SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    898001 8v4s:C (2.49) BS02 ZN N/A GO:0000287 ... Q64663 39107314
    898002 8v4s:C (2.49) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    898003 8v4u:A (1.819) BS01 YDL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38687966
    898004 8v4u:B (1.819) BS01 YDL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38687966
    898005 8v4v:A (2.95) BS01 BMX N/A GO:0003677 ... A0A0H2ZPE9 N/A
    898006 8v4v:B (2.95) BS01 BMX N/A GO:0003677 ... A0A0H2ZPE9 N/A
    898007 8v4v:B (2.95) BS02 BMX N/A GO:0003677 ... A0A0H2ZPE9 N/A
    898008 8v4x:A (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898009 8v4x:A (2.486) BS02 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898010 8v4x:A (2.486) BS03 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898011 8v4x:A (2.486) BS04 A1AAB 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898012 8v4x:B (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898013 8v4x:B (2.486) BS02 A1AAB 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898014 8v4x:C (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898015 8v4x:C (2.486) BS02 A1AAB 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898016 8v4x:D (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898017 8v4x:D (2.486) BS02 A1AAB 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898018 8v4x:E (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898019 8v4x:F (2.486) BS01 peptide 3.4.22.- GO:0004197 ... Q9UDY8 38507740
    898020 8v4y:A (2.8) BS01 dna ? GO:0000786 ... P84233 38472177
    898021 8v4y:A (2.8) BS02 dna ? GO:0000786 ... P84233 38472177
    898022 8v4y:B (2.8) BS01 dna ? GO:0000786 ... P62799 38472177
    898023 8v4y:B (2.8) BS02 dna ? GO:0000786 ... P62799 38472177
    898024 8v4y:C (2.8) BS01 dna ? GO:0000786 ... P06897 38472177
    898025 8v4y:C (2.8) BS02 dna ? GO:0000786 ... P06897 38472177
    898026 8v4y:D (2.8) BS01 dna ? GO:0000786 ... P02281 38472177
    898027 8v4y:D (2.8) BS02 dna ? GO:0000786 ... P02281 38472177
    898028 8v4y:E (2.8) BS01 dna ? GO:0000786 ... P84233 38472177
    898029 8v4y:E (2.8) BS02 dna ? GO:0000786 ... P84233 38472177
    898030 8v4y:F (2.8) BS01 dna ? GO:0000786 ... P62799 38472177
    898031 8v4y:G (2.8) BS01 dna ? GO:0000786 ... P06897 38472177
    898032 8v4y:G (2.8) BS02 dna ? GO:0000786 ... P06897 38472177
    898033 8v4y:H (2.8) BS01 dna ? GO:0000786 ... P02281 38472177
    898034 8v4y:H (2.8) BS02 dna ? GO:0000786 ... P02281 38472177
    898035 8v4y:W (2.8) BS01 dna 3.6.4.- GO:0000183 ... O60264 38472177
    898036 8v4y:W (2.8) BS02 dna 3.6.4.- GO:0000183 ... O60264 38472177
    898037 8v4y:W (2.8) BS03 ADP 3.6.4.- GO:0000183 ... O60264 38472177
    898038 8v4y:W (2.8) BS04 BEF 3.6.4.- GO:0000183 ... O60264 38472177
    898039 8v4z:A (2.4) BS01 peptide N/A N/A F4NBT2 39919196
    898040 8v4z:D (2.4) BS01 peptide N/A N/A N/A 39919196
    898041 8v4z:E (2.4) BS01 peptide N/A N/A N/A 39919196
    898042 8v4z:F (2.4) BS01 peptide N/A N/A F4NBT2 39919196
    898043 8v4z:I (2.4) BS01 peptide N/A N/A N/A 39919196
    898044 8v4z:J (2.4) BS01 peptide N/A N/A N/A 39919196
    898045 8v4z:K (2.4) BS01 peptide N/A N/A F4NBT2 39919196
    898046 8v4z:N (2.4) BS01 peptide N/A N/A N/A 39919196
    898047 8v4z:O (2.4) BS01 peptide N/A N/A N/A 39919196
    898048 8v4z:P (2.4) BS01 peptide N/A N/A F4NBT2 39919196
    898049 8v4z:S (2.4) BS01 peptide N/A N/A N/A 39919196
    898050 8v4z:T (2.4) BS01 peptide N/A N/A N/A 39919196
    898051 8v50:A (2.65002) BS01 peptide N/A GO:0000139 ... O19626 39919196
    898052 8v50:D (2.65002) BS01 peptide N/A N/A N/A 39919196
    898053 8v50:E (2.65002) BS01 peptide N/A N/A N/A 39919196
    898054 8v50:F (2.65002) BS01 peptide N/A GO:0000139 ... O19626 39919196
    898055 8v50:I (2.65002) BS01 peptide N/A N/A N/A 39919196
    898056 8v50:J (2.65002) BS01 peptide N/A N/A N/A 39919196
    898057 8v50:K (2.65002) BS01 peptide N/A GO:0000139 ... O19626 39919196
    898058 8v50:N (2.65002) BS01 peptide N/A N/A N/A 39919196
    898059 8v50:O (2.65002) BS01 peptide N/A N/A N/A 39919196
    898060 8v50:P (2.65002) BS01 peptide N/A GO:0000139 ... O19626 39919196
    898061 8v50:S (2.65002) BS01 peptide N/A N/A N/A 39919196
    898062 8v50:T (2.65002) BS01 peptide N/A N/A N/A 39919196
    898063 8v51:A (2.1) BS01 peptide N/A GO:0000139 ... O19626 39919196
    898064 8v51:D (2.1) BS01 peptide N/A N/A N/A 39919196
    898065 8v51:E (2.1) BS01 peptide N/A N/A N/A 39919196
    898066 8v53:A (4.1) BS01 dna N/A GO:0003690 ... P9WKD9 N/A
    898067 8v53:A (4.1) BS02 dna N/A GO:0003690 ... P9WKD9 N/A
    898068 8v53:B (4.1) BS01 dna N/A GO:0003690 ... P9WKD9 N/A
    898069 8v53:B (4.1) BS02 dna N/A GO:0003690 ... P9WKD9 N/A
    898070 8v54:A (4.1) BS01 dna N/A GO:0000262 ... P54098 38932681
    898071 8v54:A (4.1) BS02 dna N/A GO:0000262 ... P54098 38932681
    898072 8v55:A (4.2) BS01 dna N/A GO:0000262 ... P54098 38932681
    898073 8v55:A (4.2) BS02 dna N/A GO:0000262 ... P54098 38932681
    898074 8v57:A (2.75) BS01 SO4 N/A GO:0006508 ... P55097 38548090
    898075 8v57:A (2.75) BS02 SO4 N/A GO:0006508 ... P55097 38548090
    898076 8v57:B (2.75) BS01 SO4 N/A GO:0006508 ... P55097 38548090
    898077 8v57:B (2.75) BS02 SO4 N/A GO:0006508 ... P55097 38548090
    898078 8v57:B (2.75) BS03 SO4 N/A GO:0006508 ... P55097 38548090
    898079 8v57:C (2.75) BS01 SO4 N/A GO:0001540 ... P21460 38548090
    898080 8v58:A (3.1) BS01 SGN N/A GO:0006508 ... P55097 38548090
    898081 8v5b:A (1.98) BS01 FMN N/A GO:0003955 ... P38489 38928299
    898082 8v5b:A (1.98) BS02 FMN N/A GO:0003955 ... P38489 38928299
    898083 8v5b:B (1.98) BS01 FMN N/A GO:0003955 ... P38489 38928299
    898084 8v5b:B (1.98) BS02 FMN N/A GO:0003955 ... P38489 38928299
    898085 8v5b:C (1.98) BS01 FMN N/A GO:0003955 ... P38489 38928299
    898086 8v5b:C (1.98) BS02 FMN N/A GO:0003955 ... P38489 38928299
    898087 8v5b:C (1.98) BS03 P4K N/A GO:0003955 ... P38489 38928299
    898088 8v5b:D (1.98) BS01 FMN N/A GO:0003955 ... P38489 38928299
    898089 8v5b:D (1.98) BS02 FMN N/A GO:0003955 ... P38489 38928299
    898090 8v5c:B (1.96) BS01 DXC N/A N/A P18013 39079629
    898091 8v5c:B (1.96) BS02 DXC N/A N/A P18013 39079629
    898092 8v5e:A (2.2) BS01 DXC N/A N/A P18013 39079629
    898093 8v5g:A (2.5) BS01 YDO 6.2.1.1 GO:0003987 ... J9VFT1 40885291
    898094 8v5g:B (2.5) BS01 YDO 6.2.1.1 GO:0003987 ... J9VFT1 40885291
    898095 8v5h:A (2.74) BS01 A1AAE N/A GO:0004672 ... Q96GX5 39499084
    898096 8v5i:A (2.18) BS01 A1AAA N/A GO:0004672 ... O95819 39499084
    898097 8v5m:A (9.22) BS01 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898098 8v5m:A (9.22) BS02 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898099 8v5m:D (9.22) BS01 ZN 2.7.7.- GO:0003899 ... Q800A4 38491139
    898100 8v5n:A (8.56) BS01 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898101 8v5n:A (8.56) BS02 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898102 8v5n:D (8.56) BS01 ZN 2.7.7.- GO:0003899 ... Q800A4 38491139
    898103 8v5o:A (8.99) BS01 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898104 8v5o:A (8.99) BS02 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898105 8v5o:D (8.99) BS01 ZN 2.7.7.- GO:0003899 ... Q800A4 38491139
    898106 8v5r:A (3.0) BS01 dna N/A GO:0000262 ... P54098 38932681
    898107 8v5r:A (3.0) BS02 dna N/A GO:0000262 ... P54098 38932681
    898108 8v5r:A (3.0) BS03 MG N/A GO:0000262 ... P54098 38932681
    898109 8v5r:A (3.0) BS04 D3T N/A GO:0000262 ... P54098 38932681
    898110 8v5u:A (1.48) BS01 peptide N/A GO:0017136 ... Q9NTG7 N/A
    898111 8v5u:A (1.48) BS02 ZN N/A GO:0017136 ... Q9NTG7 N/A
    898112 8v5u:A (1.48) BS03 Y4T N/A GO:0017136 ... Q9NTG7 N/A
    898113 8v5y:A (2.059) BS01 peptide ? GO:0003779 ... A0A1B2YLJ4 38662449
    898114 8v5y:B (2.059) BS01 peptide ? GO:0003779 ... A0A1B2YLJ4 38662449
    898115 8v60:A (2.43) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898116 8v60:A (2.43) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898117 8v60:A (2.43) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898118 8v60:A (2.43) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898119 8v60:A (2.43) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898120 8v60:B (2.43) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898121 8v60:B (2.43) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898122 8v60:B (2.43) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898123 8v60:B (2.43) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898124 8v60:B (2.43) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898125 8v60:C (2.43) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898126 8v60:C (2.43) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898127 8v60:C (2.43) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898128 8v60:C (2.43) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898129 8v60:C (2.43) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898130 8v60:D (2.43) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898131 8v60:D (2.43) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898132 8v60:D (2.43) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898133 8v60:D (2.43) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898134 8v63:A (2.72) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898135 8v63:A (2.72) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898136 8v63:A (2.72) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898137 8v63:A (2.72) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898138 8v63:A (2.72) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898139 8v63:B (2.72) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898140 8v63:B (2.72) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898141 8v63:B (2.72) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898142 8v63:B (2.72) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898143 8v63:B (2.72) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898144 8v63:C (2.72) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898145 8v63:C (2.72) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898146 8v63:C (2.72) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898147 8v63:C (2.72) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898148 8v63:C (2.72) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898149 8v63:C (2.72) BS06 AJP N/A GO:0005216 ... Q12791 N/A
    898150 8v63:D (2.72) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898151 8v63:D (2.72) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898152 8v63:D (2.72) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898153 8v63:D (2.72) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898154 8v63:D (2.72) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898155 8v64:A (2.6) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898156 8v64:A (2.6) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898157 8v64:A (2.6) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898158 8v64:A (2.6) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898159 8v64:A (2.6) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898160 8v64:B (2.6) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898161 8v64:B (2.6) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898162 8v64:B (2.6) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898163 8v64:B (2.6) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898164 8v64:C (2.6) BS01 CLR N/A GO:0005216 ... Q12791 N/A
    898165 8v64:C (2.6) BS02 AJP N/A GO:0005216 ... Q12791 N/A
    898166 8v64:C (2.6) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898167 8v64:C (2.6) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898168 8v64:C (2.6) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898169 8v64:C (2.6) BS06 AJP N/A GO:0005216 ... Q12791 N/A
    898170 8v64:D (2.6) BS01 AJP N/A GO:0005216 ... Q12791 N/A
    898171 8v64:D (2.6) BS02 CLR N/A GO:0005216 ... Q12791 N/A
    898172 8v64:D (2.6) BS03 AJP N/A GO:0005216 ... Q12791 N/A
    898173 8v64:D (2.6) BS04 AJP N/A GO:0005216 ... Q12791 N/A
    898174 8v64:D (2.6) BS05 AJP N/A GO:0005216 ... Q12791 N/A
    898175 8v64:D (2.6) BS06 AJP N/A GO:0005216 ... Q12791 N/A
    898176 8v65:A (1.8) BS01 YGU N/A N/A A0A9X9ZA84 40274765
    898177 8v66:A (1.9) BS01 YGZ N/A N/A A0A9X9ZA84 40274765
    898178 8v67:A (1.9) BS01 YH9 N/A N/A A0A9X9ZA84 40274765
    898179 8v68:A (1.9) BS01 YGF N/A N/A A0A9X9ZA84 40274765
    898180 8v69:A (1.95) BS01 YGQ N/A N/A A0A9X9ZA84 40274765
    898181 8v6g:A (11.16) BS01 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898182 8v6g:A (11.16) BS02 rna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898183 8v6g:A (11.16) BS03 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898184 8v6g:A (11.16) BS04 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898185 8v6g:A (11.16) BS05 DGT 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898186 8v6g:A (11.16) BS06 MG 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898187 8v6g:C (11.16) BS01 dna ? GO:0003677 ... A0A1L8G3G3 38491139
    898188 8v6g:C (11.16) BS02 rna ? GO:0003677 ... A0A1L8G3G3 38491139
    898189 8v6g:C (11.16) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    898190 8v6g:D (11.16) BS01 ZN 2.7.7.- GO:0003899 ... Q800A4 38491139
    898191 8v6h:A (11.11) BS01 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898192 8v6h:A (11.11) BS02 rna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898193 8v6h:A (11.11) BS03 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898194 8v6h:A (11.11) BS04 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898195 8v6h:A (11.11) BS05 DGT 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898196 8v6h:A (11.11) BS06 MG 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    898197 8v6h:C (11.11) BS01 dna ? GO:0003677 ... A0A1L8G3G3 38491139
    898198 8v6h:C (11.11) BS02 rna ? GO:0003677 ... A0A1L8G3G3 38491139
    898199 8v6h:C (11.11) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    898200 8v6h:D (11.11) BS01 ZN 2.7.7.- GO:0003899 ... Q800A4 38491139

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).