SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    808201 8fhw:B (3.2) BS02 G6P ? GO:0003824 ... J9VJZ1 36993618
    808202 8fhw:C (3.2) BS01 UDP ? GO:0003824 ... J9VJZ1 36993618
    808203 8fhw:C (3.2) BS02 G6P ? GO:0003824 ... J9VJZ1 36993618
    808204 8fhw:D (3.2) BS01 UDP ? GO:0003824 ... J9VJZ1 36993618
    808205 8fhw:D (3.2) BS02 G6P ? GO:0003824 ... J9VJZ1 36993618
    808206 8fi3:A (2.9) BS01 BTN 6.3.4.15 GO:0003677 ... A0A0W7ZMT5 N/A
    808207 8fi3:B (2.9) BS01 BTN 6.3.4.15 GO:0003677 ... A0A0W7ZMT5 N/A
    808208 8fi4:A (1.8) BS01 MYA 2.3.1.97 GO:0004379 ... Q4Q5S8 N/A
    808209 8fi5:A (2.25) BS01 MYA 2.3.1.97 GO:0004379 ... Q4Q5S8 N/A
    808210 8fi6:A (1.8) BS01 MYA 2.3.1.97 GO:0004379 ... Q4Q5S8 N/A
    808211 8fia:A (2.4) BS01 FUC ? N/A O61307 37165720
    808212 8fib:A (1.68) BS01 HEM ? GO:0004497 ... A0A0M2KDV0 37339230
    808213 8fic:A (1.7) BS01 HEM ? GO:0004497 ... A0A0M2KDV0 37339230
    808214 8fic:A (1.7) BS02 NE4 ? GO:0004497 ... A0A0M2KDV0 37339230
    808215 8fid:A (1.83) BS01 HEM ? GO:0004497 ... A0A0M2KDV0 37339230
    808216 8fid:A (1.83) BS02 NE4 ? GO:0004497 ... A0A0M2KDV0 37339230
    808217 8fie:A (2.26) BS01 HEM ? GO:0004497 ... A0A0M2KDV0 37339230
    808218 8fif:A (2.35) BS01 peptide N/A N/A N/A N/A
    808219 8fif:B (2.35) BS01 peptide N/A N/A N/A N/A
    808220 8fif:C (2.35) BS01 peptide N/A N/A N/A N/A
    808221 8fig:A (1.75) BS01 UED 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37957287
    808222 8fii:A (2.94) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808223 8fii:A (2.94) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808224 8fii:B (2.94) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808225 8fii:B (2.94) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808226 8fij:A (2.799) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808227 8fij:A (2.799) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808228 8fij:B (2.799) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808229 8fij:B (2.799) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808230 8fik:A (1.912) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808231 8fik:A (1.912) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808232 8fik:A (1.912) BS03 IHP 3.5.4.38 GO:0000932 ... P31941 37821454
    808233 8fik:B (1.912) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808234 8fik:B (1.912) BS02 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808235 8fil:A (2.01) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808236 8fil:A (2.01) BS02 IHP 3.5.4.38 GO:0000932 ... P31941 37821454
    808237 8fil:B (2.01) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808238 8fil:B (2.01) BS02 IHP 3.5.4.38 GO:0000932 ... P31941 37821454
    808239 8fim:A (2.22) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808240 8fim:A (2.22) BS02 IHP 3.5.4.38 GO:0000932 ... P31941 37821454
    808241 8fim:A (2.22) BS03 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808242 8fim:B (2.22) BS01 dna 3.5.4.38 GO:0000932 ... P31941 37821454
    808243 8fim:B (2.22) BS02 IHP 3.5.4.38 GO:0000932 ... P31941 37821454
    808244 8fim:B (2.22) BS03 ZN 3.5.4.38 GO:0000932 ... P31941 37821454
    808245 8fio:A (1.97) BS01 NAR ? GO:0016616 ... A0A1B6PND3 37762209
    808246 8fio:A (1.97) BS02 NAP ? GO:0016616 ... A0A1B6PND3 37762209
    808247 8fio:B (1.97) BS01 NAR ? GO:0016616 ... A0A1B6PND3 37762209
    808248 8fio:B (1.97) BS02 NAP ? GO:0016616 ... A0A1B6PND3 37762209
    808249 8fip:A (1.7) BS01 NAP ? GO:0016616 ... A0A1B6PND3 37762209
    808250 8fip:B (1.7) BS01 NAP ? GO:0016616 ... A0A1B6PND3 37762209
    808251 8fiq:A (2.66) BS01 peptide N/A N/A N/A 37590357
    808252 8fit:A (2.75) BS01 peptide N/A N/A N/A 37590357
    808253 8fit:C (2.75) BS01 peptide N/A N/A N/A 37590357
    808254 8fiu:A (1.56) BS01 Y05 ? GO:0016032 ... P12493 36719971
    808255 8fiu:A (1.56) BS02 Y05 ? GO:0016032 ... P12493 36719971
    808256 8fiu:B (1.56) BS01 Y05 ? GO:0016032 ... P12493 36719971
    808257 8fiu:C (1.56) BS01 Y05 ? GO:0016032 ... P12493 36719971
    808258 8fiv:A (2.51) BS01 Y0I 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37482021
    808259 8fiw:A (2.54) BS01 Y0E 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37482021
    808260 8fiw:B (2.54) BS01 Y0E 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37482021
    808261 8fiw:B (2.54) BS02 Y1E 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37482021
    808262 8fix:C (3.9) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808263 8fix:C (3.9) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808264 8fix:C (3.9) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808265 8fix:D (3.9) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808266 8fix:D (3.9) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808267 8fix:D (3.9) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808268 8fix:D (3.9) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808269 8fix:D (3.9) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808270 8fiy:C (7.3) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808271 8fiy:C (7.3) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808272 8fiy:C (7.3) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36931247
    808273 8fiy:D (7.3) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808274 8fiy:D (7.3) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808275 8fiy:D (7.3) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808276 8fiy:D (7.3) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808277 8fiy:D (7.3) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 36931247
    808278 8fiz:AB (3.8) BS01 rna ? GO:0000028 ... P0A7U7 36931247
    808279 8fiz:AC (3.8) BS01 rna ? GO:0000049 ... P0A7S3 36931247
    808280 8fiz:AD (3.8) BS01 rna ? GO:0002181 ... P0A7U3 36931247
    808281 8fiz:AE (3.8) BS01 rna ? GO:0000049 ... P0A7S9 36931247
    808282 8fiz:AF (3.8) BS01 rna ? GO:0000028 ... P0AG59 36931247
    808283 8fiz:AG (3.8) BS01 rna ? GO:0000028 ... P0A7V3 36931247
    808284 8fiz:AG (3.8) BS02 rna ? GO:0000028 ... P0A7V3 36931247
    808285 8fiz:AH (3.8) BS01 rna ? GO:0000049 ... P0A7R5 36931247
    808286 8fiz:AI (3.8) BS01 rna ? GO:0000028 ... P0A7V8 36931247
    808287 8fiz:AJ (3.8) BS01 rna ? GO:0000028 ... P0A7V0 36931247
    808288 8fiz:AK (3.8) BS01 rna ? GO:0002181 ... P0A7X3 36931247
    808289 8fiz:AK (3.8) BS02 rna ? GO:0002181 ... P0A7X3 36931247
    808290 8fiz:AL (3.8) BS01 rna ? GO:0000028 ... P02359 36931247
    808291 8fiz:AM (3.8) BS01 rna ? GO:0002181 ... P0A7R9 36931247
    808292 8fiz:AN (3.8) BS01 rna ? GO:0002181 ... P02358 36931247
    808293 8fiz:AO (3.8) BS01 rna ? GO:0000028 ... P0A7T3 36931247
    808294 8fiz:AP (3.8) BS01 rna ? GO:0000028 ... P0A7W1 36931247
    808295 8fiz:AP (3.8) BS02 rna ? GO:0000028 ... P0A7W1 36931247
    808296 8fiz:AQ (3.8) BS01 rna ? GO:0000028 ... P0A7W7 36931247
    808297 8fiz:AR (3.8) BS01 rna ? GO:0000028 ... P0ADZ4 36931247
    808298 8fiz:AR (3.8) BS02 rna ? GO:0000028 ... P0ADZ4 36931247
    808299 8fiz:AS (3.8) BS01 rna ? GO:0000028 ... P0AG63 36931247
    808300 8fiz:AT (3.8) BS01 rna ? GO:0002181 ... P0A7T7 36931247
    808301 8fiz:AU (3.8) BS01 rna ? GO:0000028 ... P68679 36931247
    808302 8fiz:AV (3.8) BS01 rna ? GO:0002181 ... P0A7M9 36931247
    808303 8fiz:BD (3.8) BS01 rna ? GO:0000027 ... P60422 36931247
    808304 8fiz:BE (3.8) BS01 rna ? GO:0000027 ... P60438 36931247
    808305 8fiz:BF (3.8) BS01 rna ? GO:0001070 ... P60723 36931247
    808306 8fiz:BG (3.8) BS01 rna ? GO:0000027 ... P62399 36931247
    808307 8fiz:BG (3.8) BS02 rna ? GO:0000027 ... P62399 36931247
    808308 8fiz:BG (3.8) BS03 rna ? GO:0000027 ... P62399 36931247
    808309 8fiz:BH (3.8) BS01 rna ? GO:0002181 ... P0C018 36931247
    808310 8fiz:BH (3.8) BS02 rna ? GO:0002181 ... P0C018 36931247
    808311 8fiz:BI (3.8) BS01 rna ? GO:0000027 ... P0A7N9 36931247
    808312 8fiz:BJ (3.8) BS01 rna ? GO:0000027 ... P0AG55 36931247
    808313 8fiz:BK (3.8) BS01 rna ? GO:0002181 ... P0A7R1 36931247
    808314 8fiz:BL (3.8) BS01 rna ? GO:0000027 ... P0A7J7 36931247
    808315 8fiz:BM (3.8) BS01 rna ? GO:0000027 ... P0A7N4 36931247
    808316 8fiz:BN (3.8) BS01 rna ? GO:0002181 ... P0A7P5 36931247
    808317 8fiz:BO (3.8) BS01 rna ? GO:0002181 ... P0A7Q1 36931247
    808318 8fiz:BP (3.8) BS01 rna ? GO:0002181 ... P0A7Q6 36931247
    808319 8fiz:BQ (3.8) BS01 rna ? GO:0000027 ... P0AG51 36931247
    808320 8fiz:BR (3.8) BS01 rna ? GO:0002181 ... P0AA10 36931247
    808321 8fiz:BS (3.8) BS01 rna ? GO:0002181 ... P0ADY3 36931247
    808322 8fiz:BS (3.8) BS02 rna ? GO:0002181 ... P0ADY3 36931247
    808323 8fiz:BT (3.8) BS01 rna ? GO:0002181 ... P02413 36931247
    808324 8fiz:BU (3.8) BS01 rna ? GO:0000027 ... P0ADY7 36931247
    808325 8fiz:BV (3.8) BS01 rna ? GO:0000027 ... P0AG44 36931247
    808326 8fiz:BW (3.8) BS01 rna ? GO:0000027 ... P0A7K6 36931247
    808327 8fiz:BW (3.8) BS02 rna ? GO:0000027 ... P0A7K6 36931247
    808328 8fiz:BX (3.8) BS01 rna ? GO:0000027 ... P0A7L3 36931247
    808329 8fiz:BY (3.8) BS01 rna ? GO:0002181 ... P0AG48 36931247
    808330 8fiz:BZ (3.8) BS01 rna ? GO:0002181 ... P61175 36931247
    808331 8fiz:DA (3.8) BS01 rna ? GO:0000027 ... P0ADZ0 36931247
    808332 8fiz:DB (3.8) BS01 rna ? GO:0000027 ... P60624 36931247
    808333 8fiz:DC (3.8) BS01 rna ? GO:0000027 ... P68919 36931247
    808334 8fiz:DD (3.8) BS01 rna ? GO:0000027 ... P0A7L8 36931247
    808335 8fiz:DD (3.8) BS02 rna ? GO:0000027 ... P0A7L8 36931247
    808336 8fiz:DE (3.8) BS01 rna ? GO:0000027 ... P0A7M2 36931247
    808337 8fiz:DF (3.8) BS01 rna ? GO:0000027 ... P0A7M6 36931247
    808338 8fiz:DG (3.8) BS01 rna ? GO:0002181 ... P0A7J3 36931247
    808339 8fj4:A (2.76) BS01 XZU N/A GO:0000122 ... O60341 40175327
    808340 8fj4:A (2.76) BS02 XZU N/A GO:0000122 ... O60341 40175327
    808341 8fj4:A (2.76) BS03 XZU N/A GO:0000122 ... O60341 40175327
    808342 8fj4:A (2.76) BS04 XZQ N/A GO:0000122 ... O60341 40175327
    808343 8fj6:A () BS01 Y0Z N/A N/A N/A N/A
    808344 8fj7:A (2.8) BS01 peptide N/A GO:0000122 ... O60341 40175327
    808345 8fj7:A (2.8) BS02 Y0Z N/A GO:0000122 ... O60341 40175327
    808346 8fj8:A (2.17) BS01 CA ? GO:0001726 ... P02638 N/A
    808347 8fj8:A (2.17) BS02 CA ? GO:0001726 ... P02638 N/A
    808348 8fj9:A (2.5) BS01 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808349 8fj9:B (2.5) BS01 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808350 8fja:A (3.0) BS01 peptide ? N/A Q861F7 40138458
    808351 8fja:D (3.0) BS01 peptide N/A N/A N/A 40138458
    808352 8fja:E (3.0) BS01 peptide N/A N/A N/A 40138458
    808353 8fjb:A (3.06) BS01 peptide ? N/A Q861F7 40138458
    808354 8fjb:E (3.06) BS01 peptide N/A N/A N/A 40138458
    808355 8fjc:A (2.5) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808356 8fjc:A (2.5) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808357 8fjc:A (2.5) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808358 8fjc:B (2.5) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808359 8fjc:B (2.5) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808360 8fjc:B (2.5) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808361 8fjd:A (4.46) BS01 CA ? GO:0005829 ... A0A3B6QC98 36731794
    808362 8fjd:B (4.46) BS01 CA ? GO:0005829 ... A0A3B6QC98 36731794
    808363 8fjh:B (1.54) BS01 GDP 3.6.5.2 GO:0003924 ... P11233 37269475
    808364 8fjh:B (1.54) BS02 Y0P 3.6.5.2 GO:0003924 ... P11233 37269475
    808365 8fjh:B (1.54) BS03 CA 3.6.5.2 GO:0003924 ... P11233 37269475
    808366 8fji:B (1.48) BS01 GDP 3.6.5.2 GO:0003924 ... P11233 37269475
    808367 8fji:B (1.48) BS02 Y0M 3.6.5.2 GO:0003924 ... P11233 37269475
    808368 8fji:B (1.48) BS03 CA 3.6.5.2 GO:0003924 ... P11233 37269475
    808369 8fjk:E (3.3) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808370 8fjk:G (3.3) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808371 8fjk:I (3.3) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808372 8fjk:K (3.3) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808373 8fjl:D (3.27) BS01 rna 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808374 8fjl:E (3.27) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808375 8fjl:G (3.27) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808376 8fjl:I (3.27) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808377 8fjl:K (3.27) BS01 ZN 3.6.4.13 GO:0000166 ... Q8JU60 36856784
    808378 8fjm:A (1.9) BS01 SAH 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808379 8fjm:A (1.9) BS02 ZN 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808380 8fjm:A (1.9) BS03 CA 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808381 8fjm:B (1.9) BS01 SAH 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808382 8fjm:B (1.9) BS02 ZN 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808383 8fjm:B (1.9) BS03 CA 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808384 8fjn:A (2.1) BS01 SAH 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808385 8fjn:A (2.1) BS02 ZN 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808386 8fjn:A (2.1) BS03 CA 2.1.1.360 GO:0031151 ... Q581Z0 38503750
    808387 8fjo:A (1.69) BS01 HEM ? GO:0004497 ... B2HHT9 36842492
    808388 8fjo:A (1.69) BS02 Y7R ? GO:0004497 ... B2HHT9 36842492
    808389 8fjo:A (1.69) BS03 SO4 ? GO:0004497 ... B2HHT9 36842492
    808390 8fjo:A (1.69) BS04 SO4 ? GO:0004497 ... B2HHT9 36842492
    808391 8fjq:A (1.62) BS01 HEM ? GO:0004601 ... D1A807 N/A
    808392 8fjq:B (1.62) BS01 HEM ? GO:0004601 ... D1A807 N/A
    808393 8fjr:A (1.49) BS01 HEM ? GO:0004601 ... D1A807 N/A
    808394 8fjr:B (1.49) BS01 HEM ? GO:0004601 ... D1A807 N/A
    808395 8fjt:A (2.47) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 37582241
    808396 8fjt:A (2.47) BS02 Y72 2.1.2.1 GO:0002082 ... P34897 37582241
    808397 8fjt:A (2.47) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 37582241
    808398 8fjt:A (2.47) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 37582241
    808399 8fjt:A (2.47) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 37582241
    808400 8fjt:B (2.47) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 37582241

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).