SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    768801 8a5i:X (2.3) BS01 rna ? GO:0003723 ... Q8Y443 36300626
    768802 8a5i:Z (2.3) BS01 rna ? GO:0003735 ... P66125 36300626
    768803 8a5i:Z (2.3) BS02 rna ? GO:0003735 ... P66125 36300626
    768804 8a5j:A (2.123) BS01 5BS 2.7.11.1 GO:0004672 ... Q13043 N/A
    768805 8a5j:B (2.123) BS01 5BS 2.7.11.1 GO:0004672 ... Q13043 N/A
    768806 8a5k:A (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768807 8a5k:A (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768808 8a5k:B (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768809 8a5k:B (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768810 8a5k:B (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768811 8a5k:C (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768812 8a5k:C (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768813 8a5k:C (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768814 8a5k:D (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768815 8a5k:D (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768816 8a5k:D (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768817 8a5k:E (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768818 8a5k:E (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768819 8a5k:F (2.3) BS01 TPP 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768820 8a5k:F (2.3) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768821 8a5k:F (2.3) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768822 8a5k:F (2.3) BS04 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768823 8a5l:A (1.622) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    768824 8a5m:A (2.918) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    768825 8a5m:B (2.918) BS01 peptide 2.3.2.27 N/A Q9C029 35893676
    768826 8a5n:AAA (1.52) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36714262
    768827 8a5n:AAA (1.52) BS02 MG 1.16.3.1 GO:0004322 ... P02794 36714262
    768828 8a5n:AAA (1.52) BS03 MG 1.16.3.1 GO:0004322 ... P02794 36714262
    768829 8a5o:U (3.2) BS01 AGS ? GO:0003729 ... Q12386 36490333
    768830 8a5o:V (3.2) BS01 AGS 3.6.4.- GO:0000011 ... P60010 36490333
    768831 8a5o:W (3.2) BS01 AGS ? GO:0000785 ... P80428 36490333
    768832 8a5p:G (3.4) BS01 dna N/A GO:0003677 ... N/A 36490333
    768833 8a5p:G (3.4) BS02 dna N/A GO:0003677 ... N/A 36490333
    768834 8a5p:U (3.4) BS01 dna ? N/A G0S519 36490333
    768835 8a5p:U (3.4) BS02 ATP ? N/A G0S519 36490333
    768836 8a5p:V (3.4) BS01 ATP ? N/A G0SE15 36490333
    768837 8a5p:W (3.4) BS01 ATP ? GO:0005634 ... G0SBW4 36490333
    768838 8a5q:G (3.3) BS01 dna N/A GO:0003677 ... N/A 36490333
    768839 8a5q:G (3.3) BS02 dna N/A GO:0003677 ... N/A 36490333
    768840 8a5q:U (3.3) BS01 dna ? N/A G0S519 36490333
    768841 8a5q:U (3.3) BS02 ATP ? N/A G0S519 36490333
    768842 8a5q:V (3.3) BS01 ATP ? N/A G0SE15 36490333
    768843 8a5q:W (3.3) BS01 ATP ? GO:0005634 ... G0SBW4 36490333
    768844 8a5r:AAA (1.85) BS01 FMN ? GO:0003677 ... Q2NB98 40119733
    768845 8a5s:AAA (1.85) BS01 FMN ? GO:0003677 ... Q2NB98 40119733
    768846 8a5v:A (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768847 8a5v:B (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768848 8a5v:C (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768849 8a5v:E (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768850 8a5v:F (2.46) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768851 8a5v:G (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768852 8a5v:H (2.46) BS01 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768853 8a5v:H (2.46) BS02 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768854 8a5w:A (2.78) BS01 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768855 8a5w:A (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768856 8a5w:A (2.78) BS03 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768857 8a5w:B (2.78) BS01 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768858 8a5w:B (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768859 8a5w:B (2.78) BS03 PMP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768860 8a5w:C (2.78) BS01 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768861 8a5w:C (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768862 8a5w:D (2.78) BS01 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768863 8a5w:D (2.78) BS02 SEP 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768864 8a5w:E (2.78) BS01 U93 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768865 8a5w:E (2.78) BS02 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768866 8a5w:F (2.78) BS01 U93 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768867 8a5w:F (2.78) BS02 E1U 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768868 8a5w:H (2.78) BS01 SO4 2.6.1.52 GO:0004648 ... Q9Y617 36851825
    768869 8a5x:A (2.4) BS01 L6A 2.7.1.67
    3.2.1.17
    GO:0003796 ... P00720
    Q8TCG2
    36184029
    768870 8a5y:U (4.9) BS01 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768871 8a5y:U (4.9) BS02 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768872 8a5y:U (4.9) BS03 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768873 8a5z:A (2.31) BS01 NAP ? GO:0016491 ... A0A0L8BGL4 36776386
    768874 8a5z:B (2.31) BS01 NAP ? GO:0016491 ... A0A0L8BGL4 36776386
    768875 8a5z:B (2.31) BS02 NAP ? GO:0016491 ... A0A0L8BGL4 36776386
    768876 8a62:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37252362
    768877 8a62:A (1.6) BS02 L7L ? GO:0001836 ... P31947 37252362
    768878 8a63:1 (3.1) BS01 rna ? GO:0003735 ... P66144 36300626
    768879 8a63:2 (3.1) BS01 rna ? GO:0003735 ... P66166 36300626
    768880 8a63:3 (3.1) BS01 rna ? GO:0003735 ... Q927M5 36300626
    768881 8a63:3 (3.1) BS02 rna ? GO:0003735 ... Q927M5 36300626
    768882 8a63:4 (3.1) BS01 rna ? GO:0003735 ... P0A485 36300626
    768883 8a63:5 (3.1) BS01 rna ? GO:0003735 ... P66207 36300626
    768884 8a63:5 (3.1) BS02 ZN ? GO:0003735 ... P66207 36300626
    768885 8a63:6 (3.1) BS01 rna ? GO:0003735 ... P66219 36300626
    768886 8a63:7 (3.1) BS01 rna ? GO:0003735 ... P66248 36300626
    768887 8a63:8 (3.1) BS01 rna ? GO:0003735 ... P0A491 36300626
    768888 8a63:9 (3.1) BS01 rna ? GO:0003735 ... P66290 36300626
    768889 8a63:9 (3.1) BS02 ZN ? GO:0003735 ... P66290 36300626
    768890 8a63:G (3.1) BS01 rna ? GO:0002181 ... P60426 36300626
    768891 8a63:H (3.1) BS01 rna ? GO:0003735 ... Q8Y440 36300626
    768892 8a63:I (3.1) BS01 rna ? GO:0003735 ... P61055 36300626
    768893 8a63:J (3.1) BS01 rna ? GO:0000049 ... Q927L9 36300626
    768894 8a63:J (3.1) BS02 rna ? GO:0000049 ... Q927L9 36300626
    768895 8a63:K (3.1) BS01 rna ? GO:0002181 ... Q8Y444 36300626
    768896 8a63:M (3.1) BS01 rna ? GO:0003729 ... Q8Y458 36300626
    768897 8a63:N (3.1) BS01 rna ? GO:0003735 ... Q927L7 36300626
    768898 8a63:O (3.1) BS01 rna ? GO:0003735 ... Q8Y447 36300626
    768899 8a63:P (3.1) BS01 rna ? GO:0003735 ... Q927L4 36300626
    768900 8a63:P (3.1) BS02 rna ? GO:0003735 ... Q927L4 36300626
    768901 8a63:Q (3.1) BS01 rna ? GO:0003735 ... Q8Y450 36300626
    768902 8a63:R (3.1) BS01 rna ? GO:0003735 ... Q8Y445 36300626
    768903 8a63:R (3.1) BS02 rna ? GO:0003735 ... Q8Y445 36300626
    768904 8a63:S (3.1) BS01 rna ? GO:0003735 ... O53083 36300626
    768905 8a63:T (3.1) BS01 rna ? GO:0000027 ... P66103 36300626
    768906 8a63:U (3.1) BS01 rna ? GO:0003723 ... Q8Y6Y9 36300626
    768907 8a63:V (3.1) BS01 rna ? GO:0003735 ... Q927L2 36300626
    768908 8a63:W (3.1) BS01 rna ? GO:0003735 ... Q8Y441 36300626
    768909 8a63:X (3.1) BS01 rna ? GO:0003723 ... Q8Y443 36300626
    768910 8a63:Z (3.1) BS01 rna ? GO:0003735 ... P66125 36300626
    768911 8a63:Z (3.1) BS02 rna ? GO:0003735 ... P66125 36300626
    768912 8a65:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37252362
    768913 8a65:A (1.6) BS02 L70 ? GO:0001836 ... P31947 37252362
    768914 8a66:A (1.901) BS01 5BS 2.7.11.1 GO:0004672 ... Q13188 N/A
    768915 8a66:B (1.901) BS01 5BS 2.7.11.1 GO:0004672 ... Q13188 N/A
    768916 8a67:D (1.86) BS01 ZN N/A N/A N/A 38977901
    768917 8a67:H (1.86) BS01 ZN N/A N/A N/A 38977901
    768918 8a68:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37252362
    768919 8a68:A (1.6) BS02 L7U ? GO:0001836 ... P31947 37252362
    768920 8a6c:A (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768921 8a6c:B (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768922 8a6d:A (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768923 8a6d:B (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768924 8a6e:A (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768925 8a6e:B (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    768926 8a6f:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37252362
    768927 8a6f:A (1.6) BS02 O56 ? GO:0001836 ... P31947 37252362
    768928 8a6h:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37252362
    768929 8a6h:A (1.6) BS02 L6L ? GO:0001836 ... P31947 37252362
    768930 8a6t:A (3.1) BS01 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768931 8a6t:A (3.1) BS02 HC1 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768932 8a6t:A (3.1) BS03 FES 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768933 8a6t:A (3.1) BS04 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768934 8a6t:A (3.1) BS05 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768935 8a6t:A (3.1) BS06 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768936 8a6t:B (3.1) BS01 FMN 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768937 8a6t:B (3.1) BS02 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768938 8a6t:B (3.1) BS03 ZN 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768939 8a6t:B (3.1) BS04 FES 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768940 8a6t:B (3.1) BS05 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768941 8a6t:B (3.1) BS06 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768942 8a6t:B (3.1) BS07 NAP 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768943 8a6t:C (3.1) BS01 FES 1.12.1.3 GO:0016491 ... A0A097ATI0 36811855
    768944 8a6t:D (3.1) BS01 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768945 8a6t:D (3.1) BS02 HC1 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768946 8a6t:D (3.1) BS03 FES 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768947 8a6t:D (3.1) BS04 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768948 8a6t:D (3.1) BS05 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768949 8a6t:D (3.1) BS06 SF4 1.12.1.3 GO:0005506 ... A0A097ATG3 36811855
    768950 8a6t:E (3.1) BS01 FMN 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768951 8a6t:E (3.1) BS02 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768952 8a6t:E (3.1) BS03 ZN 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768953 8a6t:E (3.1) BS04 FES 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768954 8a6t:E (3.1) BS05 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768955 8a6t:E (3.1) BS06 SF4 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768956 8a6t:E (3.1) BS07 NAP 1.12.1.3 GO:0008137 ... A0A097ATG4 36811855
    768957 8a6t:F (3.1) BS01 FES 1.12.1.3 GO:0016491 ... A0A097ATI0 36811855
    768958 8a6v:A (1.9) BS01 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768959 8a6v:A (1.9) BS02 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768960 8a6v:A (1.9) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768961 8a6v:A (1.9) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768962 8a6v:B (1.9) BS01 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768963 8a6v:B (1.9) BS02 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768964 8a6v:B (1.9) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768965 8a6w:B (2.09) BS01 K2B 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    768966 8a6w:B (2.09) BS02 HEM 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    768967 8a6w:E (2.09) BS01 K2B 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    768968 8a6w:E (2.09) BS02 HEM 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    768969 8a6x:A (2.45) BS01 ATP 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768970 8a6x:A (2.45) BS02 FMN 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768971 8a6x:B (2.45) BS01 ATP 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768972 8a6x:B (2.45) BS02 FMN 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768973 8a6z:A (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768974 8a6z:A (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768975 8a6z:A (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768976 8a6z:A (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768977 8a6z:B (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768978 8a6z:B (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768979 8a6z:B (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768980 8a6z:B (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768981 8a6z:C (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768982 8a6z:C (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768983 8a6z:C (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768984 8a6z:C (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768985 8a6z:D (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768986 8a6z:D (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768987 8a6z:D (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768988 8a6z:D (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768989 8a6z:E (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768990 8a6z:E (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768991 8a6z:E (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768992 8a6z:E (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768993 8a6z:F (2.4) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768994 8a6z:F (2.4) BS02 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768995 8a6z:F (2.4) BS03 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768996 8a6z:F (2.4) BS04 IPE 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768997 8a70:A (2.1) BS01 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768998 8a70:A (2.1) BS02 MG 2.5.1.1 GO:0004659 ... M1JS91 37308711
    768999 8a70:A (2.1) BS03 GPP 2.5.1.1 GO:0004659 ... M1JS91 37308711
    769000 8a73:A (1.6) BS01 MN 2.5.1.1 GO:0004659 ... M1JS91 37308711

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).