SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807801 8ftg:A (1.13) BS01 CFF N/A N/A N/A 37243579
    807802 8ftg:B (1.13) BS01 CFF N/A N/A N/A 37243579
    807803 8ftg:C (1.13) BS01 CFF N/A N/A N/A 37243579
    807804 8ftg:D (1.13) BS01 CFF N/A N/A N/A 37243579
    807805 8ftg:E (1.13) BS01 CFF N/A N/A N/A 37243579
    807806 8ftg:F (1.13) BS01 CFF N/A N/A N/A 37243579
    807807 8ftg:G (1.13) BS01 CFF N/A N/A N/A 37243579
    807808 8ftg:H (1.13) BS01 CFF N/A N/A N/A 37243579
    807809 8fth:A (3.17) BS01 ADP 3.6.4.12 GO:0004386 ... G0S163 37832548
    807810 8fti:A (3.5) BS01 rna ? N/A A0A660UUL5 37730702
    807811 8ftj:A (2.3) BS01 dna 3.2.2.-
    4.2.99.18
    GO:0003676 ... Q96FI4 37014002
    807812 8ftj:A (2.3) BS02 dna 3.2.2.-
    4.2.99.18
    GO:0003676 ... Q96FI4 37014002
    807813 8ftl:A (2.08) BS01 5ZF 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    807814 8ftl:B (2.08) BS01 5ZF 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    807815 8ftm:A (3.01) BS01 rna 3.6.4.12 GO:0004386 ... G0S163 37832548
    807816 8ftm:A (3.01) BS02 ADP 3.6.4.12 GO:0004386 ... G0S163 37832548
    807817 8ftm:B (3.01) BS01 rna 3.6.4.12 GO:0004386 ... G0S163 37832548
    807818 8fto:0 (1.85) BS01 rna ? N/A N/A 37419664
    807819 8fto:1 (1.85) BS01 rna ? N/A N/A 37419664
    807820 8fto:2 (1.85) BS01 rna ? N/A N/A 37419664
    807821 8fto:3 (1.85) BS01 rna ? N/A N/A 37419664
    807822 8fto:4 (1.85) BS01 rna ? N/A N/A 37419664
    807823 8fto:4 (1.85) BS02 rna ? N/A N/A 37419664
    807824 8fto:B (1.85) BS01 rna ? N/A N/A 37419664
    807825 8fto:C (1.85) BS01 rna ? N/A N/A 37419664
    807826 8fto:D (1.85) BS01 rna ? N/A N/A 37419664
    807827 8fto:E (1.85) BS01 rna ? N/A N/A 37419664
    807828 8fto:F (1.85) BS01 rna ? N/A N/A 37419664
    807829 8fto:G (1.85) BS01 rna ? N/A N/A 37419664
    807830 8fto:H (1.85) BS01 rna ? N/A N/A 37419664
    807831 8fto:I (1.85) BS01 rna ? N/A N/A 37419664
    807832 8fto:I (1.85) BS02 rna ? N/A N/A 37419664
    807833 8fto:J (1.85) BS01 rna ? N/A N/A 37419664
    807834 8fto:K (1.85) BS01 rna ? N/A N/A 37419664
    807835 8fto:L (1.85) BS01 rna ? N/A N/A 37419664
    807836 8fto:M (1.85) BS01 rna ? N/A N/A 37419664
    807837 8fto:M (1.85) BS02 rna ? N/A N/A 37419664
    807838 8fto:N (1.85) BS01 rna ? N/A N/A 37419664
    807839 8fto:O (1.85) BS01 rna ? N/A N/A 37419664
    807840 8fto:O (1.85) BS02 rna ? N/A N/A 37419664
    807841 8fto:P (1.85) BS01 rna ? N/A N/A 37419664
    807842 8fto:Q (1.85) BS01 rna ? N/A N/A 37419664
    807843 8fto:R (1.85) BS01 rna ? N/A N/A 37419664
    807844 8fto:S (1.85) BS01 rna ? N/A N/A 37419664
    807845 8fto:T (1.85) BS01 rna ? N/A N/A 37419664
    807846 8fto:U (1.85) BS01 rna ? N/A N/A 37419664
    807847 8fto:c (1.85) BS01 rna ? N/A N/A 37419664
    807848 8fto:c (1.85) BS02 rna ? N/A N/A 37419664
    807849 8fto:d (1.85) BS01 rna ? N/A N/A 37419664
    807850 8fto:e (1.85) BS01 rna ? N/A N/A 37419664
    807851 8fto:f (1.85) BS01 rna ? N/A N/A 37419664
    807852 8fto:f (1.85) BS02 rna ? N/A N/A 37419664
    807853 8fto:f (1.85) BS03 rna ? N/A N/A 37419664
    807854 8fto:g (1.85) BS01 rna ? N/A N/A 37419664
    807855 8fto:h (1.85) BS01 rna ? N/A N/A 37419664
    807856 8fto:i (1.85) BS01 rna ? N/A N/A 37419664
    807857 8fto:j (1.85) BS01 rna ? N/A N/A 37419664
    807858 8fto:j (1.85) BS02 rna ? N/A N/A 37419664
    807859 8fto:k (1.85) BS01 rna ? N/A N/A 37419664
    807860 8fto:l (1.85) BS01 rna ? N/A N/A 37419664
    807861 8fto:l (1.85) BS02 rna ? N/A N/A 37419664
    807862 8fto:m (1.85) BS01 rna ? N/A N/A 37419664
    807863 8fto:n (1.85) BS01 rna ? N/A N/A 37419664
    807864 8fto:n (1.85) BS02 rna ? N/A N/A 37419664
    807865 8fto:o (1.85) BS01 rna ? N/A N/A 37419664
    807866 8fto:o (1.85) BS02 rna ? N/A N/A 37419664
    807867 8fto:p (1.85) BS01 rna ? N/A N/A 37419664
    807868 8fto:q (1.85) BS01 rna ? N/A N/A 37419664
    807869 8fto:r (1.85) BS01 rna ? N/A N/A 37419664
    807870 8fto:s (1.85) BS01 rna ? N/A N/A 37419664
    807871 8fto:t (1.85) BS01 rna ? N/A N/A 37419664
    807872 8fto:u (1.85) BS01 rna ? N/A N/A 37419664
    807873 8fto:v (1.85) BS01 rna ? N/A N/A 37419664
    807874 8fto:v (1.85) BS02 rna ? N/A N/A 37419664
    807875 8fto:w (1.85) BS01 rna ? N/A N/A 37419664
    807876 8fto:x (1.85) BS01 rna ? N/A N/A 37419664
    807877 8fto:y (1.85) BS01 rna ? N/A N/A 37419664
    807878 8fto:y (1.85) BS02 rna ? N/A N/A 37419664
    807879 8fto:z (1.85) BS01 rna ? N/A N/A 37419664
    807880 8ftp:A (1.37) BS01 CA 3.1.1.1 GO:0016787 ... A0A0H2XJL0 37824340
    807881 8ftp:B (1.37) BS01 CA 3.1.1.1 GO:0016787 ... A0A0H2XJL0 37824340
    807882 8ftq:A (2.1) BS01 ZTO ? GO:0005634 ... Q16186 38509117
    807883 8ftq:B (2.1) BS01 ZTO ? GO:0005634 ... Q16186 38509117
    807884 8ftr:A (2.13) BS01 MTA ? GO:0008168 ... R9UTR3 37709735
    807885 8ftr:A (2.13) BS02 ZN ? GO:0008168 ... R9UTR3 37709735
    807886 8ftr:A (2.13) BS03 COI ? GO:0008168 ... R9UTR3 37709735
    807887 8fts:A (2.2) BS01 ZN ? GO:0008168 ... R9UTR3 37709735
    807888 8fts:A (2.2) BS02 SAH ? GO:0008168 ... R9UTR3 37709735
    807889 8fts:A (2.2) BS03 COI ? GO:0008168 ... R9UTR3 37709735
    807890 8ftt:A (2.08) BS01 SO4 N/A N/A N/A 37609231
    807891 8ftt:B (2.08) BS01 SO4 N/A N/A N/A 37609231
    807892 8ftv:A (2.04) BS01 SAH ? GO:0008168 ... R9UTR3 37709735
    807893 8ftv:A (2.04) BS02 ZN ? GO:0008168 ... R9UTR3 37709735
    807894 8ftv:A (2.04) BS03 Y9E ? GO:0008168 ... R9UTR3 37709735
    807895 8fty:A (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807896 8fty:B (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807897 8fty:C (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807898 8fty:D (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807899 8fty:E (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807900 8fty:F (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807901 8fty:G (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807902 8fty:H (1.95) BS01 FE2 ? GO:0003834 ... A0A7E5VY83 38355721
    807903 8fu2:A (1.9) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807904 8fu2:A (1.9) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807905 8fu2:A (1.9) BS03 PIT N/A GO:0010436 ... Q7S860 N/A
    807906 8fu2:B (1.9) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807907 8fu2:B (1.9) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807908 8fu2:B (1.9) BS03 PIT N/A GO:0010436 ... Q7S860 N/A
    807909 8fu2:C (1.9) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807910 8fu2:C (1.9) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807911 8fu2:C (1.9) BS03 PIT N/A GO:0010436 ... Q7S860 N/A
    807912 8fu2:D (1.9) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807913 8fu2:D (1.9) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807914 8fu2:D (1.9) BS03 PIT N/A GO:0010436 ... Q7S860 N/A
    807915 8fu2:D (1.9) BS04 PIT N/A GO:0010436 ... Q7S860 N/A
    807916 8fu3:A (2.88) BS01 YBK 2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... P28887 37865687
    807917 8fu4:A (1.6) BS01 peptide ? N/A Q53Z42 38377192
    807918 8fu5:A (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807919 8fu5:A (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807920 8fu5:B (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807921 8fu5:B (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807922 8fu5:C (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807923 8fu5:C (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807924 8fu5:D (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    807925 8fu5:D (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    807926 8fu6:R (2.9) BS01 peptide ? GO:0004888 ... P47871 37001505
    807927 8fua:A (1.9) BS01 peptide ? GO:0005737 ... P52293 37376602
    807928 8fua:A (1.9) BS02 peptide ? GO:0005737 ... P52293 37376602
    807929 8fub:A (2.75) BS01 peptide ? GO:0005737 ... O00629 37376602
    807930 8fuc:B (2.1) BS01 peptide ? GO:0005737 ... P52293 37376602
    807931 8fuc:B (2.1) BS02 peptide ? GO:0005737 ... P52293 37376602
    807932 8fud:A (1.68) BS01 peptide N/A GO:0005515 ... Q9QZ88 N/A
    807933 8fud:B (1.68) BS01 peptide N/A GO:0005515 ... Q9QZ88 N/A
    807934 8fuf:A (3.69) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807935 8fuf:A (3.69) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807936 8fuf:C (3.69) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807937 8fuf:C (3.69) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807938 8fuf:E (3.69) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807939 8fuf:E (3.69) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807940 8fuf:G (3.69) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807941 8fuf:G (3.69) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807942 8fug:A (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807943 8fug:B (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807944 8fug:C (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807945 8fug:D (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807946 8fug:E (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807947 8fug:F (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807948 8fug:G (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807949 8fug:H (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807950 8fug:I (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807951 8fug:J (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807952 8fug:K (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807953 8fug:L (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807954 8fug:M (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807955 8fug:N (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807956 8fug:O (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807957 8fug:P (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807958 8fug:Q (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807959 8fug:R (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807960 8fug:S (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807961 8fug:T (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807962 8fug:U (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807963 8fug:V (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807964 8fug:W (2.7) BS01 Y9H ? GO:0008017 ... P10636 37236970
    807965 8fui:A (1.25) BS01 Y9R 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 37150084
    807966 8fui:B (1.25) BS01 Y9R 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 37150084
    807967 8fuj:A (1.12) BS01 Y9N 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 37150084
    807968 8fuj:B (1.12) BS01 Y9N 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 37150084
    807969 8fuk:A (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807970 8fuk:B (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807971 8fuk:C (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807972 8fuk:D (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807973 8fuk:E (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807974 8fuk:F (3.36) BS01 rna ? N/A A0A6I8WFX5 N/A
    807975 8fuk:G (3.36) BS01 rna ? N/A A0A6I8WFX4 N/A
    807976 8fuk:H (3.36) BS01 rna ? GO:0004519 ... A0A6I8WFX3 N/A
    807977 8fuk:J (3.36) BS01 rna ? N/A A0A6I8WFP2 N/A
    807978 8ful:A (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807979 8ful:B (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807980 8ful:B (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807981 8ful:C (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807982 8ful:D (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807983 8ful:D (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807984 8ful:E (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807985 8ful:F (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807986 8ful:F (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807987 8ful:G (2.29) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807988 8ful:H (2.29) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807989 8ful:H (2.29) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807990 8fum:A (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807991 8fum:B (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807992 8fum:B (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807993 8fum:C (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807994 8fum:D (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807995 8fum:D (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807996 8fum:E (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    807997 8fum:F (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807998 8fum:F (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    807999 8fum:G (1.48) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    808000 8fum:H (1.48) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).