SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7601 1cr7:E (2.6) BS03 CA ? GO:0030246 ... P02872 11288176
    7602 1cr7:E (2.6) BS04 MN ? GO:0030246 ... P02872 11288176
    7603 1cr7:F (2.6) BS01 CA ? GO:0030246 ... P02872 11288176
    7604 1cr7:F (2.6) BS02 MN ? GO:0030246 ... P02872 11288176
    7605 1cr7:G (2.6) BS01 CA ? GO:0030246 ... P02872 11288176
    7606 1cr7:G (2.6) BS02 MN ? GO:0030246 ... P02872 11288176
    7607 1cr7:H (2.6) BS01 CA ? GO:0030246 ... P02872 11288176
    7608 1cr7:H (2.6) BS02 MN ? GO:0030246 ... P02872 11288176
    7609 1cr8:A (-1.00) BS01 CA ? N/A Q07954 10318830
    7610 1cra:A (1.9) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8331673
    7611 1cra:A (1.9) BS02 TRI 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8331673
    7612 1crb:A (2.1) BS01 RTL ? GO:0002138 ... P02696 7683727
    7613 1crc:A (2.08) BS01 HEC ? GO:0005515 ... P00004 8591047
    7614 1crc:B (2.08) BS01 HEC ? GO:0005515 ... P00004 8591047
    7615 1crg:A (2.0) BS01 HEC ? GO:0005515 ... P00044 8114094
    7616 1crh:A (1.9) BS01 HEC ? GO:0005515 ... P00044 8114094
    7617 1cri:A (2.0) BS01 HEM ? GO:0005515 ... P00044 8114094
    7618 1crj:A (2.05) BS01 HEC ? GO:0005515 ... P00044 8114094
    7619 1crp:A (-1.00) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 8142349
    7620 1crq:A (-1.00) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 8142349
    7621 1crr:A (-1.00) BS01 MG 3.6.5.2 GO:0003924 ... P01112 8142349
    7622 1crr:A (-1.00) BS02 GDP 3.6.5.2 GO:0003924 ... P01112 8142349
    7623 1cru:A (1.5) BS01 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7624 1cru:A (1.5) BS02 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7625 1cru:A (1.5) BS03 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7626 1cru:A (1.5) BS04 PQQ 1.1.5.2 GO:0008876 ... P13650 10518528
    7627 1cru:A (1.5) BS05 HDN 1.1.5.2 GO:0008876 ... P13650 10518528
    7628 1cru:B (1.5) BS01 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7629 1cru:B (1.5) BS02 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7630 1cru:B (1.5) BS03 CA 1.1.5.2 GO:0008876 ... P13650 10518528
    7631 1cru:B (1.5) BS04 PQQ 1.1.5.2 GO:0008876 ... P13650 10518528
    7632 1crx:A (2.4) BS01 dna ? GO:0003677 ... P06956 9288963
    7633 1crx:A (2.4) BS02 dna ? GO:0003677 ... P06956 9288963
    7634 1crx:B (2.4) BS01 dna ? GO:0003677 ... P06956 9288963
    7635 1crx:B (2.4) BS02 dna ? GO:0003677 ... P06956 9288963
    7636 1crx:B (2.4) BS03 dna ? GO:0003677 ... P06956 9288963
    7637 1cry:A (3.0) BS01 HEC ? GO:0009055 ... P00083 15299438
    7638 1cs0:A (2.0) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7639 1cs0:A (2.0) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7640 1cs0:A (2.0) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7641 1cs0:A (2.0) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7642 1cs0:A (2.0) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7643 1cs0:A (2.0) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7644 1cs0:A (2.0) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7645 1cs0:C (2.0) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7646 1cs0:C (2.0) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7647 1cs0:C (2.0) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7648 1cs0:C (2.0) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7649 1cs0:C (2.0) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7650 1cs0:C (2.0) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7651 1cs0:C (2.0) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7652 1cs0:E (2.0) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7653 1cs0:E (2.0) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7654 1cs0:E (2.0) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7655 1cs0:E (2.0) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7656 1cs0:E (2.0) BS05 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7657 1cs0:E (2.0) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7658 1cs0:E (2.0) BS07 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7659 1cs0:E (2.0) BS08 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7660 1cs0:G (2.0) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7661 1cs0:G (2.0) BS02 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7662 1cs0:G (2.0) BS03 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7663 1cs0:G (2.0) BS04 PO4 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7664 1cs0:G (2.0) BS05 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7665 1cs0:G (2.0) BS06 ADP 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7666 1cs0:G (2.0) BS07 ORN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10587438
    7667 1cs1:D (1.5) BS01 DHD 2.5.1.48 GO:0000096 ... P00935 9843488
    7668 1cs4:A (2.5) BS01 MG 4.6.1.1 GO:0009190 ... P30803 11087399
    7669 1cs4:A (2.5) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 11087399
    7670 1cs4:A (2.5) BS03 POP 4.6.1.1 GO:0009190 ... P30803 11087399
    7671 1cs4:A (2.5) BS04 101 4.6.1.1 GO:0009190 ... P30803 11087399
    7672 1cs4:B (2.5) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 11087399
    7673 1cs4:B (2.5) BS02 POP 4.6.1.1 GO:0009190 ... P26769 11087399
    7674 1cs4:B (2.5) BS03 101 4.6.1.1 GO:0009190 ... P26769 11087399 MOAD: ic50=2.7uM
    7675 1cs4:C (2.5) BS01 MG ? GO:0003924 ... P04896 11087399
    7676 1cs4:C (2.5) BS02 GSP ? GO:0003924 ... P04896 11087399
    7677 1csb:A (2.0) BS01 EP0 3.4.22.1 GO:0006508 ... P07858 7718586
    7678 1csb:B (2.0) BS01 EP0 3.4.22.1 GO:0006508 ... P07858 7718586
    7679 1csb:D (2.0) BS01 EP0 3.4.22.1 GO:0006508 ... P07858 7718586
    7680 1csb:E (2.0) BS01 EP0 3.4.22.1 GO:0006508 ... P07858 7718586
    7681 1csc:A (1.7) BS01 CMC 2.3.3.1 GO:0005739 ... P23007 2043640
    7682 1csc:A (1.7) BS02 LMR 2.3.3.1 GO:0005739 ... P23007 2043640
    7683 1cse:E (1.2) BS01 CA 3.4.21.62 GO:0004252 ... P00780 3301348
    7684 1cse:E (1.2) BS02 CA 3.4.21.62 GO:0004252 ... P00780 3301348
    7685 1csh:A (1.65) BS01 OAA 2.3.3.1 GO:0005739 ... P23007 8011640
    7686 1csh:A (1.65) BS02 AMX 2.3.3.1 GO:0005739 ... P23007 8011640 MOAD: Ki=28nM
    7687 1csi:A (1.7) BS01 OAA 2.3.3.1 GO:0005739 ... P23007 8011640
    7688 1csi:A (1.7) BS02 CMX 2.3.3.1 GO:0005739 ... P23007 8011640 MOAD: Ki=1.6nM
    7689 1csm:A (2.2) BS01 TRP 5.4.99.5 GO:0004106 ... P32178 7971967
    7690 1csm:A (2.2) BS02 TRP 5.4.99.5 GO:0004106 ... P32178 7971967
    7691 1csm:B (2.2) BS01 TRP 5.4.99.5 GO:0004106 ... P32178 7971967
    7692 1csm:B (2.2) BS02 TRP 5.4.99.5 GO:0004106 ... P32178 7971967
    7693 1csn:A (2.0) BS01 MG 2.7.11.1 GO:0004672 ... P40233 7889932
    7694 1csn:A (2.0) BS02 ATP 2.7.11.1 GO:0004672 ... P40233 7889932
    7695 1csr:A (1.7) BS01 OAA 2.3.3.1 GO:0005739 ... P23007 7492547
    7696 1csr:A (1.7) BS02 FAM 2.3.3.1 GO:0005739 ... P23007 7492547 MOAD: Ki=42nM
    7697 1css:A (1.7) BS01 OAA 2.3.3.1 GO:0005739 ... P23007 7492547
    7698 1css:A (1.7) BS02 FCX 2.3.3.1 GO:0005739 ... P23007 7492547 MOAD: Ki=0.8uM
    7699 1csu:A (1.81) BS01 HEC ? GO:0005515 ... P00044 7757009
    7700 1csv:A (1.9) BS01 HEC ? GO:0005515 ... P00044 7757009
    7701 1csw:A (1.9) BS01 HEC ? GO:0005515 ... P00044 7757009
    7702 1csx:A (1.9) BS01 HEC ? GO:0005515 ... P00044 7757009
    7703 1csy:A (-1.00) BS01 peptide 2.7.10.2 N/A P43405 8590001
    7704 1csz:A (-1.00) BS01 peptide 2.7.10.2 N/A P43405 8590001
    7705 1ct1:F (2.3) BS01 GAL ? GO:0005515 ... P01556 9232653
    7706 1ct1:G (2.3) BS01 SIA ? GO:0005515 ... P01556 9232653
    7707 1ct1:G (2.3) BS02 GAL ? GO:0005515 ... P01556 9232653
    7708 1ct1:H (2.3) BS01 SIA ? GO:0005515 ... P01556 9232653
    7709 1ct5:A (2.0) BS01 PLP ? GO:0005575 ... P38197 12499548
    7710 1ct8:A (2.2) BS01 TAA ? GO:0002250 ... P01837 10574796
    7711 1ct8:B (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    7712 1ct8:B (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    7713 1ct8:C (2.2) BS01 TAA ? GO:0002250 ... P01837 10574796
    7714 1ct8:D (2.2) BS01 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    7715 1ct8:D (2.2) BS02 TAA ? N/A P01868 10574796 MOAD: Kd=0.3uM
    7716 1ct9:A (2.0) BS01 AMP 6.3.5.4 GO:0004066 ... P22106 10587437
    7717 1ct9:A (2.0) BS02 GLN 6.3.5.4 GO:0004066 ... P22106 10587437
    7718 1ct9:B (2.0) BS01 AMP 6.3.5.4 GO:0004066 ... P22106 10587437
    7719 1ct9:B (2.0) BS02 GLN 6.3.5.4 GO:0004066 ... P22106 10587437
    7720 1ct9:C (2.0) BS01 AMP 6.3.5.4 GO:0004066 ... P22106 10587437
    7721 1ct9:C (2.0) BS02 GLN 6.3.5.4 GO:0004066 ... P22106 10587437
    7722 1ct9:D (2.0) BS01 AMP 6.3.5.4 GO:0004066 ... P22106 10587437
    7723 1ct9:D (2.0) BS02 GLN 6.3.5.4 GO:0004066 ... P22106 10587437
    7724 1cta:A (-1.00) BS01 CA ? N/A P02588 1390738
    7725 1cta:B (-1.00) BS01 CA ? N/A P02588 1390738
    7726 1ctd:A (-1.00) BS01 CA ? N/A P02588 1390738
    7727 1ctd:B (-1.00) BS01 CA ? N/A P02588 1390738
    7728 1cte:A (2.1) BS01 PYS 3.4.22.1 GO:0006508 ... P00787 7890671
    7729 1cte:B (2.1) BS01 PYS 3.4.22.1 GO:0006508 ... P00787 7890671
    7730 1ctj:A (1.1) BS01 HEM ? GO:0005506 ... Q09099 8591027
    7731 1ctl:A (-1.00) BS01 ZN ? N/A P67966 7664053
    7732 1ctl:A (-1.00) BS02 ZN ? N/A P67966 7664053
    7733 1ctm:A (2.3) BS01 HEC ? GO:0005506 ... P36438 8081747
    7734 1ctp:E (2.9) BS01 peptide 2.7.11.11 GO:0001669 ... P36887 15299513
    7735 1ctq:A (1.26) BS01 MG 3.6.5.2 GO:0003924 ... P01112 10574788
    7736 1ctq:A (1.26) BS02 GNP 3.6.5.2 GO:0003924 ... P01112 10574788
    7737 1ctr:A (2.45) BS01 CA ? GO:0000922 ... P0DP23 7803388
    7738 1ctr:A (2.45) BS02 CA ? GO:0000922 ... P0DP23 7803388
    7739 1ctr:A (2.45) BS03 CA ? GO:0000922 ... P0DP23 7803388
    7740 1ctr:A (2.45) BS04 CA ? GO:0000922 ... P0DP23 7803388
    7741 1ctr:A (2.45) BS05 TFP ? GO:0000922 ... P0DP23 7803388 BindingDB: Kd=1000nM
    7742 1ctt:A (2.2) BS01 ZN 3.5.4.5 GO:0001884 ... P0ABF6 7718553
    7743 1ctt:A (2.2) BS02 DHZ 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=30uM
    7744 1ctu:A (2.3) BS01 ZN 3.5.4.5 GO:0001884 ... P0ABF6 7718553
    7745 1ctu:A (2.3) BS02 ZEB 3.5.4.5 GO:0001884 ... P0ABF6 7718553 MOAD: Ki=1.2pM
    7746 1cty:A (2.2) BS01 HEC ? GO:0005515 ... P00044 8308895
    7747 1ctz:A (1.9) BS01 HEC ? GO:0005515 ... P00044 8308895
    7748 1cu1:A (2.5) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 10574797
    7749 1cu1:A (2.5) BS02 PO4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 10574797
    7750 1cu1:B (2.5) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 10574797
    7751 1cu4:H (2.9) BS01 peptide N/A N/A N/A 10543972
    7752 1cu4:L (2.9) BS01 peptide N/A N/A N/A 10543972
    7753 1cul:A (2.4) BS01 MG 4.6.1.1 GO:0009190 ... P30803 11087399
    7754 1cul:A (2.4) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 11087399
    7755 1cul:A (2.4) BS03 3PO 4.6.1.1 GO:0009190 ... P30803 11087399
    7756 1cul:A (2.4) BS04 103 4.6.1.1 GO:0009190 ... P30803 11087399
    7757 1cul:B (2.4) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 11087399
    7758 1cul:B (2.4) BS02 3PO 4.6.1.1 GO:0009190 ... P26769 11087399
    7759 1cul:B (2.4) BS03 103 4.6.1.1 GO:0009190 ... P26769 11087399
    7760 1cul:C (2.4) BS01 MG ? GO:0003924 ... P04896 11087399
    7761 1cul:C (2.4) BS02 GSP ? GO:0003924 ... P04896 11087399
    7762 1cuo:A (1.6) BS01 CU ? GO:0005507 ... P12335 14516747
    7763 1cur:A (-1.00) BS01 CU ? GO:0005507 ... P0C918 8947573
    7764 1cv8:A (1.75) BS01 E64 3.4.22.48 GO:0006508 ... P81297 N/A
    7765 1cva:A (2.25) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8262987
    7766 1cva:A (2.25) BS02 AZI 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8262987 BindingDB: Ki=1500000nM
    7767 1cvb:A (2.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8262987
    7768 1cvb:A (2.4) BS02 SO4 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8262987
    7769 1cvc:A (2.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    7770 1cvd:A (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7803386
    7771 1cve:A (2.25) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7803386
    7772 1cvh:A (2.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 7803386
    7773 1cvi:A (3.2) BS01 GLY 3.1.3.2
    3.1.3.48
    3.1.3.5
    GO:0003993 ... P15309 10639192
    7774 1cvi:B (3.2) BS01 GLY 3.1.3.2
    3.1.3.48
    3.1.3.5
    GO:0003993 ... P15309 10639192
    7775 1cvi:C (3.2) BS01 GLY 3.1.3.2
    3.1.3.48
    3.1.3.5
    GO:0003993 ... P15309 10639192
    7776 1cvi:D (3.2) BS01 GLY 3.1.3.2
    3.1.3.48
    3.1.3.5
    GO:0003993 ... P15309 10639192
    7777 1cvj:A (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7778 1cvj:B (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7779 1cvj:C (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7780 1cvj:D (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7781 1cvj:E (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7782 1cvj:F (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7783 1cvj:G (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7784 1cvj:H (2.6) BS01 rna ? GO:0003676 ... P11940 10499800
    7785 1cvj:H (2.6) BS02 A ? GO:0003676 ... P11940 10499800
    7786 1cvl:A (1.6) BS01 CA 3.1.1.3 GO:0003824 ... P0DUB9 8683577
    7787 1cvm:A (2.4) BS01 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    7788 1cvm:A (2.4) BS02 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    7789 1cvm:A (2.4) BS03 CA 3.1.3.8 GO:0005576 ... O66037 10655618
    7790 1cvn:A (2.3) BS01 MAN ? GO:0030246 ... P02866 8557713
    7791 1cvn:A (2.3) BS02 MAN ? GO:0030246 ... P02866 8557713
    7792 1cvn:A (2.3) BS03 MN ? GO:0030246 ... P02866 8557713
    7793 1cvn:A (2.3) BS04 CA ? GO:0030246 ... P02866 8557713
    7794 1cvn:B (2.3) BS01 MAN ? GO:0030246 ... P02866 8557713
    7795 1cvn:B (2.3) BS02 MAN ? GO:0030246 ... P02866 8557713
    7796 1cvn:B (2.3) BS03 MAN ? GO:0030246 ... P02866 8557713
    7797 1cvn:B (2.3) BS04 MN ? GO:0030246 ... P02866 8557713
    7798 1cvn:B (2.3) BS05 CA ? GO:0030246 ... P02866 8557713
    7799 1cvn:C (2.3) BS01 MAN ? GO:0030246 ... P02866 8557713
    7800 1cvn:C (2.3) BS02 MAN ? GO:0030246 ... P02866 8557713

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).