SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    86401 2gq1:A (1.45) BS01 SO4 3.1.3.11 GO:0000287 ... P0A993 16670087
    86402 2gq1:A (1.45) BS02 SO4 3.1.3.11 GO:0000287 ... P0A993 16670087
    86403 2gq1:A (1.45) BS03 SO4 3.1.3.11 GO:0000287 ... P0A993 16670087
    86404 2gq1:A (1.45) BS04 SO4 3.1.3.11 GO:0000287 ... P0A993 16670087
    86405 2gq2:A (2.1) BS01 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86406 2gq2:A (2.1) BS02 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86407 2gq2:A (2.1) BS03 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86408 2gq2:B (2.1) BS01 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86409 2gq2:B (2.1) BS02 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86410 2gq2:C (2.1) BS01 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86411 2gq2:C (2.1) BS02 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86412 2gq2:D (2.1) BS01 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86413 2gq2:D (2.1) BS02 NAP 2.1.1.148 GO:0004799 ... P9WG57 16730023
    86414 2gq3:A (2.3) BS01 MG 2.3.3.9 GO:0000287 ... P9WK17 16877713
    86415 2gq3:A (2.3) BS02 MG 2.3.3.9 GO:0000287 ... P9WK17 16877713
    86416 2gq3:A (2.3) BS03 COA 2.3.3.9 GO:0000287 ... P9WK17 16877713
    86417 2gq3:B (2.3) BS01 MG 2.3.3.9 GO:0000287 ... P9WK17 16877713
    86418 2gq3:B (2.3) BS02 MG 2.3.3.9 GO:0000287 ... P9WK17 16877713
    86419 2gq8:A (1.7) BS01 AC6 ? GO:0005829 ... Q8EEC8 16857682
    86420 2gq8:A (1.7) BS02 FMN ? GO:0005829 ... Q8EEC8 16857682
    86421 2gq9:A (1.7) BS01 FMN ? GO:0005829 ... Q8EEC8 16857682
    86422 2gq9:A (1.7) BS02 HBA ? GO:0005829 ... Q8EEC8 16857682
    86423 2gq9:A (1.7) BS03 HBA ? GO:0005829 ... Q8EEC8 16857682
    86424 2gqa:A (1.7) BS01 FMN ? GO:0005829 ... Q8EEC8 16857682
    86425 2gqe:A (-1.00) BS01 ZN ? N/A P49790 17426026
    86426 2gqf:A (2.7) BS01 FAD ? GO:0000154 ... P44941 N/A
    86427 2gqg:A (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P00519 16740718 BindingDB: IC50=3.1nM, Kd=1.2nM, EC50=0.040000nM
    86428 2gqg:B (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P00519 16740718 BindingDB: IC50=3.1nM, Kd=1.2nM, EC50=0.040000nM
    86429 2gqj:A (-1.00) BS01 ZN ? GO:0008270 ... Q96KM6 N/A
    86430 2gqj:A (-1.00) BS02 ZN ? GO:0008270 ... Q96KM6 N/A
    86431 2gqk:A (-1.00) BS01 NI ? N/A O75880 16735468
    86432 2gql:A (-1.00) BS01 NI ? N/A O75880 16735468
    86433 2gqm:A (-1.00) BS01 CU1 ? N/A O75880 16735468
    86434 2gqn:A (1.8) BS01 BLP 4.4.1.13
    4.4.1.28
    GO:0000096 ... P06721 17300162
    86435 2gqn:B (1.8) BS01 BLP 4.4.1.13
    4.4.1.28
    GO:0000096 ... P06721 17300162
    86436 2gqp:A (1.5) BS01 PA7 ? GO:0005524 ... P41148 N/A
    86437 2gqp:B (1.5) BS01 PA7 ? GO:0005524 ... P41148 N/A
    86438 2gqr:A (2.0) BS01 ADP 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86439 2gqr:B (2.0) BS01 ADP 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86440 2gqs:A (2.05) BS01 MG 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86441 2gqs:A (2.05) BS02 MG 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86442 2gqs:A (2.05) BS03 ADP 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86443 2gqs:A (2.05) BS04 C2R 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86444 2gqs:B (2.05) BS01 MG 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86445 2gqs:B (2.05) BS02 MG 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86446 2gqs:B (2.05) BS03 ADP 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86447 2gqs:B (2.05) BS04 C2R 6.3.2.6 GO:0004639 ... P0A7D7 16687397
    86448 2gqt:A (1.3) BS01 FAD 1.3.1.98 GO:0005737 ... Q5SJC8 17120230
    86449 2gqu:A (1.6) BS01 FAD 1.3.1.98 GO:0005737 ... Q5SJC8 17120230
    86450 2gqu:A (1.6) BS02 EPU 1.3.1.98 GO:0005737 ... Q5SJC8 17120230
    86451 2gqw:A (1.4) BS01 FAD 1.18.1.2 GO:0005737 ... Q52437 17850818
    86452 2gqx:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 17962225
    86453 2gqx:A (2.1) BS02 5CL 1.14.15.1 GO:0004497 ... P00183 17962225 MOAD: Kd=1.71uM
    86454 2gqx:B (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 17962225
    86455 2gr0:A (1.7) BS01 FAD 1.18.1.2 GO:0005737 ... Q52437 17850818
    86456 2gr0:A (1.7) BS02 ADP 1.18.1.2 GO:0005737 ... Q52437 17850818
    86457 2gr1:A (1.8) BS01 FAD 1.18.1.2 GO:0005737 ... Q52437 N/A
    86458 2gr2:A (1.85) BS01 FAD 1.18.1.2 GO:0005737 ... Q52437 N/A
    86459 2gr2:A (1.85) BS02 APR 1.18.1.2 GO:0005737 ... Q52437 N/A
    86460 2gr3:A (1.5) BS01 FAD 1.18.1.2 GO:0005737 ... Q52437 N/A
    86461 2gr6:A (2.3) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    86462 2gr6:B (2.3) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    86463 2gr7:B (2.3) BS01 C8E ? N/A Q48152 16688217
    86464 2gr7:C (2.3) BS01 C8E ? N/A Q48152 16688217
    86465 2gr7:D (2.3) BS01 C8E ? N/A Q48152 16688217
    86466 2gr7:E (2.3) BS01 C8E ? N/A Q48152 16688217
    86467 2gr7:E (2.3) BS02 C8E ? N/A Q48152 16688217
    86468 2gr9:A (3.1) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 16730026
    86469 2gr9:B (3.1) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 16730026
    86470 2gr9:C (3.1) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 16730026
    86471 2gr9:D (3.1) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 16730026
    86472 2gr9:E (3.1) BS01 NAI 1.5.1.2 GO:0004735 ... P32322 16730026
    86473 2gra:A (3.1) BS01 NAP 1.5.1.2 GO:0004735 ... P32322 16730026
    86474 2gra:B (3.1) BS01 NAP 1.5.1.2 GO:0004735 ... P32322 16730026
    86475 2gra:C (3.1) BS01 NAP 1.5.1.2 GO:0004735 ... P32322 16730026
    86476 2gra:D (3.1) BS01 NAP 1.5.1.2 GO:0004735 ... P32322 16730026
    86477 2gra:E (3.1) BS01 NAP 1.5.1.2 GO:0004735 ... P32322 16730026
    86478 2grf:A (2.1) BS01 HEM ? GO:0005737 ... P02213 16684887
    86479 2grf:A (2.1) BS02 HEM ? GO:0005737 ... P02213 16684887
    86480 2grf:B (2.1) BS01 HEM ? GO:0005737 ... P02213 16684887
    86481 2grf:B (2.1) BS02 HEM ? GO:0005737 ... P02213 16684887
    86482 2grh:A (1.5) BS01 HEM ? GO:0005737 ... P02213 16684887
    86483 2grh:A (1.5) BS02 HEM ? GO:0005737 ... P02213 16684887
    86484 2grh:B (1.5) BS01 HEM ? GO:0005737 ... P02213 16684887
    86485 2grh:B (1.5) BS02 HEM ? GO:0005737 ... P02213 16684887
    86486 2grj:A (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86487 2grj:A (2.6) BS02 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86488 2grj:A (2.6) BS03 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86489 2grj:B (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86490 2grj:B (2.6) BS02 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86491 2grj:B (2.6) BS03 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86492 2grj:C (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86493 2grj:C (2.6) BS02 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86494 2grj:C (2.6) BS03 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86495 2grj:D (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86496 2grj:D (2.6) BS02 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86497 2grj:D (2.6) BS03 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86498 2grj:E (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86499 2grj:E (2.6) BS02 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86500 2grj:E (2.6) BS03 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86501 2grj:F (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86502 2grj:F (2.6) BS02 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86503 2grj:F (2.6) BS03 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86504 2grj:G (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86505 2grj:G (2.6) BS02 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86506 2grj:G (2.6) BS03 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86507 2grj:H (2.6) BS01 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86508 2grj:H (2.6) BS02 ADP 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86509 2grj:H (2.6) BS03 COD 2.7.1.24 GO:0004140 ... Q9X1A7 N/A
    86510 2grl:B (3.0) BS01 peptide ? GO:0003677 ... Q04114 17038121
    86511 2grm:A (3.0) BS01 peptide ? GO:0003677 ... Q04114 17038121
    86512 2grm:B (3.0) BS01 peptide ? GO:0003677 ... Q04114 17038121
    86513 2grt:A (2.7) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9174360
    86514 2grt:A (2.7) BS02 GDS 1.8.1.7 GO:0004362 ... P00390 9174360
    86515 2gru:A (2.15) BS01 CO 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86516 2gru:A (2.15) BS02 SO3 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86517 2gru:A (2.15) BS03 PO4 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86518 2gru:A (2.15) BS04 NAD 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86519 2gru:A (2.15) BS05 EXO 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86520 2gru:B (2.15) BS01 CO 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86521 2gru:B (2.15) BS02 SO3 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86522 2gru:B (2.15) BS03 NAD 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86523 2gru:B (2.15) BS04 CAK 4.2.3.124 GO:0003856 ... Q9S5E2 17879343
    86524 2grx:A (3.3) BS01 FCI ? GO:0009279 ... P06971 16741125
    86525 2grx:B (3.3) BS01 FCI ? GO:0009279 ... P06971 16741125
    86526 2gry:A (2.35) BS01 ADP ? GO:0003777 ... O00139 N/A
    86527 2grz:A (1.6) BS01 HEM ? GO:0005737 ... P02213 16684887
    86528 2grz:A (1.6) BS02 HEM ? GO:0005737 ... P02213 16684887
    86529 2grz:B (1.6) BS01 HEM ? GO:0005737 ... P02213 16684887
    86530 2grz:B (1.6) BS02 HEM ? GO:0005737 ... P02213 16684887
    86531 2gs0:A (-1.00) BS01 peptide ? N/A P32776 16793543
    86532 2gs6:A (2.6) BS01 peptide 2.7.10.1 GO:0004672 ... P00533 16777603
    86533 2gs6:A (2.6) BS02 112 2.7.10.1 GO:0004672 ... P00533 16777603
    86534 2gs7:A (2.6) BS01 MG 2.7.10.1 GO:0004672 ... P00533 16777603
    86535 2gs7:A (2.6) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 16777603
    86536 2gs7:B (2.6) BS01 MG 2.7.10.1 GO:0004672 ... P00533 16777603
    86537 2gs7:B (2.6) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 16777603
    86538 2gs9:A (2.6) BS01 SAH ? GO:0008168 ... Q5SL11 N/A
    86539 2gs9:B (2.6) BS01 SAH ? GO:0008168 ... Q5SL11 N/A
    86540 2gsa:A (2.4) BS01 PMP 5.4.3.8 GO:0005737 ... P24630 9144156
    86541 2gsa:B (2.4) BS01 PLP 5.4.3.8 GO:0005737 ... P24630 9144156
    86542 2gsd:A (1.95) BS01 AZI 1.17.1.9 GO:0005737 ... A0ACD6B9E8 19966418
    86543 2gsd:A (1.95) BS02 NAD 1.17.1.9 GO:0005737 ... A0ACD6B9E8 19966418
    86544 2gsh:A (2.393) BS01 MG 4.2.1.90 GO:0000287 ... Q8ZNF9 N/A
    86545 2gsh:B (2.393) BS01 MG 4.2.1.90 GO:0000287 ... Q8ZNF9 N/A
    86546 2gsi:A (2.81) BS01 peptide N/A N/A N/A N/A
    86547 2gsi:B (2.81) BS01 peptide ? N/A Q6PF95 N/A
    86548 2gsi:C (2.81) BS01 peptide N/A N/A N/A N/A
    86549 2gsi:D (2.81) BS01 peptide ? N/A Q6PF95 N/A
    86550 2gsi:E (2.81) BS01 peptide N/A N/A N/A N/A
    86551 2gsi:F (2.81) BS01 peptide ? N/A Q6PF95 N/A
    86552 2gsi:G (2.81) BS01 peptide N/A N/A N/A N/A
    86553 2gsi:H (2.81) BS01 peptide ? N/A Q6PF95 N/A
    86554 2gsk:A (2.1) BS01 CA ? GO:0005509 ... P06129 16741124
    86555 2gsk:A (2.1) BS02 CA ? GO:0005509 ... P06129 16741124
    86556 2gsk:A (2.1) BS03 CNC ? GO:0005509 ... P06129 16741124
    86557 2gsl:A (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86558 2gsl:B (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86559 2gsl:C (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86560 2gsl:D (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86561 2gsl:E (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86562 2gsl:F (2.6) BS01 MG ? GO:0000476 ... Q8RIL0 N/A
    86563 2gsm:A (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86564 2gsm:A (2.0) BS02 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86565 2gsm:A (2.0) BS03 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86566 2gsm:A (2.0) BS04 CU 7.1.1.9 GO:0004129 ... P33517 17050688
    86567 2gsm:A (2.0) BS05 MG 7.1.1.9 GO:0004129 ... P33517 17050688
    86568 2gsm:A (2.0) BS06 CA 7.1.1.9 GO:0004129 ... P33517 17050688
    86569 2gsm:A (2.0) BS07 HEA 7.1.1.9 GO:0004129 ... P33517 17050688
    86570 2gsm:A (2.0) BS08 HEA 7.1.1.9 GO:0004129 ... P33517 17050688
    86571 2gsm:A (2.0) BS09 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86572 2gsm:B (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86573 2gsm:B (2.0) BS02 DMU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86574 2gsm:B (2.0) BS03 CU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86575 2gsm:B (2.0) BS04 CU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86576 2gsm:B (2.0) BS05 CD 7.1.1.9 GO:0004129 ... Q03736 17050688
    86577 2gsm:B (2.0) BS06 CD 7.1.1.9 GO:0004129 ... Q03736 17050688
    86578 2gsm:C (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86579 2gsm:C (2.0) BS02 DMU 7.1.1.9 GO:0004129 ... P33517 17050688
    86580 2gsm:C (2.0) BS03 CU 7.1.1.9 GO:0004129 ... P33517 17050688
    86581 2gsm:C (2.0) BS04 MG 7.1.1.9 GO:0004129 ... P33517 17050688
    86582 2gsm:C (2.0) BS05 CA 7.1.1.9 GO:0004129 ... P33517 17050688
    86583 2gsm:C (2.0) BS06 HEA 7.1.1.9 GO:0004129 ... P33517 17050688
    86584 2gsm:C (2.0) BS07 HEA 7.1.1.9 GO:0004129 ... P33517 17050688
    86585 2gsm:D (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86586 2gsm:D (2.0) BS02 DMU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86587 2gsm:D (2.0) BS03 CU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86588 2gsm:D (2.0) BS04 CU 7.1.1.9 GO:0004129 ... Q03736 17050688
    86589 2gsm:D (2.0) BS05 CD 7.1.1.9 GO:0004129 ... Q03736 17050688
    86590 2gsm:D (2.0) BS06 CD 7.1.1.9 GO:0004129 ... Q03736 17050688
    86591 2gsn:A (1.75) BS01 ZN N/A N/A N/A 16893180
    86592 2gsn:A (1.75) BS02 ZN N/A N/A N/A 16893180
    86593 2gsn:B (1.75) BS01 ZN N/A N/A N/A 16893180
    86594 2gsn:B (1.75) BS02 ZN N/A N/A N/A 16893180
    86595 2gso:A (1.3) BS01 ZN N/A N/A N/A 16893180
    86596 2gso:A (1.3) BS02 ZN N/A N/A N/A 16893180
    86597 2gso:A (1.3) BS03 VO4 N/A N/A N/A 16893180
    86598 2gso:B (1.3) BS01 ZN N/A N/A N/A 16893180
    86599 2gso:B (1.3) BS02 ZN N/A N/A N/A 16893180
    86600 2gso:B (1.3) BS03 VO4 N/A N/A N/A 16893180

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).