SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    77801 2cws:A (1.0) BS02 SO4 4.2.2.3 N/A Q75WP3 16081095
    77802 2cwt:A (1.82) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77803 2cwt:B (1.82) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77804 2cwu:A (1.85) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77805 2cwu:B (1.85) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77806 2cwv:A (1.85) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77807 2cwv:B (1.85) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16566584
    77808 2cww:A (2.6) BS01 SAH 2.1.1.191 GO:0003723 ... Q5SIT4 16511182
    77809 2cww:B (2.6) BS01 SAH 2.1.1.191 GO:0003723 ... Q5SIT4 16511182
    77810 2cx8:A (2.53) BS01 SAH 2.1.1.193 GO:0005737 ... Q5SKI6 N/A
    77811 2cx8:B (2.53) BS01 SAH 2.1.1.193 GO:0005737 ... Q5SKI6 N/A
    77812 2cxb:A (1.95) BS01 HEC ? GO:0009055 ... P0C0X8 15299423
    77813 2cxb:B (1.95) BS01 HEC ? GO:0009055 ... P0C0X8 15299423
    77814 2cxg:A (2.5) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77815 2cxg:A (2.5) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77816 2cxg:A (2.5) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77817 2cxg:A (2.5) BS04 G6D 2.4.1.19 GO:0003824 ... P43379 7857935
    77818 2cxg:A (2.5) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77819 2cxg:A (2.5) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77820 2cxg:A (2.5) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77821 2cxg:A (2.5) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77822 2cxg:A (2.5) BS09 ACI 2.4.1.19 GO:0003824 ... P43379 7857935
    77823 2cxg:A (2.5) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 7857935
    77824 2cxg:A (2.5) BS11 CA 2.4.1.19 GO:0003824 ... P43379 7857935
    77825 2cxg:A (2.5) BS12 CA 2.4.1.19 GO:0003824 ... P43379 7857935
    77826 2cxn:A (1.4) BS01 PO4 5.3.1.9 GO:0002639 ... P06745 16375918
    77827 2cxo:A (1.8) BS01 DER 5.3.1.9 GO:0002639 ... P06745 16375918
    77828 2cxo:B (1.8) BS01 DER 5.3.1.9 GO:0002639 ... P06745 16375918
    77829 2cxp:A (1.7) BS01 A5P 5.3.1.9 GO:0002639 ... P06745 16375918
    77830 2cxp:B (1.7) BS01 A5P 5.3.1.9 GO:0002639 ... P06745 16375918
    77831 2cxq:A (1.5) BS01 S6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77832 2cxq:B (1.5) BS01 S6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77833 2cxr:A (1.7) BS01 6PG 5.3.1.9 GO:0002639 ... P06745 16375918
    77834 2cxr:B (1.7) BS01 6PG 5.3.1.9 GO:0002639 ... P06745 16375918
    77835 2cxs:A (1.5) BS01 F6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77836 2cxs:B (1.5) BS01 F6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77837 2cxt:A (1.5) BS01 F6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77838 2cxt:B (1.5) BS01 F6P 5.3.1.9 GO:0002639 ... P06745 16375918
    77839 2cxu:A (1.65) BS01 PO4 5.3.1.9 GO:0002639 ... P06745 16375918
    77840 2cxv:A (1.4) BS01 BBL 2.7.7.48
    3.4.22.28
    3.6.1.15
    GO:0004197 ... P13901 16288920
    77841 2cxx:A (1.7) BS01 GDP ? GO:0005525 ... O57939 N/A
    77842 2cxx:B (1.7) BS01 GDP ? GO:0005525 ... O57939 N/A
    77843 2cxx:C (1.7) BS01 GDP ? GO:0005525 ... O57939 N/A
    77844 2cy0:A (1.9) BS01 NAP 1.1.1.25 GO:0004764 ... Q5SJF8 17825835
    77845 2cy2:A (2.0) BS01 ACO ? GO:0016747 ... Q5SJ05 N/A
    77846 2cy3:A (1.7) BS01 HEC ? GO:0009055 ... P00136 7966289
    77847 2cy3:A (1.7) BS02 HEC ? GO:0009055 ... P00136 7966289
    77848 2cy3:A (1.7) BS03 HEC ? GO:0009055 ... P00136 7966289
    77849 2cy3:A (1.7) BS04 HEC ? GO:0009055 ... P00136 7966289
    77850 2cy4:A (1.94) BS01 CA ? N/A Q8R5F8 N/A
    77851 2cy5:A (1.9) BS01 CA ? N/A Q8R5F8 N/A
    77852 2cy6:A (2.0) BS01 GLC ? GO:0005515 ... P81460 16677825
    77853 2cy6:A (2.0) BS02 GLC ? GO:0005515 ... P81460 16677825
    77854 2cy6:A (2.0) BS03 MN ? GO:0005515 ... P81460 16677825
    77855 2cy6:A (2.0) BS04 CA ? GO:0005515 ... P81460 16677825
    77856 2cy6:D (2.0) BS01 GLC ? GO:0005515 ... P81460 16677825
    77857 2cy6:D (2.0) BS02 GLC ? GO:0005515 ... P81460 16677825
    77858 2cy6:D (2.0) BS03 MN ? GO:0005515 ... P81460 16677825
    77859 2cy6:D (2.0) BS04 CA ? GO:0005515 ... P81460 16677825
    77860 2cyb:A (1.8) BS01 TYR 6.1.1.1 GO:0000166 ... O29482 16325203
    77861 2cyb:B (1.8) BS01 TYR 6.1.1.1 GO:0000166 ... O29482 16325203
    77862 2cyc:A (2.2) BS01 TYR 6.1.1.1 GO:0000166 ... O58739 16325203
    77863 2cyc:B (2.2) BS01 TYR 6.1.1.1 GO:0000166 ... O58739 16325203
    77864 2cye:A (1.9) BS01 ZN 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77865 2cye:A (1.9) BS02 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77866 2cye:A (1.9) BS03 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77867 2cye:B (1.9) BS01 ZN 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77868 2cye:B (1.9) BS02 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77869 2cye:B (1.9) BS03 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77870 2cye:C (1.9) BS01 ZN 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77871 2cye:C (1.9) BS02 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77872 2cye:C (1.9) BS03 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77873 2cye:D (1.9) BS01 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77874 2cye:D (1.9) BS02 COA 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77875 2cye:D (1.9) BS03 ZN 3.1.2.- GO:0047617 ... Q5SH84 19622860
    77876 2cyf:A (1.8) BS01 GLC ? GO:0005515 ... P81460 16677825
    77877 2cyf:A (1.8) BS02 GLC ? GO:0005515 ... P81460 16677825
    77878 2cyf:A (1.8) BS03 CA ? GO:0005515 ... P81460 16677825
    77879 2cyf:A (1.8) BS04 MN ? GO:0005515 ... P81460 16677825
    77880 2cyf:C (1.8) BS01 GLC ? GO:0005515 ... P55915 16677825
    77881 2cyf:C (1.8) BS02 CA ? GO:0005515 ... P55915 16677825
    77882 2cyf:C (1.8) BS03 MN ? GO:0005515 ... P55915 16677825
    77883 2cyh:A (1.64) BS01 ALA 5.2.1.8 GO:0000413 ... P62937 8652512
    77884 2cyh:A (1.64) BS02 PRO 5.2.1.8 GO:0000413 ... P62937 8652512
    77885 2cym:A (2.0) BS01 HEM ? GO:0009055 ... P00131 1663945
    77886 2cym:A (2.0) BS02 HEM ? GO:0009055 ... P00131 1663945
    77887 2cym:A (2.0) BS03 HEM ? GO:0009055 ... P00131 1663945
    77888 2cym:A (2.0) BS04 HEM ? GO:0009055 ... P00131 1663945
    77889 2cyp:A (1.7) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 6092361
    77890 2cyy:A (1.8) BS01 CA ? GO:0005515 ... O59188 N/A
    77891 2cyy:A (1.8) BS02 CA ? GO:0005515 ... O59188 N/A
    77892 2cyy:A (1.8) BS03 GLN ? GO:0005515 ... O59188 N/A
    77893 2cyz:A (1.55) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    77894 2cz0:A (1.5) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    77895 2cz0:A (1.5) BS02 BUA 4.2.1.84 GO:0003824 ... P13448 N/A
    77896 2cz1:A (1.39) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    77897 2cz1:A (1.39) BS02 BUA 4.2.1.84 GO:0003824 ... P13448 N/A
    77898 2cz1:B (1.39) BS01 BUA 4.2.1.84 GO:0018822 ... P13449 N/A
    77899 2cz2:A (1.4) BS01 GSH 2.5.1.18
    5.2.1.2
    GO:0003824 ... Q9WVL0 N/A
    77900 2cz6:A (1.5) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    77901 2cz6:A (1.5) BS02 NO 4.2.1.84 GO:0003824 ... P13448 N/A
    77902 2cz6:B (1.5) BS01 CYI 4.2.1.84 GO:0018822 ... P13449 N/A
    77903 2cz7:A (1.8) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    77904 2cz7:A (1.8) BS02 NO 4.2.1.84 GO:0003824 ... P13448 N/A
    77905 2cz8:A (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77906 2cz8:A (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77907 2cz8:B (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77908 2cz8:B (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77909 2cz8:C (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77910 2cz8:C (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77911 2cz8:D (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77912 2cz8:D (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77913 2cz8:E (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77914 2cz8:E (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77915 2cz8:F (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77916 2cz8:F (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77917 2cz8:G (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77918 2cz8:G (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77919 2cz8:H (1.5) BS01 FAD ? N/A Q5SIE3 N/A
    77920 2cz8:H (1.5) BS02 FAD ? N/A Q5SIE3 N/A
    77921 2czc:A (2.0) BS01 NAD 1.2.1.59 GO:0004365 ... O59494 N/A
    77922 2czc:B (2.0) BS01 NAD 1.2.1.59 GO:0004365 ... O59494 N/A
    77923 2czc:C (2.0) BS01 NAD 1.2.1.59 GO:0004365 ... O59494 N/A
    77924 2czc:D (2.0) BS01 NAD 1.2.1.59 GO:0004365 ... O59494 N/A
    77925 2cze:A (1.85) BS01 U5P 4.1.1.23 GO:0004590 ... O58462 N/A
    77926 2cze:A (1.85) BS02 U5P 4.1.1.23 GO:0004590 ... O58462 N/A
    77927 2cze:B (1.85) BS01 U5P 4.1.1.23 GO:0004590 ... O58462 N/A
    77928 2cze:B (1.85) BS02 U5P 4.1.1.23 GO:0004590 ... O58462 N/A
    77929 2czf:A (1.85) BS01 XMP 4.1.1.23 GO:0004590 ... O58462 N/A
    77930 2czf:B (1.85) BS01 XMP 4.1.1.23 GO:0004590 ... O58462 N/A
    77931 2czh:B (2.7) BS01 PO4 3.1.3.25 GO:0005515 ... O14732 17340635
    77932 2czi:A (3.0) BS01 CA 3.1.3.25 GO:0005515 ... O14732 17340635
    77933 2czi:A (3.0) BS02 CA 3.1.3.25 GO:0005515 ... O14732 17340635
    77934 2czi:A (3.0) BS03 PO4 3.1.3.25 GO:0005515 ... O14732 17340635
    77935 2czj:A (3.01) BS01 rna ? GO:0003723 ... Q8RR57 17488812
    77936 2czj:A (3.01) BS02 rna ? GO:0003723 ... Q8RR57 17488812
    77937 2czj:C (3.01) BS01 rna ? GO:0003723 ... Q8RR57 17488812
    77938 2czj:C (3.01) BS02 rna ? GO:0003723 ... Q8RR57 17488812
    77939 2czj:E (3.01) BS01 rna ? GO:0003723 ... Q8RR57 17488812
    77940 2czj:E (3.01) BS02 rna ? GO:0003723 ... Q8RR57 17488812
    77941 2czj:G (3.01) BS01 rna ? GO:0003723 ... Q8RR57 17488812
    77942 2czj:G (3.01) BS02 rna ? GO:0003723 ... Q8RR57 17488812
    77943 2czl:A (1.55) BS01 TLA 4.1.-.- GO:0009234 ... Q5SI12 19602440
    77944 2czr:A (2.3) BS01 ZN ? N/A Q9V2W6 16322571
    77945 2czs:A (1.5) BS01 HEM ? N/A Q748S4 16156654
    77946 2czs:A (1.5) BS02 HEM ? N/A Q748S4 16156654
    77947 2czs:B (1.5) BS01 HEM ? N/A Q748S4 16156654
    77948 2czs:B (1.5) BS02 HEM ? N/A Q748S4 16156654
    77949 2czy:A (-1.00) BS01 peptide ? GO:0003714 ... Q62141 16288918
    77950 2d00:A (2.2) BS01 CA 3.6.3.14 GO:0005524 ... P74903 16281059
    77951 2d00:B (2.2) BS01 CA 3.6.3.14 GO:0005524 ... P74903 16281059
    77952 2d00:B (2.2) BS02 CA 3.6.3.14 GO:0005524 ... P74903 16281059
    77953 2d00:C (2.2) BS01 CA 3.6.3.14 GO:0005524 ... P74903 16281059
    77954 2d00:D (2.2) BS01 CA 3.6.3.14 GO:0005524 ... P74903 16281059
    77955 2d03:H (1.97) BS01 GOL N/A N/A N/A 16204891
    77956 2d03:H (1.97) BS02 GOL N/A N/A N/A 16204891
    77957 2d03:L (1.97) BS01 GOL N/A N/A N/A 16204891
    77958 2d06:A (2.3) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 16221673
    77959 2d06:A (2.3) BS02 EST 2.8.2.1 GO:0004062 ... P50225 16221673 MOAD: Ki=83.2uM
    BindingDB: Kd=1200nM
    77960 2d06:B (2.3) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 16221673
    77961 2d06:B (2.3) BS02 EST 2.8.2.1 GO:0004062 ... P50225 16221673 MOAD: Ki=83.2uM
    BindingDB: Kd=1200nM
    77962 2d09:A (1.8) BS01 HEM 1.14.19.69 GO:0004497 ... Q9FCA6 16239228
    77963 2d09:A (1.8) BS02 FLV 1.14.19.69 GO:0004497 ... Q9FCA6 16239228 MOAD: Kd=7.3uM
    77964 2d09:A (1.8) BS03 FLV 1.14.19.69 GO:0004497 ... Q9FCA6 16239228 MOAD: Kd=7.3uM
    77965 2d0b:A (2.1) BS01 MG 3.1.26.4 GO:0000287 ... Q6L6Q4 16343535
    77966 2d0c:A (2.6) BS01 MN 3.1.26.4 GO:0000287 ... Q6L6Q4 16343535
    77967 2d0d:A (1.65) BS01 CL 3.7.1.9 GO:0003824 ... P96965 16844437
    77968 2d0e:A (2.15) BS01 HEM 1.14.19.69 GO:0004497 ... Q9FCA6 16239228
    77969 2d0e:A (2.15) BS02 NQ 1.14.19.69 GO:0004497 ... Q9FCA6 16239228 MOAD: Kd=43uM
    77970 2d0e:A (2.15) BS03 NQ 1.14.19.69 GO:0004497 ... Q9FCA6 16239228 MOAD: Kd=43uM
    77971 2d0f:A (2.08) BS01 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77972 2d0f:A (2.08) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77973 2d0f:A (2.08) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77974 2d0f:A (2.08) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77975 2d0f:A (2.08) BS05 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77976 2d0f:A (2.08) BS06 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77977 2d0f:A (2.08) BS07 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77978 2d0f:A (2.08) BS08 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77979 2d0f:A (2.08) BS09 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77980 2d0g:A (2.6) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77981 2d0g:A (2.6) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77982 2d0g:A (2.6) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77983 2d0g:A (2.6) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77984 2d0g:A (2.6) BS05 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77985 2d0g:A (2.6) BS06 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77986 2d0g:A (2.6) BS07 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77987 2d0g:A (2.6) BS08 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77988 2d0g:A (2.6) BS09 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77989 2d0g:A (2.6) BS10 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77990 2d0g:A (2.6) BS11 BGC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77991 2d0g:A (2.6) BS12 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77992 2d0g:A (2.6) BS13 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77993 2d0g:A (2.6) BS14 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    77994 2d0h:A (2.1) BS01 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77995 2d0h:A (2.1) BS02 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77996 2d0h:A (2.1) BS03 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77997 2d0h:A (2.1) BS04 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77998 2d0h:A (2.1) BS05 GLC 3.2.1.135 GO:0004553 ... Q60053 16302977
    77999 2d0h:A (2.1) BS06 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    78000 2d0h:A (2.1) BS07 CA 3.2.1.135 GO:0004553 ... Q60053 16302977

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).