SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    90001 2ibk:A (2.25) BS03 BAP 2.7.7.7 GO:0000287 ... Q97W02 17848527
    90002 2ibk:A (2.25) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 17848527
    90003 2ibk:A (2.25) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 17848527
    90004 2ibk:A (2.25) BS06 POP 2.7.7.7 GO:0000287 ... Q97W02 17848527
    90005 2ibm:A (3.2) BS01 ADP 7.4.2.8 GO:0005524 ... P28366 16989859
    90006 2ibn:A (1.5) BS01 FE 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90007 2ibn:A (1.5) BS02 FE 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90008 2ibn:A (1.5) BS03 I1N 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90009 2ibn:A (1.5) BS04 CYS 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90010 2ibn:B (1.5) BS01 FE 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90011 2ibn:B (1.5) BS02 FE 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90012 2ibn:B (1.5) BS03 I1N 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90013 2ibn:B (1.5) BS04 CYS 1.13.99.1 GO:0005506 ... Q9UGB7 18364358
    90014 2ibs:A (2.4) BS01 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90015 2ibs:A (2.4) BS02 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90016 2ibs:A (2.4) BS03 NEA 2.1.1.72 GO:0003676 ... P14385 17455934
    90017 2ibs:D (2.4) BS01 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90018 2ibs:D (2.4) BS02 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90019 2ibs:D (2.4) BS03 NEA 2.1.1.72 GO:0003676 ... P14385 17455934
    90020 2ibt:A (1.7) BS01 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90021 2ibt:A (1.7) BS02 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90022 2ibt:A (1.7) BS03 NEA 2.1.1.72 GO:0003676 ... P14385 17455934
    90023 2ibt:D (1.7) BS01 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90024 2ibt:D (1.7) BS02 dna 2.1.1.72 GO:0003676 ... P14385 17455934
    90025 2ibt:D (1.7) BS03 NEA 2.1.1.72 GO:0003676 ... P14385 17455934
    90026 2ibu:A (1.9) BS01 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90027 2ibu:B (1.9) BS01 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90028 2ibu:C (1.9) BS01 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90029 2ibu:D (1.9) BS01 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90030 2ibw:A (1.9) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90031 2ibw:A (1.9) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90032 2ibw:B (1.9) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90033 2ibw:B (1.9) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90034 2ibw:C (1.9) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90035 2ibw:C (1.9) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90036 2ibw:D (1.9) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90037 2ibw:D (1.9) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90038 2iby:A (1.85) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90039 2iby:A (1.85) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90040 2iby:B (1.85) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90041 2iby:B (1.85) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90042 2iby:C (1.85) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90043 2iby:C (1.85) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90044 2iby:D (1.85) BS01 K 2.3.1.9 GO:0001889 ... P24752 17371050
    90045 2iby:D (1.85) BS02 COA 2.3.1.9 GO:0001889 ... P24752 17371050
    90046 2ibz:C (2.3) BS01 HEC 7.1.1.8 GO:0005739 ... P00163 17337272
    90047 2ibz:C (2.3) BS02 HEC 7.1.1.8 GO:0005739 ... P00163 17337272
    90048 2ibz:C (2.3) BS03 UQ6 7.1.1.8 GO:0005739 ... P00163 17337272
    90049 2ibz:C (2.3) BS04 SMA 7.1.1.8 GO:0005739 ... P00163 17337272
    90050 2ibz:D (2.3) BS01 HEC 7.1.1.8 GO:0009055 ... P07143 17337272
    90051 2ibz:E (2.3) BS01 FES 7.1.1.8 GO:0008121 ... P08067 17337272
    90052 2ic0:A (1.78) BS01 AZA 1.7.3.3 GO:0004846 ... Q00511 17028130
    90053 2ic1:A (2.7) BS01 FE2 1.13.11.20 GO:0005506 ... Q16878 17135237
    90054 2ic1:A (2.7) BS02 CYS 1.13.11.20 GO:0005506 ... Q16878 17135237
    90055 2ic1:A (2.7) BS03 CYS 1.13.11.20 GO:0005506 ... Q16878 17135237
    90056 2ic3:A (3.0) BS01 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 17056061
    90057 2ic3:A (3.0) BS02 HBY 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 17056061
    90058 2ic5:A (1.9) BS01 GNP 3.6.5.2 GO:0003924 ... P60763 N/A
    90059 2ic5:B (1.9) BS01 GDP 3.6.5.2 GO:0003924 ... P60763 N/A
    90060 2ica:A (1.56) BS01 2IC ? N/A P20701 17125246 MOAD: ic50=20nM
    BindingDB: IC50=20nM
    90061 2ice:A (3.1) BS01 CA ? GO:0004866 ... P01024 17051150
    90062 2ice:D (3.1) BS01 CA ? GO:0004866 ... P01024 17051150
    90063 2icf:A (4.1) BS01 CA ? GO:0004866 ... P01024 17051150
    90064 2ici:A (1.56) BS01 MG ? GO:0005576 ... Q1CQP3 17303163
    90065 2icj:A (1.7) BS01 MG 5.3.3.2 GO:0004452 ... Q13907 17250851
    90066 2ick:A (1.93) BS01 MN 5.3.3.2 GO:0004452 ... Q13907 17250851
    90067 2ick:A (1.93) BS02 DMA 5.3.3.2 GO:0004452 ... Q13907 17250851
    90068 2icp:A (1.88) BS01 MG ? GO:0003677 ... P67700 N/A
    90069 2icq:A (1.75) BS01 AZA 1.7.3.3 GO:0004846 ... Q00511 17028130
    90070 2icq:A (1.75) BS02 CYS 1.7.3.3 GO:0004846 ... Q00511 17028130
    90071 2icq:A (1.75) BS03 N2O 1.7.3.3 GO:0004846 ... Q00511 17028130
    90072 2ics:A (2.3) BS01 ZN 3.1.1.- GO:0016810 ... Q837K0 N/A
    90073 2ics:A (2.3) BS02 ZN 3.1.1.- GO:0016810 ... Q837K0 N/A
    90074 2ics:A (2.3) BS03 ADE 3.1.1.- GO:0016810 ... Q837K0 N/A
    90075 2icv:A (1.6) BS01 CO 1.11.1.5 GO:0004601 ... P00431 17021923
    90076 2icv:A (1.6) BS02 HEM 1.11.1.5 GO:0004601 ... P00431 17021923
    90077 2icw:A (2.41) BS01 peptide ? GO:0006955 ... P01903 17220897
    90078 2icw:B (2.41) BS01 peptide ? GO:0006955 ... P01911 17220897
    90079 2icw:D (2.41) BS01 peptide ? GO:0006955 ... P01903 17220897
    90080 2icw:E (2.41) BS01 peptide ? GO:0006955 ... P01911 17220897
    90081 2icw:G (2.41) BS01 peptide ? N/A Q48898 17220897
    90082 2icw:H (2.41) BS01 peptide ? N/A Q48898 17220897
    90083 2icx:A (1.85) BS01 UTP 2.7.7.9 GO:0003983 ... Q9M9P3 17178129
    90084 2icx:B (1.85) BS01 UTP 2.7.7.9 GO:0003983 ... Q9M9P3 17178129
    90085 2icy:A (1.64) BS01 UPG 2.7.7.9 GO:0003983 ... Q9M9P3 17178129
    90086 2icy:B (1.64) BS01 UPG 2.7.7.9 GO:0003983 ... Q9M9P3 17178129
    90087 2id0:A (2.35) BS01 MN 3.1.13.1 GO:0003676 ... P30850 16996291
    90088 2id0:B (2.35) BS01 MN 3.1.13.1 GO:0003676 ... P30850 16996291
    90089 2id0:C (2.35) BS01 MN 3.1.13.1 GO:0003676 ... P30850 16996291
    90090 2id0:D (2.35) BS01 MN 3.1.13.1 GO:0003676 ... P30850 16996291
    90091 2id2:A (2.5) BS01 NAP 1.2.1.9 GO:0008886 ... Q59931 16958622
    90092 2id2:B (2.5) BS01 NAP 1.2.1.9 GO:0008886 ... Q59931 16958622
    90093 2id2:C (2.5) BS01 NAP 1.2.1.9 GO:0008886 ... Q59931 16958622
    90094 2id2:D (2.5) BS01 NAP 1.2.1.9 GO:0008886 ... Q59931 16958622
    90095 2id3:A (1.7) BS01 CA ? GO:0000976 ... O54180 N/A
    90096 2id4:A (1.9) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 17426142
    90097 2id4:A (1.9) BS02 peptide 3.4.21.61 GO:0004252 ... P13134 17426142
    90098 2id4:A (1.9) BS03 CA 3.4.21.61 GO:0004252 ... P13134 17426142
    90099 2id4:A (1.9) BS04 CA 3.4.21.61 GO:0004252 ... P13134 17426142
    90100 2id4:B (1.9) BS01 peptide 3.4.21.61 GO:0004252 ... P13134 17426142
    90101 2id4:B (1.9) BS02 CA 3.4.21.61 GO:0004252 ... P13134 17426142
    90102 2id4:B (1.9) BS03 CA 3.4.21.61 GO:0004252 ... P13134 17426142
    90103 2id8:A (1.27) BS01 CA 3.4.21.64 GO:0004252 ... P06873 17139083
    90104 2id8:A (1.27) BS02 2DB 3.4.21.64 GO:0004252 ... P06873 17139083
    90105 2ida:A (-1.00) BS01 ZN ? GO:0008270 ... Q6NA67 N/A
    90106 2ida:A (-1.00) BS02 ZN ? GO:0008270 ... Q6NA67 N/A
    90107 2idf:A (2.25) BS01 CU ? GO:0005507 ... P00282 N/A
    90108 2idf:B (2.25) BS01 CU ? GO:0005507 ... P00282 N/A
    90109 2idk:A (2.55) BS01 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90110 2idk:B (2.55) BS01 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90111 2idk:B (2.55) BS02 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90112 2idk:C (2.55) BS01 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90113 2idk:C (2.55) BS02 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90114 2idk:D (2.55) BS01 C2F 2.1.1.20 GO:0005542 ... P13255 17158459
    90115 2ido:A (2.1) BS01 MN 2.7.7.7 GO:0003676 ... P03007 16973612
    90116 2ido:A (2.1) BS02 TMP 2.7.7.7 GO:0003676 ... P03007 16973612
    90117 2ido:C (2.1) BS01 MN 2.7.7.7 GO:0003676 ... P03007 16973612
    90118 2ido:C (2.1) BS02 TMP 2.7.7.7 GO:0003676 ... P03007 16973612
    90119 2idq:A (0.9) BS01 CU ? GO:0005507 ... P22364 17295442
    90120 2ids:A (1.0) BS01 CU1 ? GO:0005507 ... P22364 17295442
    90121 2idt:A (1.0) BS01 CU ? GO:0005507 ... P22364 17295442
    90122 2idu:A (0.95) BS01 CU1 ? GO:0005507 ... P22364 17295442
    90123 2idv:A (2.3) BS01 M7G ? GO:0003723 ... P29557 17322339
    90124 2idw:A (1.1) BS01 017 3.4.23.16 GO:0004190 ... P03366 15066436
    90125 2idw:B (1.1) BS01 017 3.4.23.16 GO:0004190 ... P03366 15066436 MOAD: Ki=1.3nM
    90126 2idx:A (2.5) BS01 ATP 2.5.1.- N/A Q96EY8 17176040
    90127 2idx:B (2.5) BS01 ATP 2.5.1.- N/A Q96EY8 17176040
    90128 2idx:C (2.5) BS01 ATP 2.5.1.- N/A Q96EY8 17176040
    90129 2idx:C (2.5) BS02 ATP 2.5.1.- N/A Q96EY8 17176040
    90130 2idz:A (2.0) BS01 ZID 1.3.1.9 GO:0004318 ... P9WGR1 17588773 MOAD: Kd<0.4nM
    90131 2ie0:A (2.2) BS01 ZID 1.3.1.9 GO:0004318 ... P9WGR1 17588773
    90132 2ie3:C (2.8) BS01 peptide 3.1.3.16 GO:0000159 ... P67775 17055435
    90133 2ie3:C (2.8) BS02 MN 3.1.3.16 GO:0000159 ... P67775 17055435
    90134 2ie3:C (2.8) BS03 MN 3.1.3.16 GO:0000159 ... P67775 17055435
    90135 2ie4:C (2.6) BS01 MN 3.1.3.16 GO:0000159 ... P67775 17055435
    90136 2ie4:C (2.6) BS02 MN 3.1.3.16 GO:0000159 ... P67775 17055435
    90137 2ie4:C (2.6) BS03 OKA 3.1.3.16 GO:0000159 ... P67775 17055435 BindingDB: IC50=7nM
    90138 2ie6:A (1.83) BS01 CA ? GO:0001786 ... P14668 17028130
    90139 2ie6:A (1.83) BS02 CA ? GO:0001786 ... P14668 17028130
    90140 2ie6:A (1.83) BS03 CA ? GO:0001786 ... P14668 17028130
    90141 2ie6:A (1.83) BS04 CA ? GO:0001786 ... P14668 17028130
    90142 2ie6:A (1.83) BS05 CA ? GO:0001786 ... P14668 17028130
    90143 2ie6:A (1.83) BS06 CA ? GO:0001786 ... P14668 17028130
    90144 2ie6:A (1.83) BS07 XE ? GO:0001786 ... P14668 17028130
    90145 2ie7:A (1.75) BS01 CA ? GO:0001786 ... P14668 17028130
    90146 2ie7:A (1.75) BS02 CA ? GO:0001786 ... P14668 17028130
    90147 2ie7:A (1.75) BS03 CA ? GO:0001786 ... P14668 17028130
    90148 2ie7:A (1.75) BS04 CA ? GO:0001786 ... P14668 17028130
    90149 2ie7:A (1.75) BS05 CA ? GO:0001786 ... P14668 17028130
    90150 2ie7:A (1.75) BS06 CA ? GO:0001786 ... P14668 17028130
    90151 2ie7:A (1.75) BS07 CA ? GO:0001786 ... P14668 17028130
    90152 2ie7:A (1.75) BS08 N2O ? GO:0001786 ... P14668 17028130
    90153 2ie7:A (1.75) BS09 N2O ? GO:0001786 ... P14668 17028130
    90154 2iea:A (1.85) BS01 MG 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90155 2iea:A (1.85) BS02 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90156 2iea:A (1.85) BS03 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90157 2iea:B (1.85) BS01 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90158 2iea:B (1.85) BS02 MG 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90159 2iea:B (1.85) BS03 TPP 1.2.4.1 GO:0000287 ... P0AFG8 11955070
    90160 2ieb:A (2.2) BS01 ZID 1.3.1.9 GO:0004318 ... P9WGR1 17588773
    90161 2ief:A (2.601) BS01 dna ? GO:0003677 ... P03699 17287355
    90162 2ief:A (2.601) BS02 dna ? GO:0003677 ... P03699 17287355
    90163 2ief:B (2.601) BS01 dna ? GO:0003677 ... P03699 17287355
    90164 2ief:B (2.601) BS02 dna ? GO:0003677 ... P03699 17287355
    90165 2ief:B (2.601) BS03 dna ? GO:0003677 ... P03699 17287355
    90166 2ief:C (2.601) BS01 dna ? GO:0003677 ... P03699 17287355
    90167 2ief:C (2.601) BS02 dna ? GO:0003677 ... P03699 17287355
    90168 2ieg:A (1.9) BS01 PLR 2.4.1.1 GO:0004645 ... P00489 17095214
    90169 2ieg:A (1.9) BS02 FRY 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.135uM
    90170 2ieg:A (1.9) BS03 FRY 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.135uM
    90171 2ieg:B (1.9) BS01 FRY 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.135uM
    90172 2ieg:B (1.9) BS02 PLR 2.4.1.1 GO:0004645 ... P00489 17095214
    90173 2ieg:B (1.9) BS03 FRY 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.135uM
    90174 2ieh:A (2.7) BS01 ADP 3.6.4.4 GO:0003777 ... P52732 17251189
    90175 2ieh:A (2.7) BS02 MOY 3.6.4.4 GO:0003777 ... P52732 17251189 BindingDB: IC50=150nM
    90176 2ieh:B (2.7) BS01 ADP 3.6.4.4 GO:0003777 ... P52732 17251189
    90177 2ieh:B (2.7) BS02 MOY 3.6.4.4 GO:0003777 ... P52732 17251189 BindingDB: IC50=150nM
    90178 2iei:A (1.91) BS01 PLR 2.4.1.1 GO:0004645 ... P00489 17095214
    90179 2iei:A (1.91) BS02 FRX 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.121uM
    90180 2iei:A (1.91) BS03 FRX 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.121uM
    90181 2iei:B (1.91) BS01 FRX 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.121uM
    90182 2iei:B (1.91) BS02 PLR 2.4.1.1 GO:0004645 ... P00489 17095214
    90183 2iei:B (1.91) BS03 FRX 2.4.1.1 GO:0004645 ... P00489 17095214 MOAD: ic50=0.121uM
    90184 2iej:A (1.8) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 17208314
    90185 2iej:A (1.8) BS02 S48 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 17208314
    90186 2iej:B (1.8) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 17208314
    90187 2iej:B (1.8) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 17208314
    90188 2iej:B (1.8) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 17208314
    90189 2iej:B (1.8) BS04 S48 2.5.1.58 GO:0003824 ... P49356 17208314
    90190 2iej:B (1.8) BS05 FII 2.5.1.58 GO:0003824 ... P49356 17208314
    90191 2ien:A (1.3) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 15066436
    90192 2ien:B (1.3) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 15066436 MOAD: Ki=1nM
    90193 2ieo:A (1.53) BS01 017 3.4.23.16 GO:0004190 ... P03366 15066436 MOAD: Ki=3.2nM
    90194 2ieo:B (1.53) BS01 017 3.4.23.16 GO:0004190 ... P03366 15066436
    90195 2iep:A (2.205) BS01 SO4 2.7.10.1 N/A Q62838 17011580
    90196 2iep:B (2.205) BS01 SO4 2.7.10.1 N/A Q62838 17011580
    90197 2ier:A (2.7) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 17176043
    90198 2ier:A (2.7) BS02 ZN 3.5.1.108 GO:0005737 ... O67648 17176043
    90199 2ier:A (2.7) BS03 ZN 3.5.1.108 GO:0005737 ... O67648 17176043
    90200 2ier:A (2.7) BS04 ZN 3.5.1.108 GO:0005737 ... O67648 17176043

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).