SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    907001 8w5z:A (1.55) BS06 1PS 2.8.2.20 GO:0006478 ... B7Q097 38354785
    907002 8w5z:C (1.55) BS01 peptide 2.8.2.20 GO:0006478 ... B7Q097 38354785
    907003 8w5z:C (1.55) BS02 peptide 2.8.2.20 GO:0006478 ... B7Q097 38354785
    907004 8w5z:C (1.55) BS03 A3P 2.8.2.20 GO:0006478 ... B7Q097 38354785
    907005 8w69:A (3.6) BS01 peptide N/A GO:0004252 ... P39099 38351715
    907006 8w69:B (3.6) BS01 peptide N/A GO:0004252 ... P39099 38351715
    907007 8w69:C (3.6) BS01 peptide N/A GO:0004252 ... P39099 38351715
    907008 8w6a:A (1.53) BS01 peptide N/A GO:0000045 ... O95166 38437556
    907009 8w6a:B (1.53) BS01 peptide N/A GO:0000045 ... O95166 38437556
    907010 8w6a:D (1.53) BS01 peptide N/A GO:0000045 ... O95166 38437556
    907011 8w6a:G (1.53) BS01 peptide N/A GO:0000045 ... O95166 38437556
    907012 8w6a:G (1.53) BS02 peptide N/A GO:0000045 ... O95166 38437556
    907013 8w6c:A (2.7) BS01 NA ? GO:0005515 ... Q13183 38552027
    907014 8w6c:A (2.7) BS02 NA ? GO:0005515 ... Q13183 38552027
    907015 8w6c:A (2.7) BS03 Y01 ? GO:0005515 ... Q13183 38552027
    907016 8w6c:B (2.7) BS01 Y01 ? GO:0005515 ... Q13183 38552027
    907017 8w6c:B (2.7) BS02 Y01 ? GO:0005515 ... Q13183 38552027
    907018 8w6c:B (2.7) BS03 NA ? GO:0005515 ... Q13183 38552027
    907019 8w6c:B (2.7) BS04 NA ? GO:0005515 ... Q13183 38552027
    907020 8w6d:A (2.5) BS01 NA ? GO:0005515 ... Q13183 38552027
    907021 8w6d:A (2.5) BS02 Y01 ? GO:0005515 ... Q13183 38552027
    907022 8w6d:B (2.5) BS01 NA ? GO:0005515 ... Q13183 38552027
    907023 8w6d:B (2.5) BS02 Y01 ? GO:0005515 ... Q13183 38552027
    907024 8w6e:A (2.1) BS01 KY6 N/A N/A N/A 39972138
    907025 8w6e:B (2.1) BS01 KY6 N/A N/A N/A 39972138
    907026 8w6g:A (3.3) BS01 VIJ ? GO:0005515 ... Q13183 38552027
    907027 8w6g:A (3.3) BS02 Y01 ? GO:0005515 ... Q13183 38552027
    907028 8w6g:B (3.3) BS01 VIJ ? GO:0005515 ... Q13183 38552027
    907029 8w6g:B (3.3) BS02 Y01 ? GO:0005515 ... Q13183 38552027
    907030 8w6h:A (3.1) BS01 SO4 ? GO:0005886 ... Q9BZW2 38552027
    907031 8w6h:A (3.1) BS02 NA ? GO:0005886 ... Q9BZW2 38552027
    907032 8w6h:A (3.1) BS03 CLR ? GO:0005886 ... Q9BZW2 38552027
    907033 8w6h:B (3.1) BS01 SO4 ? GO:0005886 ... Q9BZW2 38552027
    907034 8w6h:B (3.1) BS02 NA ? GO:0005886 ... Q9BZW2 38552027
    907035 8w6h:B (3.1) BS03 CLR ? GO:0005886 ... Q9BZW2 38552027
    907036 8w6i:B (3.7) BS01 AGS ? GO:0000917 ... P0A9R7 N/A
    907037 8w6i:B (3.7) BS02 AGS ? GO:0000917 ... P0A9R7 N/A
    907038 8w6i:D (3.7) BS01 AGS ? GO:0000917 ... P0A9R7 N/A
    907039 8w6i:D (3.7) BS02 AGS ? GO:0000917 ... P0A9R7 N/A
    907040 8w6j:B (3.4) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    907041 8w6j:B (3.4) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    907042 8w6j:D (3.4) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    907043 8w6j:D (3.4) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    907044 8w6l:A (2.03) BS01 peptide N/A N/A B1A9P1 N/A
    907045 8w6m:A (2.501) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907046 8w6n:A (3.2) BS01 NA ? GO:0005886 ... Q9BZW2 38552027
    907047 8w6n:B (3.2) BS01 SO4 ? GO:0005886 ... Q9BZW2 38552027
    907048 8w6o:A (2.9) BS01 NA ? GO:0005886 ... Q9BZW2 38552027
    907049 8w6o:A (2.9) BS02 NA ? GO:0005886 ... Q9BZW2 38552027
    907050 8w6o:A (2.9) BS03 CLR ? GO:0005886 ... Q9BZW2 38552027
    907051 8w6o:B (2.9) BS01 NA ? GO:0005886 ... Q9BZW2 38552027
    907052 8w6o:B (2.9) BS02 NA ? GO:0005886 ... Q9BZW2 38552027
    907053 8w6o:B (2.9) BS03 CLR ? GO:0005886 ... Q9BZW2 38552027
    907054 8w6p:A (1.91) BS01 FUC 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907055 8w6p:A (1.91) BS02 YA4 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907056 8w6p:A (1.91) BS03 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907057 8w6p:A (1.91) BS04 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907058 8w6p:B (1.91) BS01 PO4 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907059 8w6p:B (1.91) BS02 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907060 8w6p:B (1.91) BS03 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907061 8w6q:A (2.101) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907062 8w6q:A (2.101) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907063 8w6q:A (2.101) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907064 8w6q:A (2.101) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862
    907065 8w6q:A (2.101) BS05 FE N/A GO:0008199 ... A0A084EX36 38641862
    907066 8w6q:A (2.101) BS06 FE N/A GO:0008199 ... A0A084EX36 38641862
    907067 8w6q:A (2.101) BS07 FE N/A GO:0008199 ... A0A084EX36 38641862
    907068 8w6q:A (2.101) BS08 FE N/A GO:0008199 ... A0A084EX36 38641862
    907069 8w6q:A (2.101) BS09 FE N/A GO:0008199 ... A0A084EX36 38641862
    907070 8w6r:A (1.95) BS01 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907071 8w6r:A (1.95) BS02 ZN 3.1.4.-
    3.6.1.15
    GO:0004767 ... P70158 37890481
    907072 8w6s:A (2.099) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907073 8w6s:A (2.099) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907074 8w6s:A (2.099) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907075 8w6s:A (2.099) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862
    907076 8w6s:A (2.099) BS05 FE N/A GO:0008199 ... A0A084EX36 38641862
    907077 8w6s:A (2.099) BS06 FE N/A GO:0008199 ... A0A084EX36 38641862
    907078 8w6u:A (2.099) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907079 8w6u:A (2.099) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907080 8w6u:A (2.099) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907081 8w6u:A (2.099) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862
    907082 8w6u:A (2.099) BS05 FE N/A GO:0008199 ... A0A084EX36 38641862
    907083 8w6u:A (2.099) BS06 FE N/A GO:0008199 ... A0A084EX36 38641862
    907084 8w6u:A (2.099) BS07 FE N/A GO:0008199 ... A0A084EX36 38641862
    907085 8w6u:A (2.099) BS08 FE N/A GO:0008199 ... A0A084EX36 38641862
    907086 8w6v:A (1.8) BS01 MG 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907087 8w6v:B (1.8) BS01 MG 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907088 8w6x:L (1.04) BS01 NFU 1.12.2.1 GO:0042597 ... P21852 37712026
    907089 8w6x:L (1.04) BS02 MG 1.12.2.1 GO:0042597 ... P21852 37712026
    907090 8w6x:L (1.04) BS03 SF4 1.12.2.1 GO:0042597 ... P21852 37712026
    907091 8w6x:S (1.04) BS01 SF4 1.12.2.1 GO:0009055 ... P21853 37712026
    907092 8w6x:S (1.04) BS02 SF4 1.12.2.1 GO:0009055 ... P21853 37712026
    907093 8w6x:S (1.04) BS03 F3S 1.12.2.1 GO:0009055 ... P21853 37712026
    907094 8w6y:A (2.502) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907095 8w6y:A (2.502) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907096 8w6y:A (2.502) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907097 8w6z:A (2.2) BS01 peptide N/A GO:0004497 ... A0AAT8XUJ3 38842938
    907098 8w6z:A (2.2) BS02 HEM N/A GO:0004497 ... A0AAT8XUJ3 38842938
    907099 8w6z:A (2.2) BS03 R8L N/A GO:0004497 ... A0AAT8XUJ3 38842938
    907100 8w71:A (2.121) BS01 ISJ 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907101 8w71:A (2.121) BS02 MG 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907102 8w71:B (2.121) BS01 ISJ 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907103 8w71:B (2.121) BS02 MG 5.4.4.2 GO:0008909 ... Q9S7H8 38701037
    907104 8w72:A (3.25) BS01 HEM N/A GO:0004497 ... A0AAT8XUJ3 38842938
    907105 8w73:A (2.601) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907106 8w73:A (2.601) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907107 8w73:A (2.601) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907108 8w74:A (2.5) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907109 8w74:A (2.5) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907110 8w74:A (2.5) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907111 8w74:A (2.5) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862
    907112 8w75:A (2.85) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907113 8w75:B (2.85) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907114 8w75:C (2.85) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907115 8w75:D (2.85) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907116 8w78:A (2.81) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907117 8w78:A (2.81) BS02 AKG 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907118 8w78:B (2.81) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907119 8w78:B (2.81) BS02 AKG 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907120 8w78:C (2.81) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907121 8w78:C (2.81) BS02 AKG 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907122 8w78:D (2.81) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907123 8w78:D (2.81) BS02 AKG 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907124 8w79:A (2.697) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907125 8w79:A (2.697) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907126 8w79:A (2.697) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907127 8w7a:B (3.77) BS01 GTP N/A GO:0004672 ... A0A0H2ZMF7 39154050
    907128 8w7b:A (2.7) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907129 8w7b:A (2.7) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907130 8w7b:A (2.7) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907131 8w7b:A (2.7) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862
    907132 8w7b:A (2.7) BS05 FE N/A GO:0008199 ... A0A084EX36 38641862
    907133 8w7c:A (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907134 8w7c:A (3.0) BS02 R89 N/A GO:0004176 ... Q16740 N/A
    907135 8w7c:B (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907136 8w7c:C (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907137 8w7c:C (3.0) BS02 R89 N/A GO:0004176 ... Q16740 N/A
    907138 8w7c:D (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907139 8w7c:D (3.0) BS02 R89 N/A GO:0004176 ... Q16740 N/A
    907140 8w7c:E (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907141 8w7c:F (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907142 8w7c:F (3.0) BS02 R89 N/A GO:0004176 ... Q16740 N/A
    907143 8w7c:G (3.0) BS01 R89 N/A GO:0004176 ... Q16740 N/A
    907144 8w7c:G (3.0) BS02 R89 N/A GO:0004176 ... Q16740 N/A
    907145 8w7d:A (2.81) BS01 7TG 2.4.2.14 GO:0000287 ... P0AG16 38051581
    907146 8w7d:B (2.81) BS01 7TG 2.4.2.14 GO:0000287 ... P0AG16 38051581
    907147 8w7d:C (2.81) BS01 7TG 2.4.2.14 GO:0000287 ... P0AG16 38051581
    907148 8w7d:D (2.81) BS01 7TG 2.4.2.14 GO:0000287 ... P0AG16 38051581
    907149 8w7e:A (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907150 8w7e:A (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907151 8w7e:B (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907152 8w7e:B (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907153 8w7e:C (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907154 8w7e:D (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907155 8w7e:D (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907156 8w7e:E (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907157 8w7e:E (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907158 8w7e:F (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907159 8w7e:F (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907160 8w7e:G (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907161 8w7e:G (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907162 8w7e:H (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907163 8w7e:H (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907164 8w7e:I (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907165 8w7e:I (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907166 8w7e:J (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907167 8w7e:K (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907168 8w7e:K (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907169 8w7e:L (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907170 8w7e:M (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907171 8w7e:M (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907172 8w7e:N (2.8) BS01 9I3 N/A GO:0004176 ... Q16740 N/A
    907173 8w7e:N (2.8) BS02 9I3 N/A GO:0004176 ... Q16740 N/A
    907174 8w7f:A (2.299) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907175 8w7f:B (2.299) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907176 8w7f:C (2.299) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907177 8w7f:D (2.299) BS01 FAD 1.1.99.2 GO:0005739 ... Q9VJ28 37995940
    907178 8w7g:A (1.8) BS01 HEM N/A GO:0004497 ... A0A1H5RFX8 N/A
    907179 8w7h:A (1.85) BS01 XUH 2.4.2.1
    2.4.2.44
    GO:0003824 ... Q8I3X4 38141766
    907180 8w7j:A (3.98) BS01 GTP N/A GO:0004672 ... A0A0H2ZMF7 39154050
    907181 8w7m:2 (4.12) BS01 ADP 3.6.4.12 GO:0000727 ... P29469 37730685
    907182 8w7m:2 (4.12) BS02 ZN 3.6.4.12 GO:0000727 ... P29469 37730685
    907183 8w7m:3 (4.12) BS01 dna 3.6.4.12 GO:0000727 ... P24279 37730685
    907184 8w7m:3 (4.12) BS02 ADP 3.6.4.12 GO:0000727 ... P24279 37730685
    907185 8w7m:3 (4.12) BS03 AGS 3.6.4.12 GO:0000727 ... P24279 37730685
    907186 8w7m:4 (4.12) BS01 dna 3.6.4.12 GO:0000727 ... P30665 37730685
    907187 8w7m:4 (4.12) BS02 AGS 3.6.4.12 GO:0000727 ... P30665 37730685
    907188 8w7m:4 (4.12) BS03 ZN 3.6.4.12 GO:0000727 ... P30665 37730685
    907189 8w7m:5 (4.12) BS01 ADP 3.6.4.12 GO:0000727 ... P29496 37730685
    907190 8w7m:5 (4.12) BS02 ZN 3.6.4.12 GO:0000727 ... P29496 37730685
    907191 8w7m:6 (4.12) BS01 ADP 3.6.4.12 GO:0000727 ... P53091 37730685
    907192 8w7m:6 (4.12) BS02 ZN 3.6.4.12 GO:0000727 ... P53091 37730685
    907193 8w7m:7 (4.12) BS01 dna 3.6.4.12 GO:0000727 ... P38132 37730685
    907194 8w7m:7 (4.12) BS02 AGS 3.6.4.12 GO:0000727 ... P38132 37730685
    907195 8w7m:7 (4.12) BS03 AGS 3.6.4.12 GO:0000727 ... P38132 37730685
    907196 8w7m:7 (4.12) BS04 ZN 3.6.4.12 GO:0000727 ... P38132 37730685
    907197 8w7o:A (2.399) BS01 FE N/A GO:0008199 ... A0A084EX36 38641862
    907198 8w7o:A (2.399) BS02 FE N/A GO:0008199 ... A0A084EX36 38641862
    907199 8w7o:A (2.399) BS03 FE N/A GO:0008199 ... A0A084EX36 38641862
    907200 8w7o:A (2.399) BS04 FE N/A GO:0008199 ... A0A084EX36 38641862

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).