01 rna ? GO:0003735 ... P66248 36300626
    764789 8a63:8 (3.1) BS01 rna ? GO:0003735 ... P0A491 36300626
    764790 8a63:9 (3.1) BS01 rna ? GO:0003735 ... P66290 36300626
    764791 8a63:9 (3.1) BS02 ZN ? GO:0003735 ... P66290 36300626
    764792 8a63:G (3.1) BS01 rna ? GO:0002181 ... P60426 36300626
    764793 8a63:H (3.1) BS01 rna ? GO:0003735 ... Q8Y440 36300626
    764794 8a63:I (3.1) BS01 rna ? GO:0003735 ... P61055 36300626
    764795 8a63:J (3.1) BS01 rna ? GO:0000049 ... Q927L9 36300626
    764796 8a63:J (3.1) BS02 rna ? GO:0000049 ... Q927L9 36300626
    764797 8a63:K (3.1) BS01 rna ? GO:0002181 ... Q8Y444 36300626
    764798 8a63:M (3.1) BS01 rna ? GO:0003729 ... Q8Y458 36300626
    764799 8a63:N (3.1) BS01 rna ? GO:0003735 ... Q927L7 36300626
    764800 8a63:O (3.1) BS01 rna ? GO:0003735 ... Q8Y447 36300626
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).