SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    76401 2c9f:D (16.5) BS02 peptide ? GO:0005198 ... P03276 16375921
    76402 2c9f:E (16.5) BS01 peptide ? GO:0005198 ... P03276 16375921
    76403 2c9f:E (16.5) BS02 peptide ? GO:0005198 ... P03276 16375921
    76404 2c9l:Y (2.25) BS01 dna ? GO:0003700 ... P03206 16483937
    76405 2c9l:Y (2.25) BS02 dna ? GO:0003700 ... P03206 16483937
    76406 2c9l:Z (2.25) BS01 dna ? GO:0003700 ... P03206 16483937
    76407 2c9l:Z (2.25) BS02 dna ? GO:0003700 ... P03206 16483937
    76408 2c9m:A (3.0) BS01 CA 7.2.2.10 GO:0000166 ... P04191 16710301
    76409 2c9m:A (3.0) BS02 CA 7.2.2.10 GO:0000166 ... P04191 16710301
    76410 2c9m:B (3.0) BS01 CA 7.2.2.10 GO:0000166 ... P04191 16710301
    76411 2c9m:B (3.0) BS02 CA 7.2.2.10 GO:0000166 ... P04191 16710301
    76412 2c9n:Y (3.3) BS01 dna ? GO:0003700 ... P03206 16483937
    76413 2c9n:Y (3.3) BS02 dna ? GO:0003700 ... P03206 16483937
    76414 2c9n:Z (3.3) BS01 dna ? GO:0003700 ... P03206 16483937
    76415 2c9n:Z (3.3) BS02 dna ? GO:0003700 ... P03206 16483937
    76416 2c9o:A (2.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 17060327
    76417 2c9o:B (2.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 17060327
    76418 2c9o:C (2.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 17060327
    76419 2c9p:A (2.25) BS01 CU ? GO:0005507 ... P12376 16637653
    76420 2c9p:A (2.25) BS02 CU ? GO:0005507 ... P12376 16637653
    76421 2c9p:A (2.25) BS03 CU ? GO:0005507 ... P12376 16637653
    76422 2c9p:B (2.25) BS01 CU ? GO:0005507 ... P12376 16637653
    76423 2c9p:B (2.25) BS02 CU ? GO:0005507 ... P12376 16637653
    76424 2c9p:B (2.25) BS03 CU ? GO:0005507 ... P12376 16637653
    76425 2c9p:C (2.25) BS01 CU ? GO:0005507 ... P12376 16637653
    76426 2c9p:C (2.25) BS02 CU ? GO:0005507 ... P12376 16637653
    76427 2c9q:A (1.6) BS01 CU ? GO:0005507 ... P12376 16637653
    76428 2c9q:A (1.6) BS02 CU ? GO:0005507 ... P12376 16637653
    76429 2c9s:A (1.24) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76430 2c9s:A (1.24) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76431 2c9s:A (1.24) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76432 2c9s:F (1.24) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76433 2c9s:F (1.24) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76434 2c9s:F (1.24) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76435 2c9t:A (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76436 2c9t:A (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76437 2c9t:B (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76438 2c9t:C (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76439 2c9t:D (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76440 2c9t:E (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76441 2c9t:F (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76442 2c9t:F (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76443 2c9t:G (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76444 2c9t:G (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76445 2c9t:H (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76446 2c9t:H (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76447 2c9t:I (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76448 2c9t:I (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76449 2c9t:J (2.25) BS01 peptide ? GO:0004888 ... Q8WSF8 16505382
    76450 2c9t:J (2.25) BS02 peptide ? GO:0004888 ... Q8WSF8 16505382
    76451 2c9u:A (1.24) BS01 CU 1.15.1.1 GO:0000303 ... P00441 16406071
    76452 2c9u:A (1.24) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76453 2c9u:A (1.24) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76454 2c9u:F (1.24) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76455 2c9u:F (1.24) BS02 CU 1.15.1.1 GO:0000303 ... P00441 16406071
    76456 2c9u:F (1.24) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76457 2c9v:A (1.07) BS01 CU 1.15.1.1 GO:0000303 ... P00441 16406071
    76458 2c9v:A (1.07) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76459 2c9v:F (1.07) BS01 CU 1.15.1.1 GO:0000303 ... P00441 16406071
    76460 2c9v:F (1.07) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 16406071
    76461 2c9x:A (1.8) BS01 MSS ? GO:0006790 ... Q9LA16 16893171
    76462 2c9x:A (1.8) BS02 HEC ? GO:0006790 ... Q9LA16 16893171
    76463 2c9x:B (1.8) BS01 HEC ? GO:0009055 ... Q9LA15 16893171
    76464 2c9y:A (2.1) BS01 B4P 2.7.4.3 GO:0004017 ... P54819 N/A
    76465 2c9z:A (2.1) BS01 UDP 2.4.1.115
    2.4.1.91
    GO:0008194 ... P51094 16482224
    76466 2c9z:A (2.1) BS02 QUE 2.4.1.115
    2.4.1.91
    GO:0008194 ... P51094 16482224
    76467 2ca0:A (2.85) BS01 HEM 1.14.15.33 GO:0004497 ... O87605 N/A
    76468 2ca0:A (2.85) BS02 PXI 1.14.15.33 GO:0004497 ... O87605 N/A
    76469 2ca0:B (2.85) BS01 HEM 1.14.15.33 GO:0004497 ... O87605 N/A
    76470 2ca0:B (2.85) BS02 PXI 1.14.15.33 GO:0004497 ... O87605 N/A
    76471 2ca2:A (1.9) BS01 HG 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 3151020
    76472 2ca2:A (1.9) BS02 SCN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 3151020 BindingDB: Ki=1600000nM
    76473 2ca2:A (1.9) BS03 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 3151020
    76474 2ca3:A (2.0) BS01 MSS ? GO:0006790 ... Q9LA16 19004819
    76475 2ca3:A (2.0) BS02 SO4 ? GO:0006790 ... Q9LA16 19004819
    76476 2ca3:B (2.0) BS01 HEC ? GO:0009055 ... Q9LA15 19004819
    76477 2ca4:A (2.1) BS01 MSS ? GO:0006790 ... Q9LA16 19004819
    76478 2ca4:A (2.1) BS02 HEC ? GO:0006790 ... Q9LA16 19004819
    76479 2ca4:B (2.1) BS01 HEC ? GO:0009055 ... Q9LA15 19004819
    76480 2ca8:A (2.49) BS01 GSH 2.5.1.18 GO:0004364 ... P30113 16777141 MOAD: Kd=22uM
    76481 2cab:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00915 6430186
    76482 2cad:A (2.3) BS01 NI ? GO:0000976 ... O25896 16872629
    76483 2cad:B (2.3) BS01 NI ? GO:0000976 ... O25896 16872629
    76484 2cad:B (2.3) BS02 NI ? GO:0000976 ... O25896 16872629
    76485 2cag:A (2.7) BS01 HEM 1.11.1.6 GO:0004096 ... P42321 8901874
    76486 2cah:A (2.7) BS01 HEM 1.11.1.6 GO:0004096 ... P42321 7791219
    76487 2cah:A (2.7) BS02 NDP 1.11.1.6 GO:0004096 ... P42321 7791219
    76488 2cak:A (1.27) BS01 CU1 ? GO:0005507 ... P0C918 16503647
    76489 2cal:A (1.1) BS01 CU1 ? GO:0005507 ... P0C918 16503647
    76490 2can:A (2.3) BS01 CAN 2.6.1.13 GO:0004587 ... P04181 9309222
    76491 2can:A (2.3) BS02 PLP 2.6.1.13 GO:0004587 ... P04181 9309222
    76492 2can:A (2.3) BS03 CAN 2.6.1.13 GO:0004587 ... P04181 9309222
    76493 2can:B (2.3) BS01 CAN 2.6.1.13 GO:0004587 ... P04181 9309222
    76494 2can:B (2.3) BS02 CAN 2.6.1.13 GO:0004587 ... P04181 9309222
    76495 2can:B (2.3) BS03 PLP 2.6.1.13 GO:0004587 ... P04181 9309222
    76496 2can:C (2.3) BS01 CAN 2.6.1.13 GO:0004587 ... P04181 9309222
    76497 2can:C (2.3) BS02 PLP 2.6.1.13 GO:0004587 ... P04181 9309222
    76498 2caq:A (2.0) BS01 GSH 2.5.1.18 GO:0004364 ... P30113 16777141 MOAD: Kd=285uM
    76499 2cax:A (2.9) BS01 dna ? GO:0006355 ... Q57468 16528102
    76500 2cax:B (2.9) BS01 dna ? GO:0006355 ... Q57468 16528102
    76501 2cax:B (2.9) BS02 dna ? GO:0006355 ... Q57468 16528102
    76502 2cax:C (2.9) BS01 dna ? GO:0006355 ... Q57468 16528102
    76503 2cax:C (2.9) BS02 dna ? GO:0006355 ... Q57468 16528102
    76504 2cax:D (2.9) BS01 dna ? GO:0006355 ... Q57468 16528102
    76505 2cax:D (2.9) BS02 dna ? GO:0006355 ... Q57468 16528102
    76506 2cb1:A (2.0) BS01 PLP 2.5.1.- GO:0003824 ... Q5SJ58 N/A
    76507 2cb2:A (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76508 2cb2:B (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76509 2cb2:C (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76510 2cb2:D (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76511 2cb2:E (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76512 2cb2:F (1.7) BS01 FE 1.13.11.55 GO:0005737 ... P29082 16484493
    76513 2cb3:A (2.4) BS01 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76514 2cb3:A (2.4) BS02 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76515 2cb3:B (2.4) BS01 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76516 2cb3:B (2.4) BS02 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76517 2cb3:C (2.4) BS01 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76518 2cb3:D (2.4) BS01 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76519 2cb3:D (2.4) BS02 MLD ? GO:0008270 ... Q9VXN9 16428381 MOAD: Kd=27nM
    76520 2cb8:A (1.4) BS01 MYA ? GO:0000062 ... P07108 17044054
    76521 2cb8:A (1.4) BS02 ZN ? GO:0000062 ... P07108 17044054
    76522 2cb8:A (1.4) BS03 MYA ? GO:0000062 ... P07108 17044054
    76523 2cb8:A (1.4) BS04 MYA ? GO:0000062 ... P07108 17044054
    76524 2cb8:B (1.4) BS01 MYA ? GO:0000062 ... P07108 17044054 MOAD: Kd=2.5nM
    76525 2cb8:B (1.4) BS02 MYA ? GO:0000062 ... P07108 17044054 MOAD: Kd=2.5nM
    76526 2cb8:B (1.4) BS03 ZN ? GO:0000062 ... P07108 17044054
    76527 2cba:A (1.54) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1433293
    76528 2cbb:A (1.67) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1433293
    76529 2cbc:A (1.88) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1433293
    76530 2cbd:A (1.67) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1433293
    76531 2cbd:A (1.67) BS02 SO3 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 1433293
    76532 2cbf:A (3.1) BS01 SAH 2.1.1.271 GO:0008168 ... O87696 9665173
    76533 2cbi:A (2.25) BS01 GBL 3.2.1.169 N/A Q0TR53 16541109
    76534 2cbi:B (2.25) BS01 ZN 3.2.1.169 N/A Q0TR53 16541109
    76535 2cbi:B (2.25) BS02 GBL 3.2.1.169 N/A Q0TR53 16541109
    76536 2cbj:A (2.35) BS01 OAN 3.2.1.169 N/A Q0TR53 16541109 MOAD: Ki=5.4nM
    76537 2cbj:A (2.35) BS02 OAN 3.2.1.169 N/A Q0TR53 16541109 MOAD: Ki=5.4nM
    76538 2cbj:B (2.35) BS01 OAN 3.2.1.169 N/A Q0TR53 16541109 MOAD: Ki=5.4nM
    76539 2cbj:B (2.35) BS02 OAN 3.2.1.169 N/A Q0TR53 16541109 MOAD: Ki=5.4nM
    76540 2cbl:A (2.1) BS01 peptide 2.3.2.27 GO:0001784 ... P22681 10078535
    76541 2cbl:A (2.1) BS02 CA 2.3.2.27 GO:0001784 ... P22681 10078535
    76542 2cbn:A (2.9) BS01 ZN 3.1.-.- GO:0004518 ... P0A8V0 16452444
    76543 2cbn:A (2.9) BS02 ZN 3.1.-.- GO:0004518 ... P0A8V0 16452444
    76544 2cbo:A (1.7) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771 MOAD: Kd=40.15uM
    76545 2cbo:A (1.7) BS02 TH2 ? GO:0003677 ... P0A3R9 16529771 MOAD: Kd=40.15uM
    76546 2cbp:A (1.8) BS01 CU ? GO:0009055 ... P00303 8876647
    76547 2cbq:A (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76548 2cbq:A (2.6) BS02 TH2 ? GO:0003677 ... P0A3R9 16529771
    76549 2cbq:B (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76550 2cbq:B (2.6) BS02 TH2 ? GO:0003677 ... P0A3R9 16529771
    76551 2cbq:C (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76552 2cbq:C (2.6) BS02 TH2 ? GO:0003677 ... P0A3R9 16529771
    76553 2cbq:D (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76554 2cbq:E (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76555 2cbq:F (2.6) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76556 2cbq:F (2.6) BS02 TH2 ? GO:0003677 ... P0A3R9 16529771
    76557 2cbr:A (2.8) BS01 A80 ? GO:0001972 ... P62964 10531482
    76558 2cbs:A (2.1) BS01 R13 ? GO:0001972 ... P29373 10531482 MOAD: ic50=6nM
    76559 2cbt:A (2.2) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76560 2cbt:B (2.2) BS01 TH2 ? GO:0003677 ... P0A3R9 16529771
    76561 2cbu:A (1.85) BS01 CTS 3.2.1.21 GO:0004553 ... Q08638 16628756 MOAD: Kd=2.1uM
    76562 2cbu:B (1.85) BS01 CTS 3.2.1.21 GO:0004553 ... Q08638 16628756 MOAD: Kd=2.1uM
    76563 2cbu:B (1.85) BS02 CA 3.2.1.21 GO:0004553 ... Q08638 16628756
    76564 2cbv:A (1.95) BS01 CGB 3.2.1.21 GO:0004553 ... Q08638 16628756 MOAD: Kd=3.3uM
    76565 2cbv:B (1.95) BS01 CGB 3.2.1.21 GO:0004553 ... Q08638 16628756 MOAD: Kd=3.3uM
    76566 2cbx:A (2.0) BS01 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76567 2cbx:A (2.0) BS02 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76568 2cbx:B (2.0) BS01 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76569 2cbx:B (2.0) BS02 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76570 2cbx:C (2.0) BS01 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76571 2cbx:C (2.0) BS02 CC5 2.5.1.63 GO:0033846 ... Q70GK9 16604208
    76572 2cbz:A (1.5) BS01 MG 7.6.2.2
    7.6.2.3
    GO:0005524 ... P33527 16697012
    76573 2cbz:A (1.5) BS02 ATP 7.6.2.2
    7.6.2.3
    GO:0005524 ... P33527 16697012 MOAD: Kd=118uM
    76574 2cc0:A (1.6) BS01 ZN 3.1.1.72 GO:0005975 ... Q54413 16431911
    76575 2cc0:B (1.6) BS01 ZN 3.1.1.72 GO:0005975 ... Q54413 16431911
    76576 2cc8:A (1.9) BS01 RBF ? GO:0005829 ... B0R5M0 16460756 MOAD: Kd=35.76nM
    76577 2cca:A (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... P9WIE5 16566587
    76578 2cca:B (2.0) BS01 HEM 1.11.1.21 GO:0004096 ... P9WIE5 16566587
    76579 2ccb:A (1.65) BS01 RBF ? GO:0005829 ... B0R5M0 16460756 MOAD: Kd=35.76nM
    76580 2ccd:A (2.1) BS01 HEM 1.11.1.21 GO:0004096 ... P9WIE5 16566587
    76581 2ccd:B (2.1) BS01 HEM 1.11.1.21 GO:0004096 ... P9WIE5 16566587
    76582 2ccg:A (2.3) BS01 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76583 2ccg:B (2.3) BS01 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76584 2ccg:B (2.3) BS02 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76585 2cch:A (1.7) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 16707497
    76586 2cch:B (1.7) BS01 peptide ? GO:0016538 ... P20248 16707497
    76587 2cch:C (1.7) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 16707497
    76588 2cch:D (1.7) BS01 peptide ? GO:0016538 ... P20248 16707497
    76589 2cci:A (2.7) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 16707497
    76590 2cci:A (2.7) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 16707497
    76591 2cci:A (2.7) BS03 MG 2.7.11.22 GO:0000082 ... P24941 16707497
    76592 2cci:B (2.7) BS01 peptide ? GO:0016538 ... P20248 16707497
    76593 2cci:C (2.7) BS01 peptide 2.7.11.22 GO:0000082 ... P24941 16707497
    76594 2cci:C (2.7) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 16707497
    76595 2cci:C (2.7) BS03 MG 2.7.11.22 GO:0000082 ... P24941 16707497
    76596 2cci:D (2.7) BS01 peptide ? GO:0016538 ... P20248 16707497
    76597 2ccj:A (1.7) BS01 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76598 2ccj:B (1.7) BS01 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76599 2ccj:B (1.7) BS02 TMP 2.7.4.9 GO:0004798 ... P65248 16522804
    76600 2ccl:B (2.03) BS01 CA 3.2.1.8 GO:0000272 ... P51584 17360613

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).