SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    808401 8fjt:B (2.47) BS02 Y72 2.1.2.1 GO:0002082 ... P34897 37582241
    808402 8fjt:B (2.47) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 37582241
    808403 8fjt:B (2.47) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 37582241
    808404 8fjt:B (2.47) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 37582241
    808405 8fju:A (2.51) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 37582241
    808406 8fju:A (2.51) BS02 Y79 2.1.2.1 GO:0002082 ... P34897 37582241
    808407 8fju:A (2.51) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 37582241
    808408 8fju:A (2.51) BS04 Y79 2.1.2.1 GO:0002082 ... P34897 37582241
    808409 8fju:B (2.51) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 37582241
    808410 8fju:B (2.51) BS02 Y79 2.1.2.1 GO:0002082 ... P34897 37582241
    808411 8fju:B (2.51) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 37582241
    808412 8fju:B (2.51) BS04 Y79 2.1.2.1 GO:0002082 ... P34897 37582241
    808413 8fjv:A (2.69) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808414 8fjv:A (2.69) BS02 Y72 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808415 8fjw:A (2.08) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808416 8fjw:A (2.08) BS02 Y79 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808417 8fjx:A (2.17) BS01 Y7L 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808418 8fjx:A (2.17) BS02 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808419 8fjy:A (2.98) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808420 8fjy:A (2.98) BS02 Y6U 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37582241
    808421 8fjz:A (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808422 8fjz:B (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808423 8fjz:C (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808424 8fjz:D (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808425 8fjz:E (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808426 8fjz:F (1.897) BS01 Y3I 2.7.11.1 GO:0004672 ... Q92918 36940470
    808427 8fk3:A (2.6) BS01 peptide ? GO:0005737 ... P52293 36851528
    808428 8fk4:A (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808429 8fk4:A (3.25) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808430 8fk4:A (3.25) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808431 8fk4:B (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808432 8fk4:B (3.25) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808433 8fk4:B (3.25) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808434 8fk4:C (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808435 8fk4:C (3.25) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808436 8fk4:C (3.25) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808437 8fk4:D (3.25) BS01 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808438 8fk4:D (3.25) BS02 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808439 8fk4:E (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808440 8fk4:E (3.25) BS02 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808441 8fk4:E (3.25) BS03 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808442 8fk4:E (3.25) BS04 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808443 8fk4:F (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808444 8fk4:F (3.25) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808445 8fk4:F (3.25) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808446 8fk4:G (3.25) BS01 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808447 8fk4:G (3.25) BS02 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808448 8fk4:H (3.25) BS01 GLC 2.4.1.5 GO:0009250 ... P08987 37158310
    808449 8fk4:H (3.25) BS02 AC1 2.4.1.5 GO:0009250 ... P08987 37158310
    808450 8fk4:H (3.25) BS03 CA 2.4.1.5 GO:0009250 ... P08987 37158310
    808451 8fk5:L (3.4) BS01 MAN ? GO:0005576 ... Q6PJG0 37436900
    808452 8fkb:A (1.42) BS01 FOF ? GO:0004497 ... B2HHT9 36842492
    808453 8fkb:A (1.42) BS02 HEM ? GO:0004497 ... B2HHT9 36842492
    808454 8fkb:A (1.42) BS03 SO4 ? GO:0004497 ... B2HHT9 36842492
    808455 8fkb:A (1.42) BS04 SO4 ? GO:0004497 ... B2HHT9 36842492
    808456 8fkb:A (1.42) BS05 SO4 ? GO:0004497 ... B2HHT9 36842492
    808457 8fkc:A (1.42) BS01 peptide ? GO:0003677 ... P37231 40021712
    808458 8fkc:A (1.42) BS02 Y5F ? GO:0003677 ... P37231 40021712
    808459 8fkd:A (2.22) BS01 peptide ? GO:0003677 ... P37231 40021712
    808460 8fkd:A (2.22) BS02 Y5O ? GO:0003677 ... P37231 40021712
    808461 8fke:A (2.02) BS01 peptide ? GO:0003677 ... P37231 40021712
    808462 8fke:A (2.02) BS02 Y5T ? GO:0003677 ... P37231 40021712
    808463 8fkf:A (1.82) BS01 peptide ? GO:0003677 ... P37231 40021712
    808464 8fkf:A (1.82) BS02 Y5X ? GO:0003677 ... P37231 40021712
    808465 8fkg:A (2.12) BS01 peptide ? GO:0003677 ... P37231 40021712
    808466 8fkg:A (2.12) BS02 Y62 ? GO:0003677 ... P37231 40021712
    808467 8fko:A (2.104) BS01 Y3O 2.7.11.1 GO:0004672 ... Q92918 36940470
    808468 8fko:B (2.104) BS01 Y3O 2.7.11.1 GO:0004672 ... Q92918 36940470
    808469 8fko:C (2.104) BS01 Y3O 2.7.11.1 GO:0004672 ... Q92918 36940470
    808470 8fko:D (2.104) BS01 Y3O 2.7.11.1 GO:0004672 ... Q92918 36940470
    808471 8fko:E (2.104) BS01 Y3O 2.7.11.1 GO:0004672 ... Q92918 36940470
    808472 8fkp:L6 (2.85) BS01 rna ? GO:0002181 ... P26373 37410842
    808473 8fkp:L6 (2.85) BS02 rna ? GO:0002181 ... P26373 37410842
    808474 8fkp:L7 (2.85) BS01 rna ? GO:0002181 ... P40429 37410842
    808475 8fkp:L8 (2.85) BS01 rna ? GO:0002181 ... P50914 37410842
    808476 8fkp:L9 (2.85) BS01 rna ? GO:0002181 ... P61313 37410842
    808477 8fkp:L9 (2.85) BS02 rna ? GO:0002181 ... P61313 37410842
    808478 8fkp:L9 (2.85) BS03 MG ? GO:0002181 ... P61313 37410842
    808479 8fkp:LA (2.85) BS01 rna ? GO:0002181 ... P18621 37410842
    808480 8fkp:LA (2.85) BS02 rna ? GO:0002181 ... P18621 37410842
    808481 8fkp:LB (2.85) BS01 rna ? GO:0002181 ... Q07020 37410842
    808482 8fkp:LC (2.85) BS01 rna ? GO:0002181 ... Q02543 37410842
    808483 8fkp:LE (2.85) BS01 rna ? GO:0001650 ... P46778 37410842
    808484 8fkp:LI (2.85) BS01 rna ? GO:0002181 ... P61254 37410842
    808485 8fkp:LI (2.85) BS02 rna ? GO:0002181 ... P61254 37410842
    808486 8fkp:LK (2.85) BS01 rna ? GO:0002181 ... P46776 37410842
    808487 8fkp:LN (2.85) BS01 rna ? GO:0002181 ... P39023 37410842
    808488 8fkp:LQ (2.85) BS01 rna ? GO:0002181 ... P62910 37410842
    808489 8fkp:LQ (2.85) BS02 MG ? GO:0002181 ... P62910 37410842
    808490 8fkp:LS (2.85) BS01 rna ? GO:0000463 ... P42766 37410842
    808491 8fkp:LS (2.85) BS02 rna ? GO:0000463 ... P42766 37410842
    808492 8fkp:LT (2.85) BS01 rna ? GO:0002181 ... P18077 37410842
    808493 8fkp:LT (2.85) BS02 MG ? GO:0002181 ... P18077 37410842
    808494 8fkp:LU (2.85) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    808495 8fkp:LW (2.85) BS01 rna ? GO:0000448 ... P61927 37410842
    808496 8fkp:LW (2.85) BS02 rna ? GO:0000448 ... P61927 37410842
    808497 8fkp:LW (2.85) BS03 ZN ? GO:0000448 ... P61927 37410842
    808498 8fkp:NB (2.85) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    808499 8fkp:NE (2.85) BS01 rna ? GO:0001652 ... O75683 37410842
    808500 8fkp:NG (2.85) BS01 rna ? GO:0000460 ... Q9Y3B9 37410842
    808501 8fkp:NM (2.85) BS01 rna ? GO:0000460 ... Q9BXY0 37410842
    808502 8fkp:NM (2.85) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    808503 8fkp:NN (2.85) BS01 rna ? GO:0000463 ... Q9NQ55 37410842
    808504 8fkp:NO (2.85) BS01 rna ? GO:0003713 ... P56182 37410842
    808505 8fkp:NQ (2.85) BS01 rna ? GO:0000176 ... Q6RFH5 37410842
    808506 8fkp:NS (2.85) BS01 rna ? GO:0000460 ... Q9H9Y2 37410842
    808507 8fkp:NS (2.85) BS02 rna ? GO:0000460 ... Q9H9Y2 37410842
    808508 8fkp:SA (2.85) BS01 rna ? GO:0002181 ... P36578 37410842
    808509 8fkp:SA (2.85) BS02 rna ? GO:0002181 ... P36578 37410842
    808510 8fkp:SC (2.85) BS01 rna ? GO:0002181 ... Q02878 37410842
    808511 8fkp:SD (2.85) BS01 rna ? GO:0000463 ... P18124 37410842
    808512 8fkp:SE (2.85) BS01 rna ? GO:0000470 ... P62424 37410842
    808513 8fkp:SE (2.85) BS02 rna ? GO:0000470 ... P62424 37410842
    808514 8fkp:SH (2.85) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    808515 8fkp:SH (2.85) BS02 peptide ? GO:0000794 ... Q9BYG3 37410842
    808516 8fkp:SI (2.85) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    808517 8fkp:SJ (2.85) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    808518 8fkp:SK (2.85) BS01 rna ? GO:0000054 ... P56537 37410842
    808519 8fkp:SL (2.85) BS01 rna ? GO:0001649 ... O76021 37410842
    808520 8fkp:SM (2.85) BS01 rna ? GO:0000463 ... O00541 37410842
    808521 8fkp:SM (2.85) BS02 rna ? GO:0000463 ... O00541 37410842
    808522 8fkp:SN (2.85) BS01 rna ? GO:0003723 ... Q99848 37410842
    808523 8fkp:SO (2.85) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    808524 8fkp:SS (2.85) BS01 rna ? GO:0000027 ... Q14137 37410842
    808525 8fkp:SV (2.85) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    808526 8fkp:SV (2.85) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    808527 8fkp:SW (2.85) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    808528 8fkp:SZ (2.85) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    808529 8fkp:SZ (2.85) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    808530 8fkq:L6 (2.76) BS01 rna ? GO:0002181 ... P26373 37410842
    808531 8fkq:L6 (2.76) BS02 rna ? GO:0002181 ... P26373 37410842
    808532 8fkq:L7 (2.76) BS01 rna ? GO:0002181 ... P40429 37410842
    808533 8fkq:L8 (2.76) BS01 rna ? GO:0002181 ... P50914 37410842
    808534 8fkq:L9 (2.76) BS01 rna ? GO:0002181 ... P61313 37410842
    808535 8fkq:L9 (2.76) BS02 rna ? GO:0002181 ... P61313 37410842
    808536 8fkq:L9 (2.76) BS03 MG ? GO:0002181 ... P61313 37410842
    808537 8fkq:LA (2.76) BS01 rna ? GO:0002181 ... P18621 37410842
    808538 8fkq:LA (2.76) BS02 rna ? GO:0002181 ... P18621 37410842
    808539 8fkq:LB (2.76) BS01 rna ? GO:0002181 ... Q07020 37410842
    808540 8fkq:LC (2.76) BS01 rna ? GO:0002181 ... Q02543 37410842
    808541 8fkq:LE (2.76) BS01 rna ? GO:0001650 ... P46778 37410842
    808542 8fkq:LI (2.76) BS01 rna ? GO:0002181 ... P61254 37410842
    808543 8fkq:LI (2.76) BS02 rna ? GO:0002181 ... P61254 37410842
    808544 8fkq:LK (2.76) BS01 rna ? GO:0002181 ... P46776 37410842
    808545 8fkq:LL (2.76) BS01 rna ? GO:0002181 ... P46779 37410842
    808546 8fkq:LN (2.76) BS01 rna ? GO:0002181 ... P39023 37410842
    808547 8fkq:LQ (2.76) BS01 rna ? GO:0002181 ... P62910 37410842
    808548 8fkq:LQ (2.76) BS02 MG ? GO:0002181 ... P62910 37410842
    808549 8fkq:LS (2.76) BS01 rna ? GO:0000463 ... P42766 37410842
    808550 8fkq:LS (2.76) BS02 rna ? GO:0000463 ... P42766 37410842
    808551 8fkq:LT (2.76) BS01 rna ? GO:0002181 ... P18077 37410842
    808552 8fkq:LT (2.76) BS02 MG ? GO:0002181 ... P18077 37410842
    808553 8fkq:LU (2.76) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    808554 8fkq:LW (2.76) BS01 rna ? GO:0000448 ... P61927 37410842
    808555 8fkq:LW (2.76) BS02 rna ? GO:0000448 ... P61927 37410842
    808556 8fkq:LW (2.76) BS03 ZN ? GO:0000448 ... P61927 37410842
    808557 8fkq:NE (2.76) BS01 rna ? GO:0001652 ... O75683 37410842
    808558 8fkq:NG (2.76) BS01 rna ? GO:0000460 ... Q9Y3B9 37410842
    808559 8fkq:NN (2.76) BS01 rna ? GO:0000463 ... Q9NQ55 37410842
    808560 8fkq:SA (2.76) BS01 rna ? GO:0002181 ... P36578 37410842
    808561 8fkq:SA (2.76) BS02 rna ? GO:0002181 ... P36578 37410842
    808562 8fkq:SC (2.76) BS01 rna ? GO:0002181 ... Q02878 37410842
    808563 8fkq:SD (2.76) BS01 rna ? GO:0000463 ... P18124 37410842
    808564 8fkq:SE (2.76) BS01 rna ? GO:0000470 ... P62424 37410842
    808565 8fkq:SE (2.76) BS02 rna ? GO:0000470 ... P62424 37410842
    808566 8fkq:SE (2.76) BS03 rna ? GO:0000470 ... P62424 37410842
    808567 8fkq:SH (2.76) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    808568 8fkq:SH (2.76) BS02 peptide ? GO:0000794 ... Q9BYG3 37410842
    808569 8fkq:SI (2.76) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    808570 8fkq:SI (2.76) BS02 peptide ? GO:0000463 ... Q6DKI1 37410842
    808571 8fkq:SJ (2.76) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    808572 8fkq:SK (2.76) BS01 rna ? GO:0000054 ... P56537 37410842
    808573 8fkq:SL (2.76) BS01 rna ? GO:0001649 ... O76021 37410842
    808574 8fkq:SM (2.76) BS01 rna ? GO:0000463 ... O00541 37410842
    808575 8fkq:SM (2.76) BS02 rna ? GO:0000463 ... O00541 37410842
    808576 8fkq:SN (2.76) BS01 rna ? GO:0003723 ... Q99848 37410842
    808577 8fkq:SO (2.76) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    808578 8fkq:SS (2.76) BS01 rna ? GO:0000027 ... Q14137 37410842
    808579 8fkq:SV (2.76) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    808580 8fkq:SV (2.76) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    808581 8fkq:SW (2.76) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    808582 8fkq:SZ (2.76) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    808583 8fkq:SZ (2.76) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    808584 8fkr:BA (2.89) BS01 rna ? GO:0002181 ... P30050 37410842
    808585 8fkr:L6 (2.89) BS01 rna ? GO:0002181 ... P26373 37410842
    808586 8fkr:L6 (2.89) BS02 rna ? GO:0002181 ... P26373 37410842
    808587 8fkr:L7 (2.89) BS01 rna ? GO:0002181 ... P40429 37410842
    808588 8fkr:L8 (2.89) BS01 rna ? GO:0002181 ... P50914 37410842
    808589 8fkr:L9 (2.89) BS01 rna ? GO:0002181 ... P61313 37410842
    808590 8fkr:L9 (2.89) BS02 rna ? GO:0002181 ... P61313 37410842
    808591 8fkr:L9 (2.89) BS03 MG ? GO:0002181 ... P61313 37410842
    808592 8fkr:LA (2.89) BS01 rna ? GO:0002181 ... P18621 37410842
    808593 8fkr:LA (2.89) BS02 rna ? GO:0002181 ... P18621 37410842
    808594 8fkr:LB (2.89) BS01 rna ? GO:0002181 ... Q07020 37410842
    808595 8fkr:LC (2.89) BS01 rna ? GO:0002181 ... Q02543 37410842
    808596 8fkr:LE (2.89) BS01 rna ? GO:0001650 ... P46778 37410842
    808597 8fkr:LH (2.89) BS01 rna ? GO:0002181 ... P62750 37410842
    808598 8fkr:LH (2.89) BS02 rna ? GO:0002181 ... P62750 37410842
    808599 8fkr:LI (2.89) BS01 rna ? GO:0002181 ... P61254 37410842
    808600 8fkr:LI (2.89) BS02 rna ? GO:0002181 ... P61254 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).