SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    77601 2cr8:A (-1.00) BS01 ZN ? N/A O15151 N/A
    77602 2crc:A (-1.00) BS01 ZN 2.3.2.31 N/A Q9BYM8 N/A
    77603 2crk:A (2.35) BS01 SO4 2.7.3.2 GO:0003824 ... P00563 9849893
    77604 2crk:A (2.35) BS02 SO4 2.7.3.2 GO:0003824 ... P00563 9849893
    77605 2crk:A (2.35) BS03 SO4 2.7.3.2 GO:0003824 ... P00563 9849893
    77606 2crr:A (-1.00) BS01 ZN ? GO:0005096 ... Q8IYB5 N/A
    77607 2crw:A (-1.00) BS01 ZN ? GO:0005096 ... Q9NP61 N/A
    77608 2crx:A (2.5) BS01 dna ? GO:0003677 ... P06956 9670032
    77609 2crx:B (2.5) BS01 dna ? GO:0003677 ... P06956 9670032
    77610 2crx:B (2.5) BS02 dna ? GO:0003677 ... P06956 9670032
    77611 2cs2:A (-1.00) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 N/A
    77612 2cs3:A (-1.00) BS01 ZN 2.3.2.27 N/A Q9H1B7 N/A
    77613 2cs3:A (-1.00) BS02 ZN 2.3.2.27 N/A Q9H1B7 N/A
    77614 2cs7:A (1.2) BS01 ZN ? N/A A0A0H2UQ89 16194532
    77615 2cs7:B (1.2) BS01 ZN ? N/A A0A0H2UQ89 16194532
    77616 2cs7:C (1.2) BS01 ZN ? N/A A0A0H2UQ89 16194532
    77617 2cs8:A (-1.00) BS01 ZN ? GO:0005634 ... O60284 N/A
    77618 2cs8:A (-1.00) BS02 ZN ? GO:0005634 ... O60284 N/A
    77619 2csc:A (1.7) BS01 CMC 2.3.3.1 GO:0005739 ... P23007 2043640
    77620 2csc:A (1.7) BS02 MLT 2.3.3.1 GO:0005739 ... P23007 2043640
    77621 2csg:A (2.9) BS01 FE ? N/A Q8ZQM7 N/A
    77622 2csh:A (-1.00) BS01 ZN ? N/A O43298 N/A
    77623 2csh:A (-1.00) BS02 ZN ? N/A O43298 N/A
    77624 2csh:A (-1.00) BS03 ZN ? N/A O43298 N/A
    77625 2csm:A (2.8) BS01 TYR 5.4.99.5 GO:0004106 ... P32178 8622937
    77626 2csn:A (2.5) BS01 CKI 2.7.11.1 GO:0004672 ... P40233 8692811 MOAD: Ki=39uM
    77627 2cst:A (1.9) BS01 PLP 2.6.1.1
    2.6.1.3
    GO:0003824 ... P00504 7897655
    77628 2cst:B (1.9) BS01 PLP 2.6.1.1
    2.6.1.3
    GO:0003824 ... P00504 7897655
    77629 2csv:A (-1.00) BS01 ZN ? GO:0008270 ... Q14134 N/A
    77630 2csv:A (-1.00) BS02 ZN ? GO:0008270 ... Q14134 N/A
    77631 2csx:A (2.7) BS01 rna 6.1.1.10 GO:0000166 ... O67298 16155581
    77632 2csx:B (2.7) BS01 rna 6.1.1.10 GO:0000166 ... O67298 16155581
    77633 2csy:A (-1.00) BS01 ZN ? N/A Q8IZP6 N/A
    77634 2csy:A (-1.00) BS02 ZN ? N/A Q8IZP6 N/A
    77635 2csz:A (-1.00) BS01 ZN ? N/A Q96C24 N/A
    77636 2csz:A (-1.00) BS02 ZN ? N/A Q96C24 N/A
    77637 2ct0:A (-1.00) BS01 ZN 2.3.2.27 GO:0006281 ... Q8WV22 N/A
    77638 2ct0:A (-1.00) BS02 ZN 2.3.2.27 GO:0006281 ... Q8WV22 N/A
    77639 2ct1:A (-1.00) BS01 ZN ? N/A P49711 N/A
    77640 2ct1:A (-1.00) BS02 ZN ? N/A P49711 N/A
    77641 2ct2:A (-1.00) BS01 ZN 2.3.2.27 N/A Q13049 N/A
    77642 2ct2:A (-1.00) BS02 ZN 2.3.2.27 N/A Q13049 N/A
    77643 2ct5:A (-1.00) BS01 ZN 2.3.2.- GO:0003677 ... O96006 N/A
    77644 2ct7:A (-1.00) BS01 ZN 2.3.2.31 GO:0004842 ... Q96EP0 N/A
    77645 2ct7:A (-1.00) BS02 ZN 2.3.2.31 GO:0004842 ... Q96EP0 N/A
    77646 2ct8:A (2.7) BS01 rna 6.1.1.10 GO:0000166 ... O67298 16155581
    77647 2ct8:A (2.7) BS02 MSP 6.1.1.10 GO:0000166 ... O67298 16155581
    77648 2ct8:B (2.7) BS01 rna 6.1.1.10 GO:0000166 ... O67298 16155581
    77649 2ct8:B (2.7) BS02 MSP 6.1.1.10 GO:0000166 ... O67298 16155581
    77650 2ct9:A (2.2) BS01 CA ? GO:0000139 ... P61023 15987692
    77651 2ct9:A (2.2) BS02 CA ? GO:0000139 ... P61023 15987692
    77652 2ct9:B (2.2) BS01 CA ? GO:0000139 ... P61023 15987692
    77653 2ct9:B (2.2) BS02 CA ? GO:0000139 ... P61023 15987692
    77654 2ctb:A (1.5) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 15299490
    77655 2ctc:A (1.4) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 15299490
    77656 2ctc:A (1.4) BS02 HFA 3.4.17.1 GO:0004181 ... P00730 15299490 MOAD: Ki=0.13mM
    77657 2ctd:A (-1.00) BS01 ZN ? GO:0008270 ... Q96ME7 N/A
    77658 2ctd:A (-1.00) BS02 ZN ? GO:0008270 ... Q96ME7 N/A
    77659 2cth:A (1.67) BS01 HEM ? GO:0009055 ... P00131 N/A
    77660 2cth:A (1.67) BS02 HEM ? GO:0009055 ... P00131 N/A
    77661 2cth:A (1.67) BS03 HEM ? GO:0009055 ... P00131 N/A
    77662 2cth:A (1.67) BS04 HEM ? GO:0009055 ... P00131 N/A
    77663 2cth:B (1.67) BS01 HEM ? GO:0009055 ... P00131 N/A
    77664 2cth:B (1.67) BS02 HEM ? GO:0009055 ... P00131 N/A
    77665 2cth:B (1.67) BS03 HEM ? GO:0009055 ... P00131 N/A
    77666 2cth:B (1.67) BS04 HEM ? GO:0009055 ... P00131 N/A
    77667 2ctn:A (-1.00) BS01 CA ? GO:0005509 ... P09860 9218458
    77668 2cts:A (2.0) BS01 COA 2.3.3.1 GO:0005739 ... P00889 7120407
    77669 2ctt:A (-1.00) BS01 ZN ? GO:0031072 ... Q96EY1 N/A
    77670 2ctt:A (-1.00) BS02 ZN ? GO:0031072 ... Q96EY1 N/A
    77671 2ctu:A (-1.00) BS01 ZN ? N/A Q8TF39 N/A
    77672 2ctv:A (1.95) BS01 MN ? GO:0030246 ... P02866 N/A
    77673 2ctv:A (1.95) BS02 CA ? GO:0030246 ... P02866 N/A
    77674 2ctz:A (2.6) BS01 PLP 2.5.1.- GO:0000096 ... Q5SK88 N/A
    77675 2ctz:B (2.6) BS01 PLP 2.5.1.- GO:0000096 ... Q5SK88 N/A
    77676 2cu0:A (2.1) BS01 XMP 1.1.1.205 GO:0000166 ... O58045 N/A
    77677 2cu0:B (2.1) BS01 XMP 1.1.1.205 GO:0000166 ... O58045 N/A
    77678 2cu8:A (-1.00) BS01 ZN ? N/A P52943 N/A
    77679 2cu8:A (-1.00) BS02 ZN ? N/A P52943 N/A
    77680 2cua:A (1.6) BS01 CUA 7.1.1.9 GO:0004129 ... P98052 10360350
    77681 2cua:B (1.6) BS01 ZN 7.1.1.9 GO:0004129 ... P98052 10360350
    77682 2cua:B (1.6) BS02 CUA 7.1.1.9 GO:0004129 ... P98052 10360350
    77683 2cul:A (1.65) BS01 FAD ? GO:0002098 ... Q5SH33 16245325
    77684 2cup:A (-1.00) BS01 ZN ? GO:0007517 ... Q13642 N/A
    77685 2cup:A (-1.00) BS02 ZN ? GO:0007517 ... Q13642 N/A
    77686 2cup:A (-1.00) BS03 ZN ? GO:0007517 ... Q13642 N/A
    77687 2cuq:A (-1.00) BS01 ZN ? N/A Q13643 N/A
    77688 2cuq:A (-1.00) BS02 ZN ? N/A Q13643 N/A
    77689 2cur:A (-1.00) BS01 ZN ? GO:0007517 ... Q13642 N/A
    77690 2cur:A (-1.00) BS02 ZN ? GO:0007517 ... Q13642 N/A
    77691 2cuu:A (1.75) BS01 AZI 3.2.1.17 GO:0003796 ... P00720 19384990
    77692 2cuz:A (1.98) BS01 GLU 6.1.1.17 GO:0000049 ... P27000 17161369
    77693 2cv0:A (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 17161369
    77694 2cv0:A (2.4) BS02 GLU 6.1.1.17 GO:0000049 ... P27000 17161369
    77695 2cv0:B (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 17161369
    77696 2cv0:B (2.4) BS02 GLU 6.1.1.17 GO:0000049 ... P27000 17161369
    77697 2cv1:A (2.41) BS01 rna 6.1.1.17 GO:0000049 ... P27000 N/A
    77698 2cv1:A (2.41) BS02 ATP 6.1.1.17 GO:0000049 ... P27000 N/A
    77699 2cv1:A (2.41) BS03 GAU 6.1.1.17 GO:0000049 ... P27000 N/A
    77700 2cv1:B (2.41) BS01 rna 6.1.1.17 GO:0000049 ... P27000 N/A
    77701 2cv1:B (2.41) BS02 GAU 6.1.1.17 GO:0000049 ... P27000 N/A
    77702 2cv1:B (2.41) BS03 ATP 6.1.1.17 GO:0000049 ... P27000 N/A
    77703 2cv2:A (2.69) BS01 rna 6.1.1.17 GO:0000049 ... P27000 17161369
    77704 2cv2:A (2.69) BS02 GSU 6.1.1.17 GO:0000049 ... P27000 17161369
    77705 2cv2:B (2.69) BS01 rna 6.1.1.17 GO:0000049 ... P27000 17161369
    77706 2cv2:B (2.69) BS02 GSU 6.1.1.17 GO:0000049 ... P27000 17161369
    77707 2cv3:A (1.9) BS01 peptide 3.4.21.36 GO:0004252 ... P00772 16511165
    77708 2cv5:A (2.5) BS01 dna ? GO:0000786 ... P68431 15951514
    77709 2cv5:A (2.5) BS02 dna ? GO:0000786 ... P68431 15951514
    77710 2cv5:B (2.5) BS01 dna ? GO:0000781 ... P62805 15951514
    77711 2cv5:B (2.5) BS02 dna ? GO:0000781 ... P62805 15951514
    77712 2cv5:C (2.5) BS01 dna ? GO:0000786 ... P04908 15951514
    77713 2cv5:C (2.5) BS02 dna ? GO:0000786 ... P04908 15951514
    77714 2cv5:D (2.5) BS01 dna ? GO:0000786 ... O60814 15951514
    77715 2cv5:D (2.5) BS02 dna ? GO:0000786 ... O60814 15951514
    77716 2cv5:E (2.5) BS01 dna ? GO:0000786 ... P68431 15951514
    77717 2cv5:E (2.5) BS02 dna ? GO:0000786 ... P68431 15951514
    77718 2cv5:F (2.5) BS01 dna ? GO:0000781 ... P62805 15951514
    77719 2cv5:F (2.5) BS02 dna ? GO:0000781 ... P62805 15951514
    77720 2cv5:G (2.5) BS01 dna ? GO:0000786 ... P04908 15951514
    77721 2cv5:G (2.5) BS02 dna ? GO:0000786 ... P04908 15951514
    77722 2cv5:H (2.5) BS01 dna ? GO:0000786 ... O60814 15951514
    77723 2cv5:H (2.5) BS02 dna ? GO:0000786 ... O60814 15951514
    77724 2cvc:A (2.0) BS01 HEC ? GO:0009055 ... P24092 N/A
    77725 2cvc:A (2.0) BS02 HEC ? GO:0009055 ... P24092 N/A
    77726 2cvc:A (2.0) BS03 HEC ? GO:0009055 ... P24092 N/A
    77727 2cvc:A (2.0) BS04 HEC ? GO:0009055 ... P24092 N/A
    77728 2cvc:A (2.0) BS05 HEC ? GO:0009055 ... P24092 N/A
    77729 2cvc:A (2.0) BS06 HEC ? GO:0009055 ... P24092 N/A
    77730 2cvc:A (2.0) BS07 HEC ? GO:0009055 ... P24092 N/A
    77731 2cvc:A (2.0) BS08 HEC ? GO:0009055 ... P24092 N/A
    77732 2cvc:A (2.0) BS09 HEC ? GO:0009055 ... P24092 N/A
    77733 2cvc:A (2.0) BS10 HEC ? GO:0009055 ... P24092 N/A
    77734 2cvc:A (2.0) BS11 HEC ? GO:0009055 ... P24092 N/A
    77735 2cvc:A (2.0) BS12 HEC ? GO:0009055 ... P24092 N/A
    77736 2cvc:A (2.0) BS13 HEC ? GO:0009055 ... P24092 N/A
    77737 2cvc:A (2.0) BS14 HEC ? GO:0009055 ... P24092 N/A
    77738 2cvc:A (2.0) BS15 HEC ? GO:0009055 ... P24092 N/A
    77739 2cvc:A (2.0) BS16 HEC ? GO:0009055 ... P24092 N/A
    77740 2cvd:A (1.45) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010
    77741 2cvd:A (1.45) BS02 HQL 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010 MOAD: Kd=0.8uM
    BindingDB: IC50=3800nM
    77742 2cvd:B (1.45) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010
    77743 2cvd:B (1.45) BS02 HQL 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010 MOAD: Kd=0.8uM
    BindingDB: IC50=3800nM
    77744 2cvd:C (1.45) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010
    77745 2cvd:C (1.45) BS02 HQL 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010 MOAD: Kd=0.8uM
    BindingDB: IC50=3800nM
    77746 2cvd:D (1.45) BS01 GSH 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010
    77747 2cvd:D (1.45) BS02 HQL 2.5.1.18
    5.3.99.2
    GO:0000287 ... O60760 16547010 MOAD: Kd=0.8uM
    BindingDB: IC50=3800nM
    77748 2cvj:A (2.0) BS01 FAD ? GO:0016491 ... Q5SLC3 N/A
    77749 2cvq:A (2.08) BS01 NDP 1.1.1.37 GO:0003824 ... P10584 16009341 MOAD: Ki=2.6mM
    77750 2cvq:B (2.08) BS01 NDP 1.1.1.37 GO:0003824 ... P10584 16009341 MOAD: Ki=2.6mM
    77751 2cvt:A (3.2) BS01 ANP 1.17.4.1 GO:0000166 ... P21524 16537479
    77752 2cvu:A (2.9) BS01 ANP 1.17.4.1 GO:0000166 ... P21524 16537479
    77753 2cvu:A (2.9) BS02 CDP 1.17.4.1 GO:0000166 ... P21524 16537479
    77754 2cvv:A (2.9) BS01 ANP 1.17.4.1 GO:0000166 ... P21524 16537479
    77755 2cvv:A (2.9) BS02 UDP 1.17.4.1 GO:0000166 ... P21524 16537479
    77756 2cvw:A (2.4) BS01 TTP 1.17.4.1 GO:0000166 ... P21524 16537479
    77757 2cvw:A (2.4) BS02 GDP 1.17.4.1 GO:0000166 ... P21524 16537479
    77758 2cvx:A (2.2) BS01 DGT 1.17.4.1 GO:0000166 ... P21524 16537479
    77759 2cvx:A (2.2) BS02 ADP 1.17.4.1 GO:0000166 ... P21524 16537479
    77760 2cvy:A (2.4) BS01 peptide 1.17.4.1 GO:0000166 ... P21524 16537479
    77761 2cvy:A (2.4) BS02 TTP 1.17.4.1 GO:0000166 ... P21524 16537479
    77762 2cvz:A (1.8) BS01 NDP 1.1.1.31 GO:0016054 ... Q5SLQ6 16126223
    77763 2cvz:B (1.8) BS01 NDP 1.1.1.31 GO:0016054 ... Q5SLQ6 16126223
    77764 2cvz:C (1.8) BS01 NDP 1.1.1.31 GO:0016054 ... Q5SLQ6 16126223
    77765 2cw0:D (3.3) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16122422
    77766 2cw0:D (3.3) BS02 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16122422
    77767 2cw0:N (3.3) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 16122422
    77768 2cw0:N (3.3) BS02 MG 2.7.7.6 GO:0000287 ... Q8RQE8 16122422
    77769 2cw2:A (1.86) BS01 FE 1.15.1.1 GO:0004784 ... Q8ISJ0 17077482
    77770 2cw2:B (1.86) BS01 FE 1.15.1.1 GO:0004784 ... Q8ISJ0 17077482
    77771 2cw3:A (2.5) BS01 FE 1.15.1.1 GO:0004784 ... Q8ISI9 17077482
    77772 2cw3:B (2.5) BS01 FE 1.15.1.1 GO:0004784 ... Q8ISI9 17077482
    77773 2cw6:A (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77774 2cw6:A (2.1) BS02 3HG 4.1.3.4 GO:0000287 ... P35914 16330550
    77775 2cw6:B (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77776 2cw6:C (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77777 2cw6:D (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77778 2cw6:E (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77779 2cw6:F (2.1) BS01 MG 4.1.3.4 GO:0000287 ... P35914 16330550
    77780 2cw9:A (1.9) BS01 1PE ? N/A O43615 18084070
    77781 2cwf:A (1.8) BS01 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77782 2cwf:A (1.8) BS02 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77783 2cwf:B (1.8) BS01 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77784 2cwf:B (1.8) BS02 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77785 2cwg:A (2.0) BS01 SIA ? GO:0008061 ... P10968 8345526
    77786 2cwg:B (2.0) BS01 peptide ? GO:0008061 ... P10968 8345526
    77787 2cwg:B (2.0) BS02 peptide ? GO:0008061 ... P10968 8345526
    77788 2cwg:B (2.0) BS03 SIA ? GO:0008061 ... P10968 8345526
    77789 2cwg:B (2.0) BS04 SIA ? GO:0008061 ... P10968 8345526
    77790 2cwh:A (1.7) BS01 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77791 2cwh:A (1.7) BS02 PYC 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77792 2cwh:A (1.7) BS03 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77793 2cwh:B (1.7) BS01 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77794 2cwh:B (1.7) BS02 NDP 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77795 2cwh:B (1.7) BS03 PYC 1.4.1.17
    1.5.1.21
    GO:0006560 ... Q4U331 16192274
    77796 2cwm:A (1.95) BS01 CA ? GO:0005515 ... P81460 16337811
    77797 2cwm:A (1.95) BS02 MN ? GO:0005515 ... P81460 16337811
    77798 2cwm:D (1.95) BS01 CA ? GO:0005515 ... P81364 16337811
    77799 2cwm:D (1.95) BS02 MN ? GO:0005515 ... P81364 16337811
    77800 2cws:A (1.0) BS01 SO4 4.2.2.3 N/A Q75WP3 16081095

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).