SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    79601 2du1:C (2.6) BS02 CA ? GO:0030246 ... O24313 17057334
    79602 2du1:C (2.6) BS03 MN ? GO:0030246 ... O24313 17057334
    79603 2du1:D (2.6) BS01 MGC ? GO:0030246 ... O24313 17057334
    79604 2du1:D (2.6) BS02 CA ? GO:0030246 ... O24313 17057334
    79605 2du1:D (2.6) BS03 MN ? GO:0030246 ... O24313 17057334
    79606 2du2:A (2.1) BS01 FMN 1.1.3.- GO:0010181 ... Q44467 17007814
    79607 2du2:B (2.1) BS01 FMN 1.1.3.- GO:0010181 ... Q44467 17007814
    79608 2du2:C (2.1) BS01 FMN 1.1.3.- GO:0010181 ... Q44467 17007814
    79609 2du2:D (2.1) BS01 FMN 1.1.3.- GO:0010181 ... Q44467 17007814
    79610 2du3:A (2.6) BS01 rna 6.1.1.27 GO:0000049 ... O30126 17351629
    79611 2du3:A (2.6) BS02 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79612 2du3:B (2.6) BS01 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79613 2du4:A (2.8) BS01 rna 6.1.1.27 GO:0000049 ... O30126 17351629
    79614 2du5:A (3.2) BS01 rna 6.1.1.27 GO:0000049 ... O30126 17351629
    79615 2du5:A (3.2) BS02 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79616 2du5:B (3.2) BS01 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79617 2du6:A (3.3) BS01 rna 6.1.1.27 GO:0000049 ... O30126 17351629
    79618 2du6:A (3.3) BS02 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79619 2du6:B (3.3) BS01 SEP 6.1.1.27 GO:0000049 ... O30126 17351629
    79620 2du8:A (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P14920 17088322 MOAD: Kd=8uM
    79621 2du8:B (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P14920 17088322 MOAD: Kd=8uM
    79622 2du8:G (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P14920 17088322 MOAD: Kd=8uM
    79623 2du8:J (2.5) BS01 FAD 1.4.3.3 GO:0003884 ... P14920 17088322 MOAD: Kd=8uM
    79624 2dua:A (2.0) BS01 XYS 3.11.1.3 GO:0003824 ... Q84G06 16981709
    79625 2dua:A (2.0) BS02 OXL 3.11.1.3 GO:0003824 ... Q84G06 16981709 MOAD: Ki=17uM
    79626 2dub:A (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79627 2dub:B (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79628 2dub:B (2.4) BS02 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79629 2dub:C (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79630 2dub:D (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79631 2dub:E (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79632 2dub:F (2.4) BS01 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79633 2dub:F (2.4) BS02 CO8 4.2.1.17
    5.3.3.8
    GO:0003824 ... P14604 9480773
    79634 2duj:A (1.67) BS01 peptide 3.4.21.64 GO:0004252 ... P06873 N/A
    79635 2duj:A (1.67) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    79636 2duo:A (1.8) BS01 CA ? GO:0016020 ... P49256 17652092
    79637 2duo:B (1.8) BS01 CA ? GO:0016020 ... P49256 17652092
    79638 2dup:A (2.1) BS01 CA ? GO:0016020 ... P49256 17652092
    79639 2duq:A (1.8) BS01 MAN ? GO:0016020 ... P49256 17652092
    79640 2duq:A (1.8) BS02 CA ? GO:0016020 ... P49256 17652092
    79641 2duq:B (1.8) BS01 MAN ? GO:0016020 ... P49256 17652092
    79642 2duq:B (1.8) BS02 CA ? GO:0016020 ... P49256 17652092
    79643 2dur:A (1.65) BS01 MAN ? GO:0016020 ... P49256 17652092
    79644 2dur:A (1.65) BS02 MAN ? GO:0016020 ... P49256 17652092
    79645 2dur:A (1.65) BS03 CA ? GO:0016020 ... P49256 17652092
    79646 2dur:B (1.65) BS01 MAN ? GO:0016020 ... P49256 17652092
    79647 2dur:B (1.65) BS02 MAN ? GO:0016020 ... P49256 17652092
    79648 2dur:B (1.65) BS03 CA ? GO:0016020 ... P49256 17652092
    79649 2duu:A (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79650 2duu:B (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79651 2duu:O (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79652 2duu:P (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79653 2duu:Q (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79654 2duu:R (2.9) BS01 SO4 1.2.1.- GO:0006006 ... Q9R6W2 16880542
    79655 2duv:A (2.2) BS01 371 2.7.11.22 GO:0000082 ... P24941 17178224 MOAD: ic50=0.087uM
    BindingDB: IC50=87nM
    79656 2dux:A (1.6) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371
    79657 2dux:A (1.6) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    79658 2duz:A (1.6) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371
    79659 2duz:A (1.6) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    79660 2dv0:A (1.62) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371
    79661 2dv0:A (1.62) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    79662 2dv3:A (1.9) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    79663 2dv4:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    79664 2dv5:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    79665 2dv6:A (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79666 2dv6:A (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79667 2dv6:A (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79668 2dv6:B (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79669 2dv6:B (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79670 2dv6:B (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79671 2dv6:C (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79672 2dv6:C (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79673 2dv6:C (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79674 2dv6:D (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79675 2dv6:D (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79676 2dv6:D (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79677 2dv6:E (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79678 2dv6:E (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79679 2dv6:E (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79680 2dv6:F (2.2) BS01 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79681 2dv6:F (2.2) BS02 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79682 2dv6:F (2.2) BS03 CU 1.7.2.1 GO:0005507 ... Q8KKH4 17360521
    79683 2dv7:A (2.3) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    79684 2dv9:A (2.48) BS01 GAL ? GO:0030246 ... P02872 17057347
    79685 2dv9:A (2.48) BS02 CA ? GO:0030246 ... P02872 17057347
    79686 2dv9:A (2.48) BS03 MN ? GO:0030246 ... P02872 17057347
    79687 2dv9:B (2.48) BS01 GAL ? GO:0030246 ... P02872 17057347
    79688 2dv9:B (2.48) BS02 GAL ? GO:0030246 ... P02872 17057347
    79689 2dv9:B (2.48) BS03 CA ? GO:0030246 ... P02872 17057347
    79690 2dv9:B (2.48) BS04 MN ? GO:0030246 ... P02872 17057347
    79691 2dv9:C (2.48) BS01 GAL ? GO:0030246 ... P02872 17057347
    79692 2dv9:C (2.48) BS02 GAL ? GO:0030246 ... P02872 17057347
    79693 2dv9:C (2.48) BS03 CA ? GO:0030246 ... P02872 17057347
    79694 2dv9:C (2.48) BS04 MN ? GO:0030246 ... P02872 17057347
    79695 2dv9:D (2.48) BS01 GAL ? GO:0030246 ... P02872 17057347
    79696 2dv9:D (2.48) BS02 GAL ? GO:0030246 ... P02872 17057347
    79697 2dv9:D (2.48) BS03 CA ? GO:0030246 ... P02872 17057347
    79698 2dv9:D (2.48) BS04 MN ? GO:0030246 ... P02872 17057347
    79699 2dva:A (2.2) BS01 MGC ? GO:0030246 ... P02872 17057347
    79700 2dva:A (2.2) BS02 GAL ? GO:0030246 ... P02872 17057347
    79701 2dva:A (2.2) BS03 CA ? GO:0030246 ... P02872 17057347
    79702 2dva:A (2.2) BS04 MN ? GO:0030246 ... P02872 17057347
    79703 2dva:B (2.2) BS01 MGC ? GO:0030246 ... P02872 17057347
    79704 2dva:B (2.2) BS02 GAL ? GO:0030246 ... P02872 17057347
    79705 2dva:B (2.2) BS03 CA ? GO:0030246 ... P02872 17057347
    79706 2dva:B (2.2) BS04 MN ? GO:0030246 ... P02872 17057347
    79707 2dva:C (2.2) BS01 MGC ? GO:0030246 ... P02872 17057347
    79708 2dva:C (2.2) BS02 GAL ? GO:0030246 ... P02872 17057347
    79709 2dva:C (2.2) BS03 CA ? GO:0030246 ... P02872 17057347
    79710 2dva:C (2.2) BS04 MN ? GO:0030246 ... P02872 17057347
    79711 2dva:D (2.2) BS01 MGC ? GO:0030246 ... P02872 17057347
    79712 2dva:D (2.2) BS02 GAL ? GO:0030246 ... P02872 17057347
    79713 2dva:D (2.2) BS03 CA ? GO:0030246 ... P02872 17057347
    79714 2dva:D (2.2) BS04 MN ? GO:0030246 ... P02872 17057347
    79715 2dvb:A (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79716 2dvb:A (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79717 2dvb:A (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79718 2dvb:B (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79719 2dvb:B (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79720 2dvb:B (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79721 2dvb:C (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79722 2dvb:C (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79723 2dvb:C (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79724 2dvb:D (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79725 2dvb:D (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79726 2dvb:D (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79727 2dvc:A (3.0) BS01 GLC 3.4.21.- GO:0005576 ... P24627 N/A
    79728 2dvc:A (3.0) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    79729 2dvc:A (3.0) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    79730 2dvd:A (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79731 2dvd:A (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79732 2dvd:A (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79733 2dvd:B (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79734 2dvd:B (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79735 2dvd:B (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79736 2dvd:C (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79737 2dvd:C (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79738 2dvd:C (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79739 2dvd:D (2.25) BS01 GAL ? GO:0030246 ... P02872 17057347
    79740 2dvd:D (2.25) BS02 CA ? GO:0030246 ... P02872 17057347
    79741 2dvd:D (2.25) BS03 MN ? GO:0030246 ... P02872 17057347
    79742 2dve:A (1.6) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    79743 2dve:B (1.6) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    79744 2dvf:A (2.74) BS01 CA ? GO:0030246 ... P02872 17057347
    79745 2dvf:A (2.74) BS02 MN ? GO:0030246 ... P02872 17057347
    79746 2dvf:B (2.74) BS01 CA ? GO:0030246 ... P02872 17057347
    79747 2dvf:B (2.74) BS02 MN ? GO:0030246 ... P02872 17057347
    79748 2dvf:C (2.74) BS01 CA ? GO:0030246 ... P02872 17057347
    79749 2dvf:C (2.74) BS02 MN ? GO:0030246 ... P02872 17057347
    79750 2dvf:D (2.74) BS01 CA ? GO:0030246 ... P02872 17057347
    79751 2dvf:D (2.74) BS02 MN ? GO:0030246 ... P02872 17057347
    79752 2dvg:A (2.78) BS01 GLA ? GO:0030246 ... P02872 17057347
    79753 2dvg:A (2.78) BS02 CA ? GO:0030246 ... P02872 17057347
    79754 2dvg:A (2.78) BS03 MN ? GO:0030246 ... P02872 17057347
    79755 2dvg:B (2.78) BS01 GLA ? GO:0030246 ... P02872 17057347
    79756 2dvg:B (2.78) BS02 CA ? GO:0030246 ... P02872 17057347
    79757 2dvg:B (2.78) BS03 MN ? GO:0030246 ... P02872 17057347
    79758 2dvg:C (2.78) BS01 GLA ? GO:0030246 ... P02872 17057347
    79759 2dvg:C (2.78) BS02 CA ? GO:0030246 ... P02872 17057347
    79760 2dvg:C (2.78) BS03 MN ? GO:0030246 ... P02872 17057347
    79761 2dvg:D (2.78) BS01 GLA ? GO:0030246 ... P02872 17057347
    79762 2dvg:D (2.78) BS02 CA ? GO:0030246 ... P02872 17057347
    79763 2dvg:D (2.78) BS03 MN ? GO:0030246 ... P02872 17057347
    79764 2dvh:A (-1.00) BS01 HEC ? GO:0009055 ... P04032 7844834
    79765 2dvi:A (2.61) BS01 rna 2.7.7.72 GO:0000049 ... O28126 17051158
    79766 2dvi:A (2.61) BS02 MG 2.7.7.72 GO:0000049 ... O28126 17051158
    79767 2dvi:A (2.61) BS03 CTP 2.7.7.72 GO:0000049 ... O28126 17051158
    79768 2dvl:A (2.5) BS01 FAD ? GO:0003995 ... Q5SH14 N/A
    79769 2dvl:B (2.5) BS01 FAD ? GO:0003995 ... Q5SH14 N/A
    79770 2dvm:A (1.6) BS01 NAD 1.1.1.38 GO:0004470 ... O59029 N/A
    79771 2dvm:B (1.6) BS01 NAD 1.1.1.38 GO:0004470 ... O59029 N/A
    79772 2dvm:C (1.6) BS01 NAD 1.1.1.38 GO:0004470 ... O59029 N/A
    79773 2dvm:D (1.6) BS01 NAD 1.1.1.38 GO:0004470 ... O59029 N/A
    79774 2dvn:A (1.6) BS01 IMP 3.6.1.66 GO:0005737 ... O59580 18062990
    79775 2dvn:B (1.6) BS01 IMP 3.6.1.66 GO:0005737 ... O59580 18062990
    79776 2dvo:A (2.21) BS01 ITT 3.6.1.66 GO:0005737 ... O59580 18062990
    79777 2dvq:A (2.04) BS01 peptide ? N/A P25440 20048151
    79778 2dvq:A (2.04) BS02 peptide ? N/A P25440 20048151
    79779 2dvq:B (2.04) BS01 peptide ? N/A P25440 20048151
    79780 2dvr:A (2.3) BS01 peptide ? N/A P25440 20048151
    79781 2dvr:A (2.3) BS02 peptide ? N/A P25440 20048151
    79782 2dvr:B (2.3) BS01 peptide ? N/A P25440 20048151
    79783 2dvs:A (2.04) BS01 peptide ? N/A P25440 20048151
    79784 2dvs:B (2.04) BS01 peptide ? N/A P25440 20048151
    79785 2dvt:A (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79786 2dvt:B (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79787 2dvt:C (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79788 2dvt:D (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79789 2dvu:A (1.9) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79790 2dvu:A (1.9) BS02 GRE 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79791 2dvu:B (1.9) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79792 2dvu:B (1.9) BS02 GRE 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79793 2dvu:C (1.9) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79794 2dvu:C (1.9) BS02 GRE 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79795 2dvu:D (1.9) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79796 2dvu:D (1.9) BS02 GRE 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79797 2dvx:A (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79798 2dvx:A (1.7) BS02 23A 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79799 2dvx:B (1.7) BS01 ZN 4.1.1.103 GO:0005737 ... Q60GU1 N/A
    79800 2dvx:B (1.7) BS02 23A 4.1.1.103 GO:0005737 ... Q60GU1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).