SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810201 8flf:SD (2.65) BS02 rna ? GO:0000463 ... P18124 37410842
    810202 8flf:SE (2.65) BS01 rna ? GO:0000470 ... P62424 37410842
    810203 8flf:SE (2.65) BS02 rna ? GO:0000470 ... P62424 37410842
    810204 8flf:SF (2.65) BS01 rna ? GO:0002181 ... P62917 37410842
    810205 8flf:SF (2.65) BS02 MG ? GO:0002181 ... P62917 37410842
    810206 8flf:SG (2.65) BS01 rna ? GO:0002181 ... P32969 37410842
    810207 8flf:SK (2.65) BS01 rna ? GO:0000054 ... P56537 37410842
    810208 8flf:SQ (2.65) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    810209 8flf:SR (2.65) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    810210 8flf:SR (2.65) BS02 rna ? GO:0001649 ... Q9BZE4 37410842
    810211 8flf:SV (2.65) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    810212 8flf:SV (2.65) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    810213 8flg:A (2.2) BS01 Y8C 2.7.10.2 GO:0004672 ... Q06187 36538993
    810214 8flh:A (1.55) BS01 Y8H 2.7.10.2 GO:0004672 ... Q06187 36538993
    810215 8fli:B (3.8) BS01 rna ? GO:0003676 ... Q8DMK2 38057551
    810216 8flj:A (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810217 8flj:A (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810218 8flj:A (3.48) BS03 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810219 8flj:A (3.48) BS04 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810220 8flj:B (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810221 8flj:C (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810222 8flj:C (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810223 8flj:D (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810224 8flj:D (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    810225 8flj:E (3.48) BS01 dna ? GO:0000976 ... Q02NN5 37710013
    810226 8flj:F (3.48) BS01 dna ? GO:0003677 ... Q02PW7 37710013
    810227 8flj:F (3.48) BS02 dna ? GO:0003677 ... Q02PW7 37710013
    810228 8flj:G (3.48) BS01 dna ? GO:0000976 ... Q02NN5 37710013
    810229 8flj:G (3.48) BS02 dna ? GO:0000976 ... Q02NN5 37710013
    810230 8flj:H (3.48) BS01 dna ? GO:0003677 ... Q02PW7 37710013
    810231 8flj:H (3.48) BS02 dna ? GO:0003677 ... Q02PW7 37710013
    810232 8flj:M (3.48) BS01 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810233 8flj:M (3.48) BS02 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810234 8flj:M (3.48) BS03 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810235 8flj:M (3.48) BS04 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810236 8flj:N (3.48) BS01 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810237 8flj:N (3.48) BS02 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810238 8flj:N (3.48) BS03 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810239 8flj:N (3.48) BS04 dna 3.1.-.-
    3.6.4.-
    N/A Q02ML8 37710013
    810240 8flk:A (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    810241 8flk:A (4.0) BS02 Y6H ? GO:0000045 ... Q86WV6 37828400
    810242 8flk:B (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    810243 8flk:C (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    810244 8flk:C (4.0) BS02 Y6H ? GO:0000045 ... Q86WV6 37828400
    810245 8flk:D (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    810246 8fll:A (1.498) BS01 Y7W 2.7.10.2 GO:0004672 ... Q06187 36796019
    810247 8flm:A (2.9) BS01 Y6H ? GO:0000045 ... Q86WV6 37828400
    810248 8flm:A (2.9) BS02 1SY ? GO:0000045 ... Q86WV6 37828400
    810249 8flm:A (2.9) BS03 9IM ? GO:0000045 ... Q86WV6 37828400
    810250 8flm:B (2.9) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    810251 8flm:B (2.9) BS02 9IM ? GO:0000045 ... Q86WV6 37828400
    810252 8flm:C (2.9) BS01 Y6H ? GO:0000045 ... Q86WV6 37828400
    810253 8flm:C (2.9) BS02 9IM ? GO:0000045 ... Q86WV6 37828400
    810254 8flm:C (2.9) BS03 1SY ? GO:0000045 ... Q86WV6 37828400
    810255 8flm:D (2.9) BS01 9IM ? GO:0000045 ... Q86WV6 37828400
    810256 8flm:D (2.9) BS02 1SY ? GO:0000045 ... Q86WV6 37828400
    810257 8fln:A (1.334) BS01 Y7W 2.7.10.2 GO:0004672 ... Q06187 36796019
    810258 8flo:A (1.71) BS01 HEM ? GO:0004497 ... B2HHT9 36842492
    810259 8flo:A (1.71) BS02 SO4 ? GO:0004497 ... B2HHT9 36842492
    810260 8flo:A (1.71) BS03 SO4 ? GO:0004497 ... B2HHT9 36842492
    810261 8flt:R (3.03) BS01 peptide ? GO:0001501 ... Q03431 37148874
    810262 8flv:A (1.3) BS01 ZB9 2.7.10.2 GO:0004672 ... Q06187 36538993
    810263 8flw:H (3.58) BS01 BMA N/A N/A N/A 37436900
    810264 8flw:H (3.58) BS02 MAN N/A N/A N/A 37436900
    810265 8flw:L (3.58) BS01 BMA N/A N/A N/A 37436900
    810266 8fly:A (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    810267 8fly:B (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    810268 8fly:C (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    810269 8fly:D (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    810270 8flz:A (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    810271 8flz:B (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    810272 8flz:C (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    810273 8flz:D (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    810274 8fm0:A (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    810275 8fm0:B (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    810276 8fm0:C (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    810277 8fm0:D (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    810278 8fm1:A (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810279 8fm1:B (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810280 8fm1:C (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810281 8fm1:D (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810282 8fm1:E (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810283 8fm1:F (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810284 8fm1:G (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810285 8fm1:H (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810286 8fm1:I (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810287 8fm1:J (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810288 8fm1:K (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810289 8fm1:L (3.16) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810290 8fm2:A (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    810291 8fm2:B (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    810292 8fm2:C (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    810293 8fm2:D (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    810294 8fm3:A (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    810295 8fm3:B (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    810296 8fm3:C (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    810297 8fm3:D (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    810298 8fm4:A (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    810299 8fm4:B (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    810300 8fm4:C (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    810301 8fm4:D (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    810302 8fm5:A (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    810303 8fm5:B (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    810304 8fm5:C (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    810305 8fm5:D (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    810306 8fm6:A (2.85) BS01 HEB ? N/A P73129 38609367
    810307 8fm6:B (2.85) BS01 HEB ? N/A P73129 38609367
    810308 8fm7:A (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    810309 8fm7:B (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    810310 8fm7:C (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    810311 8fm7:D (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    810312 8fm8:A (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    810313 8fm8:B (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    810314 8fm8:C (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    810315 8fm8:D (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    810316 8fmf:A (2.1) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810317 8fmf:A (2.1) BS02 RWB ? N/A A0A2P0QGK5 38321146
    810318 8fmf:A (2.1) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810319 8fmf:A (2.1) BS04 MG ? N/A A0A2P0QGK5 38321146
    810320 8fmf:B (2.1) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810321 8fmf:B (2.1) BS02 RWB ? N/A A0A2P0QGK5 38321146
    810322 8fmf:B (2.1) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810323 8fmf:B (2.1) BS04 ZN ? N/A A0A2P0QGK5 38321146
    810324 8fmf:B (2.1) BS05 MG ? N/A A0A2P0QGK5 38321146
    810325 8fmf:C (2.1) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810326 8fmf:C (2.1) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810327 8fmf:C (2.1) BS03 MG ? N/A A0A2P0QGK5 38321146
    810328 8fmf:D (2.1) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810329 8fmf:D (2.1) BS02 Y4F ? N/A A0A2P0QGK5 38321146
    810330 8fmf:D (2.1) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810331 8fmf:D (2.1) BS04 MG ? N/A A0A2P0QGK5 38321146
    810332 8fmg:A (1.79) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810333 8fmg:A (1.79) BS02 MG ? N/A A0A2P0QGK5 38321146
    810334 8fmg:A (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810335 8fmg:B (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810336 8fmg:B (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810337 8fmg:B (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810338 8fmg:C (1.79) BS01 MG ? N/A A0A2P0QGK5 38321146
    810339 8fmg:C (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810340 8fmg:C (1.79) BS03 MG ? N/A A0A2P0QGK5 38321146
    810341 8fmg:C (1.79) BS04 Y4F ? N/A A0A2P0QGK5 38321146
    810342 8fmg:D (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810343 8fmg:D (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810344 8fmg:D (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810345 8fmg:E (1.79) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810346 8fmg:E (1.79) BS02 MG ? N/A A0A2P0QGK5 38321146
    810347 8fmg:E (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810348 8fmg:F (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810349 8fmg:F (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810350 8fmg:F (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810351 8fmg:G (1.79) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810352 8fmg:G (1.79) BS02 MG ? N/A A0A2P0QGK5 38321146
    810353 8fmg:G (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810354 8fmg:H (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810355 8fmg:H (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810356 8fmg:H (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810357 8fmg:K (1.79) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810358 8fmg:K (1.79) BS02 MG ? N/A A0A2P0QGK5 38321146
    810359 8fmg:K (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810360 8fmg:L (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810361 8fmg:L (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810362 8fmg:L (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810363 8fmg:M (1.79) BS01 ZN ? N/A A0A2P0QGK5 38321146
    810364 8fmg:M (1.79) BS02 MG ? N/A A0A2P0QGK5 38321146
    810365 8fmg:M (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810366 8fmg:N (1.79) BS01 Y4F ? N/A A0A2P0QGK5 38321146
    810367 8fmg:N (1.79) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810368 8fmg:N (1.79) BS03 Y4F ? N/A A0A2P0QGK5 38321146
    810369 8fmh:A (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810370 8fmh:A (1.87) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810371 8fmh:A (1.87) BS03 MG ? N/A A0A2P0QGK5 38321146
    810372 8fmh:B (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810373 8fmh:B (1.87) BS02 4UR ? N/A A0A2P0QGK5 38321146
    810374 8fmh:B (1.87) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810375 8fmh:B (1.87) BS04 MG ? N/A A0A2P0QGK5 38321146
    810376 8fmh:C (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810377 8fmh:C (1.87) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810378 8fmh:C (1.87) BS03 MG ? N/A A0A2P0QGK5 38321146
    810379 8fmh:D (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810380 8fmh:D (1.87) BS02 4UR ? N/A A0A2P0QGK5 38321146
    810381 8fmh:D (1.87) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810382 8fmh:E (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810383 8fmh:E (1.87) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810384 8fmh:E (1.87) BS03 MG ? N/A A0A2P0QGK5 38321146
    810385 8fmh:F (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810386 8fmh:F (1.87) BS02 4UR ? N/A A0A2P0QGK5 38321146
    810387 8fmh:F (1.87) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810388 8fmh:F (1.87) BS04 MG ? N/A A0A2P0QGK5 38321146
    810389 8fmh:G (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810390 8fmh:G (1.87) BS02 ZN ? N/A A0A2P0QGK5 38321146
    810391 8fmh:G (1.87) BS03 MG ? N/A A0A2P0QGK5 38321146
    810392 8fmh:H (1.87) BS01 4UR ? N/A A0A2P0QGK5 38321146
    810393 8fmh:H (1.87) BS02 4UR ? N/A A0A2P0QGK5 38321146
    810394 8fmh:H (1.87) BS03 ZN ? N/A A0A2P0QGK5 38321146
    810395 8fmi:A (1.12) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    810396 8fmj:A (1.33) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    810397 8fmk:A (1.48) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    810398 8fmm:A (3.112) BS01 CA ? GO:0002086 ... P63316 N/A
    810399 8fmm:A (3.112) BS02 CA ? GO:0002086 ... P63316 N/A
    810400 8fmm:A (3.112) BS03 CA ? GO:0002086 ... P63316 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).