SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    78801 2dcn:A (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78802 2dcn:A (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78803 2dcn:B (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78804 2dcn:B (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78805 2dcn:C (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78806 2dcn:C (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78807 2dcn:D (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78808 2dcn:D (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78809 2dcn:E (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78810 2dcn:E (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78811 2dcn:F (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78812 2dcn:F (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78813 2dcn:G (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78814 2dcn:G (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78815 2dcn:H (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78816 2dcn:H (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78817 2dcn:I (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78818 2dcn:I (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78819 2dcn:J (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78820 2dcn:J (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78821 2dcn:K (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78822 2dcn:K (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78823 2dcn:L (2.25) BS01 CKP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78824 2dcn:L (2.25) BS02 ADP 2.7.1.45 GO:0008673 ... Q96XN9 N/A
    78825 2dcu:A (3.4) BS01 MG 3.6.5.3 GO:0000049 ... Q8U082 16924118
    78826 2dcu:A (3.4) BS02 ZN 3.6.5.3 GO:0000049 ... Q8U082 16924118
    78827 2dcu:A (3.4) BS03 GDP 3.6.5.3 GO:0000049 ... Q8U082 16924118
    78828 2dcu:B (3.4) BS01 ZN ? GO:0003743 ... Q8U3I5 16924118
    78829 2dd4:B (2.06) BS01 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78830 2dd4:B (2.06) BS02 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78831 2dd4:E (2.06) BS01 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78832 2dd4:E (2.06) BS02 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78833 2dd4:H (2.06) BS01 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78834 2dd4:H (2.06) BS02 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78835 2dd4:H (2.06) BS03 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78836 2dd4:K (2.06) BS01 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78837 2dd4:K (2.06) BS02 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78838 2dd4:K (2.06) BS03 FRU 3.5.5.8 GO:0018760 ... O66186 17222425
    78839 2dd5:C (2.0) BS01 3CO 3.5.5.8 GO:0003824 ... O66188 17222425
    78840 2dd5:F (2.0) BS01 3CO 3.5.5.8 GO:0003824 ... O66188 17222425
    78841 2dd5:I (2.0) BS01 3CO 3.5.5.8 GO:0003824 ... O66188 17222425
    78842 2dd5:L (2.0) BS01 3CO 3.5.5.8 GO:0003824 ... O66188 17222425
    78843 2ddf:A (1.7) BS01 ZN 3.4.24.86 GO:0004222 ... P78536 16459338
    78844 2ddf:A (1.7) BS02 CA 3.4.24.86 GO:0004222 ... P78536 16459338
    78845 2ddf:A (1.7) BS03 INN 3.4.24.86 GO:0004222 ... P78536 16459338 MOAD: ic50=41nM
    78846 2ddf:B (1.7) BS01 ZN 3.4.24.86 GO:0004222 ... P78536 16459338
    78847 2ddf:B (1.7) BS02 INN 3.4.24.86 GO:0004222 ... P78536 16459338 MOAD: ic50=41nM
    78848 2ddg:A (2.1) BS01 dna 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78849 2ddg:A (2.1) BS02 dna 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78850 2ddg:A (2.1) BS03 SF4 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78851 2ddg:A (2.1) BS04 2HP 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78852 2ddh:A (2.07) BS01 FAD 1.3.3.6 GO:0000038 ... P07872 16672280
    78853 2ddh:A (2.07) BS02 HXD 1.3.3.6 GO:0000038 ... P07872 16672280
    78854 2ddo:A (2.6) BS01 ATP 2.7.1.35 GO:0000287 ... P40191 16740960
    78855 2ddq:L (2.35) BS01 HRB N/A N/A N/A 16603628
    78856 2ddr:A (1.4) BS01 CA 3.1.4.12 GO:0003824 ... P11889 16595670
    78857 2ddr:B (1.4) BS01 CA 3.1.4.12 GO:0003824 ... P11889 16595670
    78858 2ddr:C (1.4) BS01 CA 3.1.4.12 GO:0003824 ... P11889 16595670
    78859 2ddr:D (1.4) BS01 CA 3.1.4.12 GO:0003824 ... P11889 16595670
    78860 2dds:A (1.8) BS01 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78861 2dds:B (1.8) BS01 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78862 2dds:B (1.8) BS02 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78863 2dds:C (1.8) BS01 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78864 2dds:D (1.8) BS01 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78865 2dds:D (1.8) BS02 CO 3.1.4.12 GO:0003824 ... P11889 16595670
    78866 2ddt:A (1.8) BS01 MG 3.1.4.12 GO:0003824 ... P11889 16595670
    78867 2ddt:B (1.8) BS01 MG 3.1.4.12 GO:0003824 ... P11889 16595670
    78868 2ddu:A (2.05) BS01 CA 3.4.21.- GO:0001764 ... Q60841 16858396
    78869 2ddw:A (3.2) BS01 PXL 2.7.1.35 GO:0000287 ... P40191 16740960
    78870 2ddw:B (3.2) BS01 PXL 2.7.1.35 GO:0000287 ... P40191 16740960
    78871 2ddx:A (0.86) BS01 MG 3.2.1.32 GO:0004553 ... D5MP61 N/A
    78872 2ddy:A (-1.00) BS01 CA 3.4.24.23 GO:0004222 ... P09237 N/A
    78873 2ddy:A (-1.00) BS02 CA 3.4.24.23 GO:0004222 ... P09237 N/A
    78874 2ddy:A (-1.00) BS03 ZN 3.4.24.23 GO:0004222 ... P09237 N/A
    78875 2ddy:A (-1.00) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 N/A
    78876 2ddy:A (-1.00) BS05 MDW 3.4.24.23 GO:0004222 ... P09237 N/A BindingDB: IC50=3162nM
    78877 2de3:A (1.6) BS01 OBP 3.13.1.3 GO:0005737 ... P54997 16891315
    78878 2de3:B (1.6) BS01 OBP 3.13.1.3 GO:0005737 ... P54997 16891315
    78879 2de4:A (1.8) BS01 BPS 3.13.1.3 GO:0005737 ... P54997 16891315
    78880 2de4:B (1.8) BS01 BPS 3.13.1.3 GO:0005737 ... P54997 16891315
    78881 2de5:A (1.9) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78882 2de5:A (1.9) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78883 2de5:B (1.9) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78884 2de5:B (1.9) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78885 2de5:C (1.9) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78886 2de5:C (1.9) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78887 2de5:D (1.9) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78888 2de5:E (1.9) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78889 2de5:F (1.9) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78890 2de6:A (1.8) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78891 2de6:A (1.8) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78892 2de6:B (1.8) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78893 2de6:B (1.8) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78894 2de6:C (1.8) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78895 2de6:C (1.8) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78896 2de6:D (1.8) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78897 2de6:E (1.8) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78898 2de6:F (1.8) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78899 2de7:A (2.0) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78900 2de7:A (2.0) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78901 2de7:B (2.0) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78902 2de7:B (2.0) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78903 2de7:B (2.0) BS03 9CA 1.14.12.- GO:0051537 ... Q84II6 17161368
    78904 2de7:C (2.0) BS01 FE2 1.14.12.- GO:0051537 ... Q84II6 17161368
    78905 2de7:C (2.0) BS02 FES 1.14.12.- GO:0051537 ... Q84II6 17161368
    78906 2de7:C (2.0) BS03 9CA 1.14.12.- GO:0051537 ... Q84II6 17161368
    78907 2de7:D (2.0) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78908 2de7:E (2.0) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78909 2de7:F (2.0) BS01 FES 1.14.12.- GO:0008901 ... Q8GI16 17161368
    78910 2de9:A (1.3) BS01 SO4 3.4.21.36 GO:0004252 ... P00772 16820677
    78911 2de9:A (1.3) BS02 SO4 3.4.21.36 GO:0004252 ... P00772 16820677
    78912 2dea:A (1.24) BS01 ZN 3.4.11.10 GO:0006508 ... Q01693 16596389
    78913 2dea:A (1.24) BS02 ZN 3.4.11.10 GO:0006508 ... Q01693 16596389
    78914 2deb:A (1.6) BS01 COA 2.3.1.21 GO:0001676 ... P18886 16615901
    78915 2deb:B (1.6) BS01 COA 2.3.1.21 GO:0001676 ... P18886 16615901
    78916 2def:A (-1.00) BS01 NI 3.5.1.88 GO:0042586 ... P0A6K3 9665852
    78917 2dei:A (1.7) BS01 GLA 2.7.1.6 GO:0000287 ... O58107 N/A
    78918 2dei:A (1.7) BS02 MAP 2.7.1.6 GO:0000287 ... O58107 N/A
    78919 2dej:A (1.5) BS01 GLA 2.7.1.6 GO:0000287 ... O58107 N/A
    78920 2dej:A (1.5) BS02 APW 2.7.1.6 GO:0000287 ... O58107 N/A
    78921 2dek:A (1.65) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    78922 2dem:A (1.95) BS01 dna 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78923 2dem:A (1.95) BS02 dna 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78924 2dem:A (1.95) BS03 SF4 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78925 2dem:A (1.95) BS04 2HP 3.2.2.- GO:0004844 ... Q5SJ65 17870091
    78926 2deq:A (1.85) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    78927 2deq:B (1.85) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    78928 2der:A (3.1) BS01 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78929 2der:B (3.1) BS01 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78930 2det:A (3.4) BS01 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78931 2deu:A (3.4) BS01 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78932 2deu:A (3.4) BS02 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78933 2deu:A (3.4) BS03 AMP 2.8.1.13 GO:0002143 ... P25745 16871210
    78934 2deu:B (3.4) BS01 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78935 2deu:B (3.4) BS02 rna 2.8.1.13 GO:0002143 ... P25745 16871210
    78936 2deu:B (3.4) BS03 AMP 2.8.1.13 GO:0002143 ... P25745 16871210
    78937 2dew:X (2.1) BS01 peptide 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78938 2dew:X (2.1) BS02 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78939 2dew:X (2.1) BS03 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78940 2dew:X (2.1) BS04 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78941 2dew:X (2.1) BS05 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78942 2dew:X (2.1) BS06 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78943 2dex:X (2.1) BS01 peptide 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78944 2dex:X (2.1) BS02 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78945 2dex:X (2.1) BS03 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78946 2dex:X (2.1) BS04 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78947 2dex:X (2.1) BS05 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78948 2dex:X (2.1) BS06 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78949 2dey:X (2.25) BS01 peptide 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78950 2dey:X (2.25) BS02 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78951 2dey:X (2.25) BS03 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78952 2dey:X (2.25) BS04 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78953 2dey:X (2.25) BS05 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78954 2dey:X (2.25) BS06 CA 3.5.3.15 GO:0004668 ... Q9UM07 16567635
    78955 2df3:A (1.9) BS01 SIA ? N/A Q9Y286 16623661
    78956 2df3:A (1.9) BS02 CYS ? N/A Q9Y286 16623661
    78957 2df4:B (3.2) BS01 MN 6.3.5.- GO:0003824 ... P64201 16809541
    78958 2df4:B (3.2) BS02 MN 6.3.5.- GO:0003824 ... P64201 16809541
    78959 2df6:A (1.3) BS01 peptide ? N/A O55043 16527308
    78960 2df6:B (1.3) BS01 peptide ? N/A O55043 16527308
    78961 2df6:B (1.3) BS02 peptide ? N/A O55043 16527308
    78962 2df7:A (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78963 2df7:B (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78964 2df7:C (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78965 2df7:E (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78966 2df7:F (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78967 2df7:G (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78968 2df7:H (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78969 2df7:I (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78970 2df7:J (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78971 2df7:K (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78972 2df7:L (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78973 2df7:M (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78974 2df7:N (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78975 2df7:O (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78976 2df7:P (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78977 2df7:Q (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78978 2df7:R (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78979 2df7:S (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78980 2df7:T (2.6) BS01 CA 3.4.21.- GO:0005198 ... Q9WR38 16677827
    78981 2df8:A (1.5) BS01 F1P ? GO:0097367 ... O58246 N/A
    78982 2df8:B (1.5) BS01 F1P ? GO:0097367 ... O58246 N/A
    78983 2dfb:A (1.11) BS01 IOD 3.2.1.8 GO:0004553 ... P36217 16790934
    78984 2dfb:A (1.11) BS02 IOD 3.2.1.8 GO:0004553 ... P36217 16790934
    78985 2dfb:A (1.11) BS03 IOD 3.2.1.8 GO:0004553 ... P36217 16790934
    78986 2dfd:A (1.9) BS01 NAD 1.1.1.37 GO:0003723 ... P40926 N/A
    78987 2dfd:A (1.9) BS02 HIS 1.1.1.37 GO:0003723 ... P40926 N/A
    78988 2dfd:B (1.9) BS01 NAD 1.1.1.37 GO:0003723 ... P40926 N/A
    78989 2dfd:B (1.9) BS02 HIS 1.1.1.37 GO:0003723 ... P40926 N/A
    78990 2dfd:C (1.9) BS01 NAD 1.1.1.37 GO:0003723 ... P40926 N/A
    78991 2dfd:C (1.9) BS02 HIS 1.1.1.37 GO:0003723 ... P40926 N/A
    78992 2dfd:D (1.9) BS01 NAD 1.1.1.37 GO:0003723 ... P40926 N/A
    78993 2dfi:A (2.1) BS01 CO 3.4.11.18 GO:0004177 ... P56218 17510955
    78994 2dfi:A (2.1) BS02 CO 3.4.11.18 GO:0004177 ... P56218 17510955
    78995 2dfi:B (2.1) BS01 CO 3.4.11.18 GO:0004177 ... P56218 17510955
    78996 2dfi:B (2.1) BS02 CO 3.4.11.18 GO:0004177 ... P56218 17510955
    78997 2dfj:A (2.72) BS01 MN 3.6.1.41 GO:0008803 ... Q83SQ2 17006950
    78998 2dfj:A (2.72) BS02 MN 3.6.1.41 GO:0008803 ... Q83SQ2 17006950
    78999 2dfj:B (2.72) BS01 MN 3.6.1.41 GO:0008803 ... Q83SQ2 17006950
    79000 2dfj:B (2.72) BS02 MN 3.6.1.41 GO:0008803 ... Q83SQ2 17006950

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).