SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    945801 9c1j:T (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945802 9c1j:T (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945803 9c1j:T (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945804 9c1j:U (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945805 9c1j:U (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945806 9c1j:U (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945807 9c1j:U (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945808 9c1j:V (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945809 9c1j:V (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945810 9c1j:V (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945811 9c1j:V (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945812 9c1j:W (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945813 9c1j:W (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945814 9c1j:W (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945815 9c1j:W (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945816 9c1j:X (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945817 9c1j:X (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945818 9c1j:X (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945819 9c1j:X (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945820 9c1j:Y (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945821 9c1j:Y (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945822 9c1j:Y (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945823 9c1j:Y (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945824 9c1j:Z (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945825 9c1j:Z (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945826 9c1j:Z (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945827 9c1j:Z (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945828 9c1j:t (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945829 9c1j:t (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945830 9c1j:t (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945831 9c1j:t (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945832 9c1j:u (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945833 9c1j:u (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945834 9c1j:u (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945835 9c1j:u (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945836 9c1j:v (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945837 9c1j:v (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945838 9c1j:v (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945839 9c1j:v (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945840 9c1j:w (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945841 9c1j:w (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945842 9c1j:w (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945843 9c1j:w (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945844 9c1j:x (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945845 9c1j:x (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945846 9c1j:x (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945847 9c1j:x (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945848 9c1j:y (2.72) BS01 CA N/A GO:0019028 ... P12476 N/A
    945849 9c1j:y (2.72) BS02 CA N/A GO:0019028 ... P12476 N/A
    945850 9c1j:y (2.72) BS03 CA N/A GO:0019028 ... P12476 N/A
    945851 9c1j:y (2.72) BS04 CA N/A GO:0019028 ... P12476 N/A
    945852 9c1k:0 (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945853 9c1k:0 (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945854 9c1k:0 (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945855 9c1k:0 (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945856 9c1k:1 (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945857 9c1k:1 (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945858 9c1k:1 (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945859 9c1k:1 (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945860 9c1k:P (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945861 9c1k:P (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945862 9c1k:P (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945863 9c1k:P (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945864 9c1k:Q (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945865 9c1k:Q (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945866 9c1k:Q (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945867 9c1k:Q (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945868 9c1k:R (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945869 9c1k:R (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945870 9c1k:R (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945871 9c1k:R (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945872 9c1k:S (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945873 9c1k:S (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945874 9c1k:S (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945875 9c1k:S (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945876 9c1k:T (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945877 9c1k:T (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945878 9c1k:T (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945879 9c1k:T (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945880 9c1k:U (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945881 9c1k:U (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945882 9c1k:U (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945883 9c1k:U (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945884 9c1k:V (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945885 9c1k:V (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945886 9c1k:V (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945887 9c1k:V (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945888 9c1k:W (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945889 9c1k:W (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945890 9c1k:W (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945891 9c1k:W (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945892 9c1k:X (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945893 9c1k:X (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945894 9c1k:X (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945895 9c1k:X (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945896 9c1k:Y (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945897 9c1k:Y (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945898 9c1k:Y (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945899 9c1k:Y (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945900 9c1k:Z (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945901 9c1k:Z (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945902 9c1k:Z (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945903 9c1k:Z (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945904 9c1k:t (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945905 9c1k:t (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945906 9c1k:t (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945907 9c1k:t (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945908 9c1k:u (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945909 9c1k:u (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945910 9c1k:u (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945911 9c1k:u (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945912 9c1k:v (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945913 9c1k:v (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945914 9c1k:v (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945915 9c1k:v (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945916 9c1k:w (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945917 9c1k:w (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945918 9c1k:w (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945919 9c1k:w (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945920 9c1k:x (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945921 9c1k:x (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945922 9c1k:x (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945923 9c1k:x (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945924 9c1k:y (2.68) BS01 CA N/A GO:0019028 ... P12476 N/A
    945925 9c1k:y (2.68) BS02 CA N/A GO:0019028 ... P12476 N/A
    945926 9c1k:y (2.68) BS03 CA N/A GO:0019028 ... P12476 N/A
    945927 9c1k:y (2.68) BS04 CA N/A GO:0019028 ... P12476 N/A
    945928 9c1p:A (2.8) BS01 CA N/A GO:0004930 ... P41180 39298584
    945929 9c1p:A (2.8) BS02 CA N/A GO:0004930 ... P41180 39298584
    945930 9c1p:A (2.8) BS03 TRP N/A GO:0004930 ... P41180 39298584
    945931 9c1p:A (2.8) BS04 A1ATP N/A GO:0004930 ... P41180 39298584
    945932 9c1p:B (2.8) BS01 TRP N/A GO:0004930 ... P41180 39298584
    945933 9c1p:B (2.8) BS02 CA N/A GO:0004930 ... P41180 39298584
    945934 9c1p:B (2.8) BS03 A1ATP N/A GO:0004930 ... P41180 39298584
    945935 9c1q:A (1.8) BS01 A1ATT N/A GO:0016567 ... Q9Y4B6 N/A
    945936 9c1r:A (1.59) BS01 A1ATS N/A GO:0004672 ... P08581 39088797
    945937 9c1v:A (2.57) BS01 GLC N/A GO:0016740 ... I6X8D2 40739353
    945938 9c1v:A (2.57) BS02 GLC N/A GO:0016740 ... I6X8D2 40739353
    945939 9c1v:A (2.57) BS03 FRU N/A GO:0016740 ... I6X8D2 40739353
    945940 9c1v:A (2.57) BS04 GLC N/A GO:0016740 ... I6X8D2 40739353
    945941 9c1v:A (2.57) BS05 SO4 N/A GO:0016740 ... I6X8D2 40739353
    945942 9c1v:A (2.57) BS06 SO4 N/A GO:0016740 ... I6X8D2 40739353
    945943 9c1v:A (2.57) BS07 A1ATW N/A GO:0016740 ... I6X8D2 40739353
    945944 9c1v:B (2.57) BS01 FRU N/A GO:0016740 ... I6X8D2 40739353
    945945 9c1v:B (2.57) BS02 GLC N/A GO:0016740 ... I6X8D2 40739353
    945946 9c1v:B (2.57) BS03 GLC N/A GO:0016740 ... I6X8D2 40739353
    945947 9c1v:B (2.57) BS04 GLC N/A GO:0016740 ... I6X8D2 40739353
    945948 9c1v:B (2.57) BS05 FRU N/A GO:0016740 ... I6X8D2 40739353
    945949 9c1v:B (2.57) BS06 SO4 N/A GO:0016740 ... I6X8D2 40739353
    945950 9c1w:A (2.0) BS01 XOO N/A GO:0004672 ... P31751 39506119
    945951 9c1y:A (2.3) BS01 HEM N/A GO:0004517 ... P29475 40236557
    945952 9c1y:A (2.3) BS02 V5D N/A GO:0004517 ... P29475 40236557
    945953 9c1y:A (2.3) BS03 ZN N/A GO:0004517 ... P29475 40236557
    945954 9c1y:B (2.3) BS01 V5D N/A GO:0004517 ... P29475 40236557
    945955 9c1y:B (2.3) BS02 ZN N/A GO:0004517 ... P29475 40236557
    945956 9c1y:B (2.3) BS03 HEM N/A GO:0004517 ... P29475 40236557
    945957 9c1y:B (2.3) BS04 V5D N/A GO:0004517 ... P29475 40236557
    945958 9c1y:C (2.3) BS01 HEM N/A GO:0004517 ... P29475 40236557
    945959 9c1y:C (2.3) BS02 V5D N/A GO:0004517 ... P29475 40236557
    945960 9c1y:C (2.3) BS03 ZN N/A GO:0004517 ... P29475 40236557
    945961 9c1y:C (2.3) BS04 V5D N/A GO:0004517 ... P29475 40236557
    945962 9c1y:D (2.3) BS01 ZN N/A GO:0004517 ... P29475 40236557
    945963 9c1y:D (2.3) BS02 HEM N/A GO:0004517 ... P29475 40236557
    945964 9c1y:D (2.3) BS03 V5D N/A GO:0004517 ... P29475 40236557
    945965 9c1z:A (2.0) BS01 HEM N/A GO:0004517 ... P29474 40236557
    945966 9c1z:A (2.0) BS02 V5D N/A GO:0004517 ... P29474 40236557
    945967 9c1z:A (2.0) BS03 ZN N/A GO:0004517 ... P29474 40236557
    945968 9c1z:A (2.0) BS04 V5D N/A GO:0004517 ... P29474 40236557
    945969 9c1z:B (2.0) BS01 V5D N/A GO:0004517 ... P29474 40236557
    945970 9c1z:B (2.0) BS02 ZN N/A GO:0004517 ... P29474 40236557
    945971 9c1z:B (2.0) BS03 HEM N/A GO:0004517 ... P29474 40236557
    945972 9c1z:B (2.0) BS04 V5D N/A GO:0004517 ... P29474 40236557
    945973 9c1z:C (2.0) BS01 HEM N/A GO:0004517 ... P29474 40236557
    945974 9c1z:C (2.0) BS02 V5D N/A GO:0004517 ... P29474 40236557
    945975 9c1z:C (2.0) BS03 ZN N/A GO:0004517 ... P29474 40236557
    945976 9c1z:C (2.0) BS04 V5D N/A GO:0004517 ... P29474 40236557
    945977 9c1z:D (2.0) BS01 V5D N/A GO:0004517 ... P29474 40236557
    945978 9c1z:D (2.0) BS02 ZN N/A GO:0004517 ... P29474 40236557
    945979 9c1z:D (2.0) BS03 HEM N/A GO:0004517 ... P29474 40236557
    945980 9c1z:D (2.0) BS04 V5D N/A GO:0004517 ... P29474 40236557
    945981 9c20:A (2.699) BS01 5N6 N/A GO:0004308 ... A0A0H2YT71 39251137
    945982 9c28:A (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945983 9c28:B (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945984 9c28:C (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945985 9c28:D (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945986 9c28:E (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945987 9c28:F (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945988 9c28:G (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945989 9c28:H (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945990 9c28:I (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945991 9c28:J (3.12) BS01 MN N/A GO:0003824 ... P09606 39615488
    945992 9c29:A (8.0) BS01 dna N/A GO:0003676 ... P12497 41136407
    945993 9c29:A (8.0) BS02 dna N/A GO:0003676 ... P12497 41136407
    945994 9c29:A (8.0) BS03 dna N/A GO:0003676 ... P12497 41136407
    945995 9c29:E (8.0) BS01 dna N/A GO:0003676 ... P12497 41136407
    945996 9c29:I (8.0) BS01 dna N/A GO:0003676 ... P12497 41136407
    945997 9c29:I (8.0) BS02 dna N/A GO:0003676 ... P12497 41136407
    945998 9c29:I (8.0) BS03 dna N/A GO:0003676 ... P12497 41136407
    945999 9c29:M (8.0) BS01 dna N/A GO:0003676 ... P12497 41136407
    946000 9c2a:A (2.74) BS01 Y01 N/A GO:0000166 ... P51575 39353889

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).