SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    80001 2dyr:A (1.8) BS02 MG 7.1.1.9 GO:0004129 ... P00396 17332748
    80002 2dyr:A (1.8) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80003 2dyr:A (1.8) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80004 2dyr:A (1.8) BS05 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80005 2dyr:A (1.8) BS06 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80006 2dyr:A (1.8) BS07 CDL 7.1.1.9 GO:0004129 ... P00396 17332748
    80007 2dyr:B (1.8) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 17332748
    80008 2dyr:B (1.8) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 17332748
    80009 2dyr:B (1.8) BS03 PSC 7.1.1.9 GO:0004129 ... P68530 17332748
    80010 2dyr:B (1.8) BS04 CDL 7.1.1.9 GO:0004129 ... P68530 17332748
    80011 2dyr:C (1.8) BS01 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80012 2dyr:C (1.8) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 17332748
    80013 2dyr:C (1.8) BS03 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80014 2dyr:C (1.8) BS04 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80015 2dyr:C (1.8) BS05 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80016 2dyr:C (1.8) BS06 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80017 2dyr:C (1.8) BS07 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80018 2dyr:C (1.8) BS08 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80019 2dyr:C (1.8) BS09 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80020 2dyr:E (1.8) BS01 PSC 1.9.3.1 GO:0005743 ... P00426 17332748
    80021 2dyr:F (1.8) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17332748
    80022 2dyr:G (1.8) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17332748
    80023 2dyr:G (1.8) BS02 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80024 2dyr:G (1.8) BS03 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80025 2dyr:G (1.8) BS04 CDL 1.9.3.1 GO:0005743 ... P07471 17332748
    80026 2dyr:G (1.8) BS05 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80027 2dyr:I (1.8) BS01 PSC 1.9.3.1 GO:0005743 ... P04038 17332748
    80028 2dyr:M (1.8) BS01 PGV 1.9.3.1 GO:0006123 ... P10175 17332748
    80029 2dyr:M (1.8) BS02 DMU 1.9.3.1 GO:0006123 ... P10175 17332748
    80030 2dyr:N (1.8) BS01 CDL 7.1.1.9 GO:0004129 ... P00396 17332748
    80031 2dyr:N (1.8) BS02 CU 7.1.1.9 GO:0004129 ... P00396 17332748
    80032 2dyr:N (1.8) BS03 MG 7.1.1.9 GO:0004129 ... P00396 17332748
    80033 2dyr:N (1.8) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80034 2dyr:N (1.8) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80035 2dyr:N (1.8) BS06 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80036 2dyr:N (1.8) BS07 PSC 7.1.1.9 GO:0004129 ... P00396 17332748
    80037 2dyr:N (1.8) BS08 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80038 2dyr:O (1.8) BS01 CDL 7.1.1.9 GO:0004129 ... P68530 17332748
    80039 2dyr:O (1.8) BS02 HEA 7.1.1.9 GO:0004129 ... P68530 17332748
    80040 2dyr:O (1.8) BS03 CUA 7.1.1.9 GO:0004129 ... P68530 17332748
    80041 2dyr:O (1.8) BS04 PSC 7.1.1.9 GO:0004129 ... P68530 17332748
    80042 2dyr:P (1.8) BS01 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80043 2dyr:P (1.8) BS02 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80044 2dyr:P (1.8) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 17332748
    80045 2dyr:P (1.8) BS04 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80046 2dyr:P (1.8) BS05 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80047 2dyr:P (1.8) BS06 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80048 2dyr:P (1.8) BS07 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80049 2dyr:P (1.8) BS08 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80050 2dyr:P (1.8) BS09 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80051 2dyr:R (1.8) BS01 PSC 1.9.3.1 GO:0005743 ... P00426 17332748
    80052 2dyr:S (1.8) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17332748
    80053 2dyr:T (1.8) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17332748
    80054 2dyr:T (1.8) BS02 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80055 2dyr:T (1.8) BS03 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80056 2dyr:T (1.8) BS04 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80057 2dyr:T (1.8) BS05 CDL 1.9.3.1 GO:0005743 ... P07471 17332748
    80058 2dyr:V (1.8) BS01 PSC 1.9.3.1 GO:0005743 ... P04038 17332748
    80059 2dyr:Z (1.8) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 17332748
    80060 2dyr:Z (1.8) BS02 PGV 1.9.3.1 GO:0006123 ... P10175 17332748
    80061 2dys:A (2.2) BS01 CU 7.1.1.9 GO:0004129 ... P00396 17332748
    80062 2dys:A (2.2) BS02 MG 7.1.1.9 GO:0004129 ... P00396 17332748
    80063 2dys:A (2.2) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80064 2dys:A (2.2) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80065 2dys:A (2.2) BS05 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80066 2dys:A (2.2) BS06 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80067 2dys:A (2.2) BS07 PSC 7.1.1.9 GO:0004129 ... P00396 17332748
    80068 2dys:A (2.2) BS08 DCW 7.1.1.9 GO:0004129 ... P00396 17332748
    80069 2dys:A (2.2) BS09 CDL 7.1.1.9 GO:0004129 ... P00396 17332748
    80070 2dys:B (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 17332748
    80071 2dys:B (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 17332748
    80072 2dys:B (2.2) BS03 PSC 7.1.1.9 GO:0004129 ... P68530 17332748
    80073 2dys:B (2.2) BS04 CDL 7.1.1.9 GO:0004129 ... P68530 17332748
    80074 2dys:C (2.2) BS01 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80075 2dys:C (2.2) BS02 DCW 7.1.1.9 GO:0004129 ... P00415 17332748
    80076 2dys:C (2.2) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 17332748
    80077 2dys:C (2.2) BS04 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80078 2dys:C (2.2) BS05 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80079 2dys:C (2.2) BS06 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80080 2dys:C (2.2) BS07 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80081 2dys:C (2.2) BS08 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80082 2dys:C (2.2) BS09 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80083 2dys:C (2.2) BS10 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80084 2dys:D (2.2) BS01 PGV 1.9.3.1 GO:0006123 ... P00423 17332748
    80085 2dys:E (2.2) BS01 PSC 1.9.3.1 GO:0005743 ... P00426 17332748
    80086 2dys:F (2.2) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17332748
    80087 2dys:G (2.2) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17332748
    80088 2dys:G (2.2) BS02 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80089 2dys:G (2.2) BS03 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80090 2dys:G (2.2) BS04 CDL 1.9.3.1 GO:0005743 ... P07471 17332748
    80091 2dys:G (2.2) BS05 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80092 2dys:I (2.2) BS01 PSC 1.9.3.1 GO:0005743 ... P04038 17332748
    80093 2dys:M (2.2) BS01 PGV 1.9.3.1 GO:0006123 ... P10175 17332748
    80094 2dys:M (2.2) BS02 DMU 1.9.3.1 GO:0006123 ... P10175 17332748
    80095 2dys:N (2.2) BS01 CDL 7.1.1.9 GO:0004129 ... P00396 17332748
    80096 2dys:N (2.2) BS02 CU 7.1.1.9 GO:0004129 ... P00396 17332748
    80097 2dys:N (2.2) BS03 MG 7.1.1.9 GO:0004129 ... P00396 17332748
    80098 2dys:N (2.2) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80099 2dys:N (2.2) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 17332748
    80100 2dys:N (2.2) BS06 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80101 2dys:N (2.2) BS07 PGV 7.1.1.9 GO:0004129 ... P00396 17332748
    80102 2dys:N (2.2) BS08 PSC 7.1.1.9 GO:0004129 ... P00396 17332748
    80103 2dys:N (2.2) BS09 DCW 7.1.1.9 GO:0004129 ... P00396 17332748
    80104 2dys:N (2.2) BS10 PEK 7.1.1.9 GO:0004129 ... P00396 17332748
    80105 2dys:O (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 17332748
    80106 2dys:O (2.2) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 17332748
    80107 2dys:O (2.2) BS03 PSC 7.1.1.9 GO:0004129 ... P68530 17332748
    80108 2dys:P (2.2) BS01 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80109 2dys:P (2.2) BS02 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80110 2dys:P (2.2) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 17332748
    80111 2dys:P (2.2) BS04 DCW 7.1.1.9 GO:0004129 ... P00415 17332748
    80112 2dys:P (2.2) BS05 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80113 2dys:P (2.2) BS06 PEK 7.1.1.9 GO:0004129 ... P00415 17332748
    80114 2dys:P (2.2) BS07 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80115 2dys:P (2.2) BS08 PGV 7.1.1.9 GO:0004129 ... P00415 17332748
    80116 2dys:P (2.2) BS09 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80117 2dys:P (2.2) BS10 CDL 7.1.1.9 GO:0004129 ... P00415 17332748
    80118 2dys:R (2.2) BS01 PSC 1.9.3.1 GO:0005743 ... P00426 17332748
    80119 2dys:S (2.2) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17332748
    80120 2dys:T (2.2) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17332748
    80121 2dys:T (2.2) BS02 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80122 2dys:T (2.2) BS03 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80123 2dys:T (2.2) BS04 PEK 1.9.3.1 GO:0005743 ... P07471 17332748
    80124 2dys:T (2.2) BS05 CDL 1.9.3.1 GO:0005743 ... P07471 17332748
    80125 2dys:Z (2.2) BS01 PGV 1.9.3.1 GO:0006123 ... P10175 17332748
    80126 2dys:Z (2.2) BS02 DMU 1.9.3.1 GO:0006123 ... P10175 17332748
    80127 2dyt:A (2.5) BS01 SO4 ? GO:0000045 ... P40344 17227760
    80128 2dyx:A (2.0) BS01 BGC 3.4.21.- GO:0005576 ... P24627 N/A
    80129 2dyx:A (2.0) BS02 GAL 3.4.21.- GO:0005576 ... P24627 N/A
    80130 2dyx:A (2.0) BS03 FE 3.4.21.- GO:0005576 ... P24627 N/A
    80131 2dyx:A (2.0) BS04 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    80132 2dz9:A (1.84) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    80133 2dz9:B (1.84) BS01 BT5 6.3.4.15 GO:0004077 ... O57883 N/A
    80134 2dza:B (1.9) BS01 PAB 2.5.1.15 GO:0004156 ... Q5SLV2 N/A
    80135 2dzb:A (1.9) BS01 HH2 2.5.1.15 GO:0004156 ... Q5SLV2 N/A
    80136 2dzb:B (1.9) BS01 HH2 2.5.1.15 GO:0004156 ... Q5SLV2 N/A
    80137 2dze:A (1.8) BS01 peptide ? GO:0005634 ... O74515 N/A
    80138 2dze:B (1.8) BS01 peptide ? GO:0005634 ... O74515 N/A
    80139 2e07:A (1.9) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    80140 2e08:A (2.0) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    80141 2e0a:A (1.86) BS01 MG 2.7.11.2 GO:0004672 ... Q16654 21904029
    80142 2e0a:A (1.86) BS02 ANP 2.7.11.2 GO:0004672 ... Q16654 21904029
    80143 2e0a:B (1.86) BS01 ANP 2.7.11.2 GO:0004672 ... Q16654 21904029
    80144 2e0i:A (2.8) BS01 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80145 2e0i:A (2.8) BS02 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80146 2e0i:B (2.8) BS01 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80147 2e0i:B (2.8) BS02 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80148 2e0i:C (2.8) BS01 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80149 2e0i:C (2.8) BS02 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80150 2e0i:D (2.8) BS01 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80151 2e0i:D (2.8) BS02 FAD 4.1.99.3 GO:0003677 ... F9VNB1 17107688
    80152 2e0n:A (2.0) BS01 SAH 2.1.1.130 GO:0008168 ... Q8KFD9 17229157
    80153 2e0n:B (2.0) BS01 SAH 2.1.1.130 GO:0008168 ... Q8KFD9 17229157
    80154 2e0p:A (1.6) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80155 2e0p:A (1.6) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80156 2e0p:A (1.6) BS03 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80157 2e0p:A (1.6) BS04 ZN 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80158 2e0p:A (1.6) BS05 CA 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80159 2e0s:A (2.15) BS01 RAM 3.4.21.- GO:0005576 ... P24627 N/A
    80160 2e0s:A (2.15) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    80161 2e0s:A (2.15) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    80162 2e0x:B (1.95) BS01 CA 2.3.2.2
    3.4.19.13
    N/A P18956 17135273
    80163 2e0x:D (1.95) BS01 CA 2.3.2.2
    3.4.19.13
    N/A P18956 17135273
    80164 2e15:A (1.8) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    80165 2e16:A (2.0) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    80166 2e17:A (1.9) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 18931409
    80167 2e18:A (2.1) BS01 ZN 6.3.1.5 GO:0003690 ... O57921 N/A
    80168 2e18:A (2.1) BS02 ZN 6.3.1.5 GO:0003690 ... O57921 N/A
    80169 2e18:B (2.1) BS01 ZN 6.3.1.5 GO:0003690 ... O57921 N/A
    80170 2e1a:A (2.5) BS01 MSE ? GO:0005515 ... O73983 17937921
    80171 2e1a:B (2.5) BS01 MSE ? GO:0005515 ... O73983 17937921
    80172 2e1a:C (2.5) BS01 MSE ? GO:0005515 ... O73983 17937921
    80173 2e1a:D (2.5) BS01 MSE ? GO:0005515 ... O73983 17937921
    80174 2e1c:A (2.1) BS01 dna ? GO:0005515 ... O59188 18073105
    80175 2e1c:A (2.1) BS02 dna ? GO:0005515 ... O59188 18073105
    80176 2e1d:A (2.0) BS01 SO3 2.2.1.2 GO:0004801 ... Q93092 N/A
    80177 2e1d:B (2.0) BS01 SO3 2.2.1.2 GO:0004801 ... Q93092 N/A
    80178 2e1m:A (2.8) BS01 FAD 1.4.3.11 GO:0016491 ... Q8L3C7 19531050
    80179 2e1m:B (2.8) BS01 FAD 1.4.3.11 GO:0016491 ... Q8L3C7 19531050
    80180 2e1m:C (2.8) BS01 FAD 1.4.3.11 GO:0016491 ... Q8L3C7 19531050
    80181 2e1p:A (2.3) BS01 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80182 2e1p:A (2.3) BS02 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80183 2e1p:A (2.3) BS03 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80184 2e1p:A (2.3) BS04 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80185 2e1p:A (2.3) BS05 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80186 2e1p:A (2.3) BS06 CA 3.4.21.- GO:0004252 ... P58502 17237225
    80187 2e1q:A (2.6) BS01 BCT 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80188 2e1q:A (2.6) BS02 CA 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80189 2e1q:A (2.6) BS03 CA 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80190 2e1q:A (2.6) BS04 FES 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80191 2e1q:A (2.6) BS05 FES 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80192 2e1q:A (2.6) BS06 FAD 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80193 2e1q:A (2.6) BS07 MOM 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80194 2e1q:B (2.6) BS01 BCT 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80195 2e1q:B (2.6) BS02 CA 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80196 2e1q:B (2.6) BS03 CA 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80197 2e1q:B (2.6) BS04 FES 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80198 2e1q:B (2.6) BS05 FES 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80199 2e1q:B (2.6) BS06 FAD 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077
    80200 2e1q:B (2.6) BS07 MOM 1.17.1.4
    1.17.3.2
    GO:0000255 ... P47989 17301077

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).