SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    869401 8rsk:A (2.359) BS03 A1H20 N/A GO:0016787 ... A0A166ACJ5 39270823
    869402 8rsk:B (2.359) BS01 ZN N/A GO:0016787 ... A0A166ACJ5 39270823
    869403 8rsk:B (2.359) BS02 ZN N/A GO:0016787 ... A0A166ACJ5 39270823
    869404 8rsk:B (2.359) BS03 A1H20 N/A GO:0016787 ... A0A166ACJ5 39270823
    869405 8rsk:C (2.359) BS01 ZN N/A GO:0016787 ... A0A166ACJ5 39270823
    869406 8rsk:C (2.359) BS02 ZN N/A GO:0016787 ... A0A166ACJ5 39270823
    869407 8rsk:C (2.359) BS03 A1H20 N/A GO:0016787 ... A0A166ACJ5 39270823
    869408 8rsl:A (1.94) BS01 ZN N/A GO:0016491 ... Q2G149 39270823
    869409 8rsl:B (1.94) BS01 ZN N/A GO:0016491 ... Q2G149 39270823
    869410 8rsm:A (1.87) BS01 ZN N/A GO:0004649 ... Q99ZI6 39270823
    869411 8rsm:A (1.87) BS02 AR6 N/A GO:0004649 ... Q99ZI6 39270823
    869412 8rsn:A (2.219) BS01 ZN N/A GO:0004721 ... A0A559KX76 39270823
    869413 8rsn:B (2.219) BS01 ZN N/A GO:0004721 ... A0A559KX76 39270823
    869414 8rst:A (2.56) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869415 8rst:A (2.56) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869416 8rst:A (2.56) BS03 FU1 N/A N/A A0A1P8CWN8 39137235
    869417 8rst:A (2.56) BS04 FU1 N/A N/A A0A1P8CWN8 39137235
    869418 8rsu:A (2.4) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869419 8rsu:A (2.4) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869420 8rsv:A (2.19) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869421 8rsv:A (2.19) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869422 8rsv:B (2.19) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869423 8rsv:B (2.19) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869424 8rt2:A (0.8) BS01 DO3 3.2.1.17 GO:0003796 ... P00698 N/A
    869425 8rt3:A (1.09) BS01 DO3 3.2.1.17 GO:0003796 ... P00698 N/A
    869426 8rt4:A (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869427 8rt4:B (2.46) BS01 peptide N/A N/A O50336 38886579
    869428 8rt4:D (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869429 8rt4:E (2.46) BS01 peptide N/A N/A O50336 38886579
    869430 8rt4:G (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869431 8rt4:H (2.46) BS01 peptide N/A N/A O50336 38886579
    869432 8rt4:J (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869433 8rt4:K (2.46) BS01 peptide N/A N/A O50336 38886579
    869434 8rt4:M (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869435 8rt4:N (2.46) BS01 peptide N/A N/A O50336 38886579
    869436 8rt4:P (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869437 8rt4:Q (2.46) BS01 peptide N/A N/A O50336 38886579
    869438 8rt4:S (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869439 8rt4:T (2.46) BS01 peptide N/A N/A O50336 38886579
    869440 8rt4:V (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869441 8rt4:W (2.46) BS01 peptide N/A N/A O50336 38886579
    869442 8rt4:Y (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869443 8rt4:Z (2.46) BS01 peptide N/A N/A O50336 38886579
    869444 8rt4:b (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869445 8rt4:c (2.46) BS01 peptide N/A N/A O50336 38886579
    869446 8rt4:e (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869447 8rt4:f (2.46) BS01 peptide N/A N/A O50336 38886579
    869448 8rt4:h (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869449 8rt4:i (2.46) BS01 peptide N/A N/A O50336 38886579
    869450 8rt4:k (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869451 8rt4:l (2.46) BS01 peptide N/A N/A O50336 38886579
    869452 8rt4:n (2.46) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869453 8rt4:o (2.46) BS01 peptide N/A N/A O50336 38886579
    869454 8rt5:B (2.69) BS01 peptide N/A N/A O50336 38886579
    869455 8rt5:B (2.69) BS02 peptide N/A N/A O50336 38886579
    869456 8rt5:E (2.69) BS01 peptide N/A N/A O50336 38886579
    869457 8rt5:E (2.69) BS02 peptide N/A N/A O50336 38886579
    869458 8rt5:H (2.69) BS01 peptide N/A N/A O50336 38886579
    869459 8rt5:H (2.69) BS02 peptide N/A N/A O50336 38886579
    869460 8rt5:K (2.69) BS01 peptide N/A N/A O50336 38886579
    869461 8rt5:K (2.69) BS02 peptide N/A N/A O50336 38886579
    869462 8rt5:N (2.69) BS01 peptide N/A N/A O50336 38886579
    869463 8rt5:N (2.69) BS02 peptide N/A N/A O50336 38886579
    869464 8rt5:Q (2.69) BS01 peptide N/A N/A O50336 38886579
    869465 8rt5:Q (2.69) BS02 peptide N/A N/A O50336 38886579
    869466 8rt5:T (2.69) BS01 peptide N/A N/A O50336 38886579
    869467 8rt5:T (2.69) BS02 peptide N/A N/A O50336 38886579
    869468 8rt5:W (2.69) BS01 peptide N/A N/A O50336 38886579
    869469 8rt5:W (2.69) BS02 peptide N/A N/A O50336 38886579
    869470 8rt5:Z (2.69) BS01 peptide N/A N/A O50336 38886579
    869471 8rt5:Z (2.69) BS02 peptide N/A N/A O50336 38886579
    869472 8rt5:c (2.69) BS01 peptide N/A N/A O50336 38886579
    869473 8rt5:c (2.69) BS02 peptide N/A N/A O50336 38886579
    869474 8rt5:f (2.69) BS01 peptide N/A N/A O50336 38886579
    869475 8rt5:f (2.69) BS02 peptide N/A N/A O50336 38886579
    869476 8rt5:i (2.69) BS01 peptide N/A N/A O50336 38886579
    869477 8rt5:i (2.69) BS02 peptide N/A N/A O50336 38886579
    869478 8rt5:l (2.69) BS01 peptide N/A N/A O50336 38886579
    869479 8rt5:l (2.69) BS02 peptide N/A N/A O50336 38886579
    869480 8rt5:o (2.69) BS01 peptide N/A N/A O50336 38886579
    869481 8rt5:o (2.69) BS02 peptide N/A N/A O50336 38886579
    869482 8rt5:v (2.69) BS01 peptide N/A N/A O50336 38886579
    869483 8rt5:v (2.69) BS02 peptide N/A N/A O50336 38886579
    869484 8rt5:z (2.69) BS01 peptide N/A N/A O50336 38886579
    869485 8rt5:z (2.69) BS02 peptide N/A N/A O50336 38886579
    869486 8rt6:A (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869487 8rt6:B (3.18) BS01 peptide N/A N/A O50336 38886579
    869488 8rt6:B (3.18) BS02 peptide N/A N/A O50336 38886579
    869489 8rt6:D (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869490 8rt6:E (3.18) BS01 peptide N/A N/A O50336 38886579
    869491 8rt6:H (3.18) BS01 peptide N/A N/A O50336 38886579
    869492 8rt6:J (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869493 8rt6:K (3.18) BS01 peptide N/A N/A O50336 38886579
    869494 8rt6:N (3.18) BS01 peptide N/A N/A O50336 38886579
    869495 8rt6:P (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869496 8rt6:Q (3.18) BS01 peptide N/A N/A O50336 38886579
    869497 8rt6:S (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869498 8rt6:T (3.18) BS01 peptide N/A N/A O50336 38886579
    869499 8rt6:V (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869500 8rt6:W (3.18) BS01 peptide N/A N/A O50336 38886579
    869501 8rt6:W (3.18) BS02 peptide N/A N/A O50336 38886579
    869502 8rt6:Y (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869503 8rt6:Z (3.18) BS01 peptide N/A N/A O50336 38886579
    869504 8rt6:c (3.18) BS01 peptide N/A N/A O50336 38886579
    869505 8rt6:f (3.18) BS01 peptide N/A N/A O50336 38886579
    869506 8rt6:h (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869507 8rt6:i (3.18) BS01 peptide N/A N/A O50336 38886579
    869508 8rt6:k (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869509 8rt6:l (3.18) BS01 peptide N/A N/A O50336 38886579
    869510 8rt6:n (3.18) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869511 8rt6:o (3.18) BS01 peptide N/A N/A O50336 38886579
    869512 8rt6:v (3.18) BS01 peptide N/A N/A O50336 38886579
    869513 8rt6:z (3.18) BS01 peptide N/A N/A O50336 38886579
    869514 8rt7:A (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869515 8rt7:B (2.93) BS01 peptide N/A N/A O50336 38886579
    869516 8rt7:D (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869517 8rt7:E (2.93) BS01 peptide N/A N/A O50336 38886579
    869518 8rt7:G (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869519 8rt7:H (2.93) BS01 peptide N/A N/A O50336 38886579
    869520 8rt7:J (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869521 8rt7:K (2.93) BS01 peptide N/A N/A O50336 38886579
    869522 8rt7:M (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869523 8rt7:N (2.93) BS01 peptide N/A N/A O50336 38886579
    869524 8rt7:P (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869525 8rt7:Q (2.93) BS01 peptide N/A N/A O50336 38886579
    869526 8rt7:S (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869527 8rt7:T (2.93) BS01 peptide N/A N/A O50336 38886579
    869528 8rt7:V (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869529 8rt7:W (2.93) BS01 peptide N/A N/A O50336 38886579
    869530 8rt7:W (2.93) BS02 peptide N/A N/A O50336 38886579
    869531 8rt7:Y (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869532 8rt7:Z (2.93) BS01 peptide N/A N/A O50336 38886579
    869533 8rt7:b (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869534 8rt7:c (2.93) BS01 peptide N/A N/A O50336 38886579
    869535 8rt7:e (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869536 8rt7:f (2.93) BS01 peptide N/A N/A O50336 38886579
    869537 8rt7:h (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869538 8rt7:i (2.93) BS01 peptide N/A N/A O50336 38886579
    869539 8rt7:k (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869540 8rt7:l (2.93) BS01 peptide N/A N/A O50336 38886579
    869541 8rt7:n (2.93) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869542 8rt7:o (2.93) BS01 peptide N/A N/A O50336 38886579
    869543 8rt7:o (2.93) BS02 peptide N/A N/A O50336 38886579
    869544 8rt7:v (2.93) BS01 peptide N/A N/A O50336 38886579
    869545 8rt7:z (2.93) BS01 peptide N/A N/A O50336 38886579
    869546 8rt8:A (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869547 8rt8:B (3.05) BS01 peptide N/A N/A O50336 38886579
    869548 8rt8:D (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869549 8rt8:E (3.05) BS01 peptide N/A N/A O50336 38886579
    869550 8rt8:E (3.05) BS02 peptide N/A N/A O50336 38886579
    869551 8rt8:G (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869552 8rt8:H (3.05) BS01 peptide N/A N/A O50336 38886579
    869553 8rt8:J (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869554 8rt8:K (3.05) BS01 peptide N/A N/A O50336 38886579
    869555 8rt8:M (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869556 8rt8:N (3.05) BS01 peptide N/A N/A O50336 38886579
    869557 8rt8:P (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869558 8rt8:Q (3.05) BS01 peptide N/A N/A O50336 38886579
    869559 8rt8:S (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869560 8rt8:T (3.05) BS01 peptide N/A N/A O50336 38886579
    869561 8rt8:T (3.05) BS02 peptide N/A N/A O50336 38886579
    869562 8rt8:V (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869563 8rt8:W (3.05) BS01 peptide N/A N/A O50336 38886579
    869564 8rt8:Y (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869565 8rt8:Z (3.05) BS01 peptide N/A N/A O50336 38886579
    869566 8rt8:b (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869567 8rt8:c (3.05) BS01 peptide N/A N/A O50336 38886579
    869568 8rt8:e (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869569 8rt8:f (3.05) BS01 peptide N/A N/A O50336 38886579
    869570 8rt8:h (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869571 8rt8:i (3.05) BS01 peptide N/A N/A O50336 38886579
    869572 8rt8:k (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869573 8rt8:l (3.05) BS01 peptide N/A N/A O50336 38886579
    869574 8rt8:n (3.05) BS01 peptide N/A GO:0005515 ... O50337 38886579
    869575 8rt8:o (3.05) BS01 peptide N/A N/A O50336 38886579
    869576 8rt8:v (3.05) BS01 peptide N/A N/A O50336 38886579
    869577 8rt8:z (3.05) BS01 peptide N/A N/A O50336 38886579
    869578 8rta:E (6.22) BS01 peptide N/A GO:0005515 ... O50335 38886579
    869579 8rtc:A (2.83) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869580 8rtc:A (2.83) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869581 8rtc:A (2.83) BS03 A1H22 N/A N/A A0A1P8CWN8 39137235
    869582 8rtc:A (2.83) BS04 A1H22 N/A N/A A0A1P8CWN8 39137235
    869583 8rtc:B (2.83) BS01 peptide N/A N/A A0A1P8CWN8 39137235
    869584 8rtc:B (2.83) BS02 A1H22 N/A N/A A0A1P8CWN8 39137235
    869585 8rte:A (2.4) BS01 peptide N/A N/A D6R410 39137235
    869586 8rte:B (2.4) BS01 peptide N/A N/A D6R410 39137235
    869587 8rtg:A (1.461) BS01 SF4 N/A N/A P07598 N/A
    869588 8rtg:A (1.461) BS02 SF4 N/A N/A P07598 N/A
    869589 8rtg:A (1.461) BS03 SF4 N/A N/A P07598 N/A
    869590 8rth:A (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794
    869591 8rth:B (2.37) BS01 BTI 6.4.1.4 GO:0004485 ... Q385A6 38593794
    869592 8rth:C (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794
    869593 8rth:D (2.37) BS01 BTI 6.4.1.4 GO:0004485 ... Q385A6 38593794
    869594 8rth:E (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794
    869595 8rth:F (2.37) BS01 BTI 6.4.1.4 GO:0004485 ... Q385A6 38593794
    869596 8rth:G (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794
    869597 8rth:H (2.37) BS01 BTI 6.4.1.4 GO:0004485 ... Q385A6 38593794
    869598 8rth:I (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794
    869599 8rth:J (2.37) BS01 BTI 6.4.1.4 GO:0004485 ... Q385A6 38593794
    869600 8rth:K (2.37) BS01 BTI ? GO:0004485 ... Q57YQ4 38593794

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).