SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    887201 8tlk:B (2.99) BS03 ZN N/A GO:0006355 ... Q9BWT1 38168392
    887202 8tlk:B (2.99) BS04 ZN N/A GO:0006355 ... Q9BWT1 38168392
    887203 8tll:A (2.58) BS01 dna N/A GO:0006355 ... Q9D0M2 39178265
    887204 8tll:A (2.58) BS02 dna N/A GO:0006355 ... Q9D0M2 39178265
    887205 8tll:A (2.58) BS03 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887206 8tll:A (2.58) BS04 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887207 8tll:A (2.58) BS05 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887208 8tll:B (2.58) BS01 dna N/A GO:0006355 ... Q9D0M2 39178265
    887209 8tll:B (2.58) BS02 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887210 8tll:B (2.58) BS03 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887211 8tll:B (2.58) BS04 ZN N/A GO:0006355 ... Q9D0M2 39178265
    887212 8tln:E (1.6) BS01 VAL 3.4.24.27 GO:0004222 ... P00800 1445869
    887213 8tln:E (1.6) BS02 LYS 3.4.24.27 GO:0004222 ... P00800 1445869
    887214 8tln:E (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 1445869
    887215 8tln:E (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 1445869
    887216 8tln:E (1.6) BS05 CA 3.4.24.27 GO:0004222 ... P00800 1445869
    887217 8tln:E (1.6) BS06 CA 3.4.24.27 GO:0004222 ... P00800 1445869
    887218 8tln:E (1.6) BS07 ZN 3.4.24.27 GO:0004222 ... P00800 1445869
    887219 8tlo:A (2.76) BS01 dna N/A N/A Q9H165 39423807
    887220 8tlo:A (2.76) BS02 dna N/A N/A Q9H165 39423807
    887221 8tlo:A (2.76) BS03 ZN N/A N/A Q9H165 39423807
    887222 8tlo:A (2.76) BS04 ZN N/A N/A Q9H165 39423807
    887223 8tlo:A (2.76) BS05 ZN N/A N/A Q9H165 39423807
    887224 8tlq:A (3.53) BS01 dna 2.7.7.7 GO:0000166 ... P14284 38720088
    887225 8tlq:A (3.53) BS02 dna 2.7.7.7 GO:0000166 ... P14284 38720088
    887226 8tlq:A (3.53) BS03 CA 2.7.7.7 GO:0000166 ... P14284 38720088
    887227 8tlq:A (3.53) BS04 DCP 2.7.7.7 GO:0000166 ... P14284 38720088
    887228 8tlq:A (3.53) BS05 SF4 2.7.7.7 GO:0000166 ... P14284 38720088
    887229 8tlq:B (3.53) BS01 dna 2.7.7.- GO:0000785 ... P12689 38720088
    887230 8tlq:B (3.53) BS02 dna 2.7.7.- GO:0000785 ... P12689 38720088
    887231 8tlr:A (1.70004) BS01 GDP N/A GO:0003924 ... P01112 39255801
    887232 8tlr:A (1.70004) BS02 MOV N/A GO:0003924 ... P01112 39255801
    887233 8tls:A (1.7) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    887234 8tls:B (1.7) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    887235 8tlt:A (2.85) BS01 dna 2.7.7.7 GO:0000166 ... P14284 38720088
    887236 8tlt:A (2.85) BS02 dna 2.7.7.7 GO:0000166 ... P14284 38720088
    887237 8tlt:A (2.85) BS03 SF4 2.7.7.7 GO:0000166 ... P14284 38720088
    887238 8tlt:A (2.85) BS04 CA 2.7.7.7 GO:0000166 ... P14284 38720088
    887239 8tlt:A (2.85) BS05 DCP 2.7.7.7 GO:0000166 ... P14284 38720088
    887240 8tlv:A (2.659) BS01 peptide ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887241 8tlv:A (2.659) BS02 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887242 8tlv:A (2.659) BS03 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887243 8tlw:A (2.106) BS01 peptide ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887244 8tlw:A (2.106) BS02 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887245 8tlw:A (2.106) BS03 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887246 8tlx:A (2.097) BS01 peptide ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887247 8tlx:A (2.097) BS02 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887248 8tlx:A (2.097) BS03 GLC ? GO:0005515 ... P0AEX9
    P42568
    38747396
    887249 8tm7:A (1.79) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 38352833
    887250 8tm7:A (1.79) BS02 I7Q 2.4.2.12 GO:0005125 ... P43490 38352833
    887251 8tm7:A (1.79) BS03 NCA 2.4.2.12 GO:0005125 ... P43490 38352833
    887252 8tm7:B (1.79) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 38352833
    887253 8tm7:B (1.79) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 38352833
    887254 8tm7:B (1.79) BS03 I7Q 2.4.2.12 GO:0005125 ... P43490 38352833
    887255 8tm9:A (2.05) BS01 peptide N/A N/A N/A N/A
    887256 8tm9:B (2.05) BS01 peptide N/A N/A N/A N/A
    887257 8tmb:E (3.6) BS01 MG N/A GO:0000287 ... Q9WZ31 N/A
    887258 8tmc:D (3.3) BS01 MG N/A GO:0000287 ... Q9WZ31 41701836
    887259 8tmc:E (3.3) BS01 MG N/A GO:0000287 ... Q9WZ31 41701836
    887260 8tml:B (3.4) BS01 MG N/A GO:0000287 ... Q9WZ31 41701836
    887261 8tmr:A (1.37) BS01 NXL 3.5.2.6 GO:0008800 ... A0A4Y5JTU1 38000656
    887262 8tmt:A (1.7) BS01 4D6 3.5.2.6 GO:0008800 ... A0A4Y5JTU1 38000656
    887263 8tmu:A (2.9) BS01 peptide N/A N/A A0A583ZBV1 40749828
    887264 8tmy:A (3.07) BS01 peptide N/A N/A N/A N/A
    887265 8tmy:B (3.07) BS01 peptide N/A N/A N/A N/A
    887266 8tmy:C (3.07) BS01 peptide N/A N/A N/A N/A
    887267 8tmy:D (3.07) BS01 peptide N/A N/A N/A N/A
    887268 8tmy:H (3.07) BS01 peptide N/A N/A N/A N/A
    887269 8tmy:L (3.07) BS01 peptide N/A N/A N/A N/A
    887270 8tmz:H (1.8) BS01 peptide N/A N/A N/A N/A
    887271 8tmz:L (1.8) BS01 peptide N/A N/A N/A N/A
    887272 8tn3:A (1.63) BS01 PMP ? GO:0009058 ... Q643B9 37890134
    887273 8tn3:B (1.63) BS01 PMP ? GO:0009058 ... Q643B9 37890134
    887274 8tn5:H (1.76) BS01 GCS N/A N/A N/A 39637855
    887275 8tn5:L (1.76) BS01 GCS N/A N/A N/A 39637855
    887276 8tn6:A (1.36) BS01 RPB N/A N/A N/A 38574125
    887277 8tn6:B (1.36) BS01 RPB N/A N/A N/A 38574125
    887278 8tn6:C (1.36) BS01 RPB N/A N/A N/A 38574125
    887279 8tn7:H (1.56) BS01 GCS N/A N/A N/A 39637855
    887280 8tn7:L (1.56) BS01 GCS N/A N/A N/A 39637855
    887281 8tnb:A (1.4) BS01 IQM N/A N/A N/A 38574125
    887282 8tnb:B (1.4) BS01 IQM N/A N/A N/A 38574125
    887283 8tnb:C (1.4) BS01 IQM N/A N/A N/A 38574125
    887284 8tnc:A (1.4) BS01 3JD N/A N/A N/A 38574125
    887285 8tnc:B (1.4) BS01 3JD N/A N/A N/A 38574125
    887286 8tnc:C (1.4) BS01 3JD N/A N/A N/A 38574125
    887287 8tnd:A (1.29) BS01 78P N/A N/A N/A 38574125
    887288 8tnd:B (1.29) BS01 78P N/A N/A N/A 38574125
    887289 8tnd:C (1.29) BS01 78P N/A N/A N/A 38574125
    887290 8tnk:A (1.79) BS01 IRJ ? GO:0004497 ... Q2IU02 37837941
    887291 8tnk:A (1.79) BS02 HEM ? GO:0004497 ... Q2IU02 37837941
    887292 8tnp:B (3.3) BS01 ZN ? GO:0005515 ... Q96SW2 38484051
    887293 8tnp:B (3.3) BS02 Y70 ? GO:0005515 ... Q96SW2 38484051
    887294 8tnp:C (3.3) BS01 Y70 ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887295 8tnp:C (3.3) BS02 ZN ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887296 8tnq:B (2.41) BS01 ZN ? GO:0005515 ... Q96SW2 38484051
    887297 8tnq:B (2.41) BS02 MIQ ? GO:0005515 ... Q96SW2 38484051
    887298 8tnq:C (2.41) BS01 MIQ ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887299 8tnq:C (2.41) BS02 ZN ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887300 8tnr:B (2.5) BS01 ZN ? GO:0005515 ... Q96SW2 38484051
    887301 8tnr:B (2.5) BS02 MIQ ? GO:0005515 ... Q96SW2 38484051
    887302 8tnr:C (2.5) BS01 MIQ ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887303 8tnr:C (2.5) BS02 ZN ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    887304 8tnv:A (1.5) BS01 CUO N/A GO:0016491 ... N/A 38513659
    887305 8tnv:B (1.5) BS01 CUO N/A GO:0016491 ... N/A 38513659
    887306 8tny:A (3.55) BS01 SO4 ? GO:0002062 ... P50443 38684689
    887307 8tny:B (3.55) BS01 SO4 ? GO:0002062 ... P50443 38684689
    887308 8to1:I (2.8) BS01 4QM N/A GO:0000345 ... P0A8V2 38951624
    887309 8to1:I (2.8) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    887310 8to1:J (2.8) BS01 dna N/A GO:0000287 ... P0A8T7 38951624
    887311 8to1:J (2.8) BS02 MG N/A GO:0000287 ... P0A8T7 38951624
    887312 8to1:J (2.8) BS03 ZN N/A GO:0000287 ... P0A8T7 38951624
    887313 8to1:J (2.8) BS04 ZN N/A GO:0000287 ... P0A8T7 38951624
    887314 8to1:L (2.8) BS01 dna N/A GO:0000976 ... P00579 38951624
    887315 8to1:L (2.8) BS02 dna N/A GO:0000976 ... P00579 38951624
    887316 8to2:B (2.0) BS01 45D ? GO:0005515 ... P74102 38578996
    887317 8to3:A (2.49) BS01 IXC N/A GO:0004672 ... P00533 39626019
    887318 8to3:B (2.49) BS01 MG N/A GO:0004672 ... P00533 39626019
    887319 8to3:B (2.49) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887320 8to3:C (2.49) BS01 MG N/A GO:0004672 ... P00533 39626019
    887321 8to3:C (2.49) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887322 8to3:D (2.49) BS01 MG N/A GO:0004672 ... P00533 39626019
    887323 8to3:D (2.49) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887324 8to4:A (2.99) BS01 MG N/A GO:0004672 ... P00533 39626019
    887325 8to4:A (2.99) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887326 8to4:B (2.99) BS01 MG N/A GO:0004672 ... P00533 39626019
    887327 8to4:B (2.99) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887328 8to4:C (2.99) BS01 MG N/A GO:0004672 ... P00533 39626019
    887329 8to4:C (2.99) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887330 8to4:C (2.99) BS03 IXR N/A GO:0004672 ... P00533 39626019
    887331 8to4:D (2.99) BS01 MG N/A GO:0004672 ... P00533 39626019
    887332 8to4:D (2.99) BS02 ANP N/A GO:0004672 ... P00533 39626019
    887333 8to4:D (2.99) BS03 IXR N/A GO:0004672 ... P00533 39626019
    887334 8to6:I (2.9) BS01 dna N/A GO:0000345 ... P0A8V2 38951624
    887335 8to6:I (2.9) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    887336 8to6:J (2.9) BS01 dna N/A GO:0000287 ... P0A8T7 38951624
    887337 8to6:J (2.9) BS02 dna N/A GO:0000287 ... P0A8T7 38951624
    887338 8to6:J (2.9) BS03 MG N/A GO:0000287 ... P0A8T7 38951624
    887339 8to6:J (2.9) BS04 ZN N/A GO:0000287 ... P0A8T7 38951624
    887340 8to6:J (2.9) BS05 ZN N/A GO:0000287 ... P0A8T7 38951624
    887341 8to6:L (2.9) BS01 dna N/A GO:0000976 ... P00579 38951624
    887342 8to6:L (2.9) BS02 dna N/A GO:0000976 ... P00579 38951624
    887343 8to8:I (2.9) BS01 4QM N/A GO:0000345 ... P0A8V2 38951624
    887344 8to8:I (2.9) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    887345 8to8:J (2.9) BS01 dna N/A GO:0000287 ... P0A8T7 38951624
    887346 8to8:J (2.9) BS02 MG N/A GO:0000287 ... P0A8T7 38951624
    887347 8to8:J (2.9) BS03 ZN N/A GO:0000287 ... P0A8T7 38951624
    887348 8to8:J (2.9) BS04 ZN N/A GO:0000287 ... P0A8T7 38951624
    887349 8to8:L (2.9) BS01 dna N/A GO:0000976 ... P00579 38951624
    887350 8to8:L (2.9) BS02 dna N/A GO:0000976 ... P00579 38951624
    887351 8to8:L (2.9) BS03 4QM N/A GO:0000976 ... P00579 38951624
    887352 8toc:AB (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887353 8toc:AF (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887354 8toc:AG (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887355 8toc:AI (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887356 8toc:AN (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887357 8toc:AO (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887358 8toc:AQ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887359 8toc:AT (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887360 8toc:AU (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887361 8toc:AV (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887362 8toc:AZ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887363 8toc:BF (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887364 8toc:BK (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887365 8toc:BO (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887366 8toc:BP (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887367 8toc:BS (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887368 8toc:BX (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887369 8toc:BZ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887370 8toc:Bc (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887371 8toc:CA (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887372 8toc:CB (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887373 8toc:CC (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887374 8toc:CG (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887375 8toc:CK (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887376 8toc:CN (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887377 8toc:CO (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887378 8toc:CQ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887379 8toc:CX (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887380 8toc:DA (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887381 8toc:DF (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887382 8toc:DH (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887383 8toc:DI (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887384 8toc:DJ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887385 8toc:DN (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887386 8toc:DO (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887387 8toc:DS (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887388 8toc:DT (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887389 8toc:DW (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887390 8toc:DY (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887391 8toc:DZ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887392 8toc:EA (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887393 8toc:EB (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887394 8toc:EC (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887395 8toc:ED (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887396 8toc:EE (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887397 8toc:EH (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887398 8toc:EI (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887399 8toc:EM (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443
    887400 8toc:EQ (3.11) BS01 rna ? GO:0019028 ... Q9AZ42 38553443

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).