SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    946001 9c2a:A (2.74) BS02 Y01 N/A GO:0000166 ... P51575 39353889
    946002 9c2a:B (2.74) BS01 Y01 N/A GO:0000166 ... P51575 39353889
    946003 9c2a:B (2.74) BS02 Y01 N/A GO:0000166 ... P51575 39353889
    946004 9c2a:C (2.74) BS01 Y01 N/A GO:0000166 ... P51575 39353889
    946005 9c2a:C (2.74) BS02 Y01 N/A GO:0000166 ... P51575 39353889
    946006 9c2b:A (2.42) BS01 ATP N/A GO:0000166 ... P51575 39353889
    946007 9c2b:A (2.42) BS02 ATP N/A GO:0000166 ... P51575 39353889
    946008 9c2b:B (2.42) BS01 ATP N/A GO:0000166 ... P51575 39353889
    946009 9c2b:B (2.42) BS02 ATP N/A GO:0000166 ... P51575 39353889
    946010 9c2b:C (2.42) BS01 ATP N/A GO:0000166 ... P51575 39353889
    946011 9c2b:C (2.42) BS02 ATP N/A GO:0000166 ... P51575 39353889
    946012 9c2c:A (2.9) BS01 A1ALI N/A GO:0000166 ... P51575 39353889
    946013 9c2c:A (2.9) BS02 A1ALI N/A GO:0000166 ... P51575 39353889
    946014 9c2c:A (2.9) BS03 A1ALI N/A GO:0000166 ... P51575 39353889
    946015 9c2c:B (2.9) BS01 A1ALI N/A GO:0000166 ... P51575 39353889
    946016 9c2c:B (2.9) BS02 A1ALI N/A GO:0000166 ... P51575 39353889
    946017 9c2c:B (2.9) BS03 A1ALI N/A GO:0000166 ... P51575 39353889
    946018 9c2c:C (2.9) BS01 A1ALI N/A GO:0000166 ... P51575 39353889
    946019 9c2c:C (2.9) BS02 A1ALI N/A GO:0000166 ... P51575 39353889
    946020 9c2c:C (2.9) BS03 A1ALI N/A GO:0000166 ... P51575 39353889
    946021 9c2f:A (2.8) BS01 CA N/A GO:0004930 ... P41180 39298584
    946022 9c2f:A (2.8) BS02 CA N/A GO:0004930 ... P41180 39298584
    946023 9c2f:A (2.8) BS03 TRP N/A GO:0004930 ... P41180 39298584
    946024 9c2f:A (2.8) BS04 A1ATX N/A GO:0004930 ... P41180 39298584
    946025 9c2f:B (2.8) BS01 TRP N/A GO:0004930 ... P41180 39298584
    946026 9c2f:B (2.8) BS02 CA N/A GO:0004930 ... P41180 39298584
    946027 9c2f:B (2.8) BS03 CA N/A GO:0004930 ... P41180 39298584
    946028 9c2f:B (2.8) BS04 A1ATX N/A GO:0004930 ... P41180 39298584
    946029 9c2g:A (2.29) BS01 MG N/A GO:0003824 ... N/A 40856435
    946030 9c2g:A (2.29) BS02 8K6 N/A GO:0003824 ... N/A 40856435
    946031 9c2g:C (2.29) BS01 8K6 N/A GO:0003824 ... N/A 40856435
    946032 9c2g:D (2.29) BS01 MG N/A GO:0003824 ... N/A 40856435
    946033 9c2g:D (2.29) BS02 8K6 N/A GO:0003824 ... N/A 40856435
    946034 9c2g:E (2.29) BS01 8K6 N/A GO:0003824 ... N/A 40856435
    946035 9c2i:A (3.62) BS01 CLR N/A GO:0005515 ... Q92887 39779684
    946036 9c2k:A (2.42) BS01 rna N/A N/A N/A N/A
    946037 9c2k:A (2.42) BS02 rna N/A N/A N/A N/A
    946038 9c2k:B (2.42) BS01 rna N/A N/A N/A N/A
    946039 9c2k:B (2.42) BS02 rna N/A N/A N/A N/A
    946040 9c2k:H (2.42) BS01 rna N/A N/A N/A N/A
    946041 9c2k:L (2.42) BS01 rna N/A N/A N/A N/A
    946042 9c2r:A (2.18) BS01 GLC N/A GO:0016740 ... I6X8D2 40739353
    946043 9c2r:A (2.18) BS02 GLC N/A GO:0016740 ... I6X8D2 40739353
    946044 9c2r:A (2.18) BS03 FRU N/A GO:0016740 ... I6X8D2 40739353
    946045 9c2r:A (2.18) BS04 GLC N/A GO:0016740 ... I6X8D2 40739353
    946046 9c2r:A (2.18) BS05 SO4 N/A GO:0016740 ... I6X8D2 40739353
    946047 9c2r:A (2.18) BS06 SO4 N/A GO:0016740 ... I6X8D2 40739353
    946048 9c2r:B (2.18) BS01 FRU N/A GO:0016740 ... I6X8D2 40739353
    946049 9c2r:B (2.18) BS02 GLC N/A GO:0016740 ... I6X8D2 40739353
    946050 9c2r:B (2.18) BS03 GLC N/A GO:0016740 ... I6X8D2 40739353
    946051 9c2r:B (2.18) BS04 GLC N/A GO:0016740 ... I6X8D2 40739353
    946052 9c2r:B (2.18) BS05 FRU N/A GO:0016740 ... I6X8D2 40739353
    946053 9c2r:B (2.18) BS06 SO4 N/A GO:0016740 ... I6X8D2 40739353
    946054 9c2y:A (1.96) BS01 peptide N/A GO:0004197 ... P42575 40117490
    946055 9c2y:B (1.96) BS01 peptide N/A GO:0004197 ... P42575 40117490
    946056 9c2y:C (1.96) BS01 peptide N/A GO:0004197 ... P42575 40117490
    946057 9c2y:D (1.96) BS01 peptide N/A GO:0004197 ... P42575 40117490
    946058 9c34:A (1.88) BS01 NAD N/A GO:0003700 ... F7X6I3 40738191
    946059 9c34:A (1.88) BS02 FDA N/A GO:0003700 ... F7X6I3 40738191
    946060 9c34:A (1.88) BS03 A1CAB N/A GO:0003700 ... F7X6I3 40738191
    946061 9c34:A (1.88) BS04 PRO N/A GO:0003700 ... F7X6I3 40738191
    946062 9c34:B (1.88) BS01 NAD N/A GO:0003700 ... F7X6I3 40738191
    946063 9c34:B (1.88) BS02 A1AT4 N/A GO:0003700 ... F7X6I3 40738191
    946064 9c35:A (1.74) BS01 NAD N/A GO:0003700 ... F7X6I3 40738191
    946065 9c35:A (1.74) BS02 A1AUG N/A GO:0003700 ... F7X6I3 40738191
    946066 9c35:A (1.74) BS03 FDA N/A GO:0003700 ... F7X6I3 40738191
    946067 9c35:B (1.74) BS01 NAD N/A GO:0003700 ... F7X6I3 40738191
    946068 9c35:B (1.74) BS02 FDA N/A GO:0003700 ... F7X6I3 40738191
    946069 9c36:A (1.47) BS01 NAD N/A GO:0003700 ... F7X6I3 40738191
    946070 9c36:A (1.47) BS02 FDA N/A GO:0003700 ... F7X6I3 40738191
    946071 9c36:A (1.47) BS03 A1AUG N/A GO:0003700 ... F7X6I3 40738191
    946072 9c36:A (1.47) BS04 MG N/A GO:0003700 ... F7X6I3 40738191
    946073 9c36:B (1.47) BS01 FDA N/A GO:0003700 ... F7X6I3 40738191
    946074 9c36:B (1.47) BS02 A1AUG N/A GO:0003700 ... F7X6I3 40738191
    946075 9c36:B (1.47) BS03 NAD N/A GO:0003700 ... F7X6I3 40738191
    946076 9c3c:A (4.3) BS01 BMA N/A GO:0005509 ... Q28685 39663457
    946077 9c3d:A (1.85) BS01 ZN N/A GO:0008270 ... C6W709 N/A
    946078 9c3d:A (1.85) BS02 ZN N/A GO:0008270 ... C6W709 N/A
    946079 9c3e:A (3.5) BS01 peptide N/A GO:0002250 ... P01848 41402338
    946080 9c3e:A (3.5) BS02 CLR N/A GO:0002250 ... P01848 41402338
    946081 9c3e:B (3.5) BS01 peptide N/A GO:0006091 ... P0DTU4 41402338
    946082 9c3e:B (3.5) BS02 CLR N/A GO:0006091 ... P0DTU4 41402338
    946083 9c3e:D (3.5) BS01 peptide N/A N/A P04234 41402338
    946084 9c3e:E (3.5) BS01 peptide N/A GO:0004888 ... P07766 41402338
    946085 9c3g:A (2.75) BS01 A1AVI N/A N/A Q8N884 39521150
    946086 9c3g:A (2.75) BS02 ZN N/A N/A Q8N884 39521150
    946087 9c3h:L8 (2.0) BS01 rna N/A GO:0000027 ... P46777 39571015
    946088 9c3h:L8 (2.0) BS02 rna N/A GO:0000027 ... P46777 39571015
    946089 9c3h:LB (2.0) BS01 rna N/A GO:0002181 ... P39023 39571015
    946090 9c3h:LC (2.0) BS01 rna N/A GO:0002181 ... P36578 39571015
    946091 9c3h:LC (2.0) BS02 rna N/A GO:0002181 ... P36578 39571015
    946092 9c3h:LC (2.0) BS03 peptide N/A GO:0002181 ... P36578 39571015
    946093 9c3h:LD (2.0) BS01 rna N/A GO:0002181 ... P62917 39571015
    946094 9c3h:LD (2.0) BS02 rna N/A GO:0002181 ... P62917 39571015
    946095 9c3h:LD (2.0) BS03 MG N/A GO:0002181 ... P62917 39571015
    946096 9c3h:LD (2.0) BS04 MG N/A GO:0002181 ... P62917 39571015
    946097 9c3h:LE (2.0) BS01 rna N/A GO:0002181 ... P61254 39571015
    946098 9c3h:LE (2.0) BS02 rna N/A GO:0002181 ... P61254 39571015
    946099 9c3h:LF (2.0) BS01 rna N/A GO:0000463 ... P18124 39571015
    946100 9c3h:LF (2.0) BS02 rna N/A GO:0000463 ... P18124 39571015
    946101 9c3h:LG (2.0) BS01 rna N/A GO:0000470 ... P62424 39571015
    946102 9c3h:LG (2.0) BS02 rna N/A GO:0000470 ... P62424 39571015
    946103 9c3h:LH (2.0) BS01 rna N/A GO:0002181 ... P32969 39571015
    946104 9c3h:LI (2.0) BS01 rna N/A GO:0002181 ... P62910 39571015
    946105 9c3h:LI (2.0) BS02 MG N/A GO:0002181 ... P62910 39571015
    946106 9c3h:LJ (2.0) BS01 rna N/A GO:0000027 ... P62913 39571015
    946107 9c3h:LJ (2.0) BS02 rna N/A GO:0000027 ... P62913 39571015
    946108 9c3h:LJ (2.0) BS03 rna N/A GO:0000027 ... P62913 39571015
    946109 9c3h:LK (2.0) BS01 rna N/A GO:0002181 ... Q02878 39571015
    946110 9c3h:LM (2.0) BS01 rna N/A GO:0002181 ... P50914 39571015
    946111 9c3h:LN (2.0) BS01 rna N/A GO:0002181 ... P61313 39571015
    946112 9c3h:LN (2.0) BS02 rna N/A GO:0002181 ... P61313 39571015
    946113 9c3h:LO (2.0) BS01 rna N/A GO:0000463 ... P42766 39571015
    946114 9c3h:LO (2.0) BS02 rna N/A GO:0000463 ... P42766 39571015
    946115 9c3h:LP (2.0) BS01 rna N/A GO:0000448 ... P61927 39571015
    946116 9c3h:LP (2.0) BS02 rna N/A GO:0000448 ... P61927 39571015
    946117 9c3h:LP (2.0) BS03 ZN N/A GO:0000448 ... P61927 39571015
    946118 9c3h:LQ (2.0) BS01 rna N/A GO:0002181 ... P26373 39571015
    946119 9c3h:LQ (2.0) BS02 rna N/A GO:0002181 ... P26373 39571015
    946120 9c3h:LR (2.0) BS01 rna N/A GO:0002181 ... P84098 39571015
    946121 9c3h:LR (2.0) BS02 rna N/A GO:0002181 ... P84098 39571015
    946122 9c3h:LS (2.0) BS01 rna N/A GO:0002181 ... Q02543 39571015
    946123 9c3h:LS (2.0) BS02 rna N/A GO:0002181 ... Q02543 39571015
    946124 9c3h:LT (2.0) BS01 rna N/A GO:0001650 ... P46778 39571015
    946125 9c3h:LT (2.0) BS02 rna N/A GO:0001650 ... P46778 39571015
    946126 9c3h:LU (2.0) BS01 rna N/A GO:0002181 ... P62891 39571015
    946127 9c3h:LU (2.0) BS02 rna N/A GO:0002181 ... P62891 39571015
    946128 9c3h:LV (2.0) BS01 rna N/A GO:0000122 ... P62829 39571015
    946129 9c3h:LW (2.0) BS01 rna N/A GO:0002181 ... P83731 39571015
    946130 9c3h:LW (2.0) BS02 rna N/A GO:0002181 ... P83731 39571015
    946131 9c3h:LY (2.0) BS01 rna N/A GO:0002181 ... P40429 39571015
    946132 9c3h:LZ (2.0) BS01 rna N/A GO:0002181 ... P61353 39571015
    946133 9c3h:La (2.0) BS01 rna N/A GO:0002181 ... P46776 39571015
    946134 9c3h:Lb (2.0) BS01 rna N/A GO:0002181 ... P47914 39571015
    946135 9c3h:Lc (2.0) BS01 rna N/A GO:0002181 ... P62888 39571015
    946136 9c3h:Ld (2.0) BS01 rna N/A GO:0002181 ... P62899 39571015
    946137 9c3h:Le (2.0) BS01 rna N/A GO:0002181 ... P83881 39571015
    946138 9c3h:Le (2.0) BS02 ZN N/A GO:0002181 ... P83881 39571015
    946139 9c3h:Lf (2.0) BS01 rna N/A GO:0002181 ... P18077 39571015
    946140 9c3h:Lg (2.0) BS01 rna N/A GO:0002181 ... P49207 39571015
    946141 9c3h:Lg (2.0) BS02 ZN N/A GO:0002181 ... P49207 39571015
    946142 9c3h:Lh (2.0) BS01 rna N/A GO:0002181 ... P18621 39571015
    946143 9c3h:Lh (2.0) BS02 rna N/A GO:0002181 ... P18621 39571015
    946144 9c3h:Lh (2.0) BS03 peptide N/A GO:0002181 ... P18621 39571015
    946145 9c3h:Li (2.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 39571015
    946146 9c3h:Lj (2.0) BS01 rna N/A GO:0002181 ... Q07020 39571015
    946147 9c3h:Lk (2.0) BS01 rna N/A GO:0002181 ... P63173 39571015
    946148 9c3h:Ll (2.0) BS01 rna N/A GO:0002181 ... P46779 39571015
    946149 9c3h:Lm (2.0) BS01 rna N/A GO:0002181 ... P35268 39571015
    946150 9c3h:Ln (2.0) BS01 rna N/A GO:0002181 ... P62750 39571015
    946151 9c3h:Ln (2.0) BS02 rna N/A GO:0002181 ... P62750 39571015
    946152 9c3h:Lo (2.0) BS01 rna N/A GO:0003735 ... P62987 39571015
    946153 9c3h:Lo (2.0) BS02 ZN N/A GO:0003735 ... P62987 39571015
    946154 9c3h:Lp (2.0) BS01 rna N/A GO:0002181 ... P61513 39571015
    946155 9c3h:Lp (2.0) BS02 ZN N/A GO:0002181 ... P61513 39571015
    946156 9c3h:Lz (2.0) BS01 rna N/A GO:0000122 ... P27635 39571015
    946157 9c3h:Lz (2.0) BS02 rna N/A GO:0000122 ... P27635 39571015
    946158 9c3h:Lz (2.0) BS03 rna N/A GO:0000122 ... P27635 39571015
    946159 9c3h:S1 (2.0) BS01 rna N/A GO:0002181 ... P61247 39571015
    946160 9c3h:SA (2.0) BS01 rna N/A GO:0000028 ... P08865 39571015
    946161 9c3h:SB (2.0) BS01 rna N/A GO:0005634 ... O75175 39571015
    946162 9c3h:SB (2.0) BS02 rna N/A GO:0005634 ... O75175 39571015
    946163 9c3h:SB (2.0) BS03 rna N/A GO:0005634 ... O75175 39571015
    946164 9c3h:SC (2.0) BS01 rna N/A GO:0002181 ... P15880 39571015
    946165 9c3h:SD (2.0) BS01 rna N/A GO:0002181 ... P46782 39571015
    946166 9c3h:SE (2.0) BS01 rna N/A GO:0002181 ... P62701 39571015
    946167 9c3h:SG (2.0) BS01 rna N/A GO:0002181 ... P62753 39571015
    946168 9c3h:SH (2.0) BS01 rna N/A GO:0002181 ... P62081 39571015
    946169 9c3h:SI (2.0) BS01 rna N/A GO:0002181 ... P62241 39571015
    946170 9c3h:SI (2.0) BS02 rna N/A GO:0002181 ... P62241 39571015
    946171 9c3h:SJ (2.0) BS01 rna N/A GO:0002181 ... P46781 39571015
    946172 9c3h:SK (2.0) BS01 rna N/A GO:0001228 ... P23396 39571015
    946173 9c3h:SL (2.0) BS01 rna N/A GO:0002181 ... P62280 39571015
    946174 9c3h:SM (2.0) BS01 rna N/A GO:0002181 ... P46783 39571015
    946175 9c3h:SN (2.0) BS01 rna N/A GO:0000462 ... P62277 39571015
    946176 9c3h:SN (2.0) BS02 rna N/A GO:0000462 ... P62277 39571015
    946177 9c3h:SO (2.0) BS01 rna N/A GO:0000028 ... P62263 39571015
    946178 9c3h:SP (2.0) BS01 rna N/A GO:0000056 ... P62841 39571015
    946179 9c3h:SP (2.0) BS02 rna N/A GO:0000056 ... P62841 39571015
    946180 9c3h:SQ (2.0) BS01 rna N/A GO:0000462 ... P62249 39571015
    946181 9c3h:SS (2.0) BS01 rna N/A GO:0002181 ... P08708 39571015
    946182 9c3h:ST (2.0) BS01 rna N/A GO:0002181 ... P62269 39571015
    946183 9c3h:ST (2.0) BS02 rna N/A GO:0002181 ... P62269 39571015
    946184 9c3h:ST (2.0) BS03 MG N/A GO:0002181 ... P62269 39571015
    946185 9c3h:SU (2.0) BS01 rna N/A GO:0000028 ... P39019 39571015
    946186 9c3h:SW (2.0) BS01 rna N/A GO:0002181 ... P62244 39571015
    946187 9c3h:SX (2.0) BS01 rna N/A GO:0002181 ... P62266 39571015
    946188 9c3h:SY (2.0) BS01 rna N/A GO:0002181 ... P62847 39571015
    946189 9c3h:SZ (2.0) BS01 rna N/A GO:0002181 ... P60866 39571015
    946190 9c3h:Sa (2.0) BS01 rna N/A GO:0002181 ... P62854 39571015
    946191 9c3h:Sa (2.0) BS02 ZN N/A GO:0002181 ... P62854 39571015
    946192 9c3h:Sb (2.0) BS01 rna N/A GO:0002181 ... P42677 39571015
    946193 9c3h:Sc (2.0) BS01 rna N/A GO:0002181 ... P62851 39571015
    946194 9c3h:Sc (2.0) BS02 rna N/A GO:0002181 ... P62851 39571015
    946195 9c3h:Sd (2.0) BS01 rna N/A GO:0000028 ... P62857 39571015
    946196 9c3h:Se (2.0) BS01 rna N/A GO:0002181 ... P62861 39571015
    946197 9c3h:Sf (2.0) BS01 rna N/A GO:0002181 ... P62273 39571015
    946198 9c3h:Sf (2.0) BS02 ZN N/A GO:0002181 ... P62273 39571015
    946199 9c3h:Sg (2.0) BS01 rna N/A GO:0001891 ... P63244 39571015
    946200 9c3h:Sy (2.0) BS01 rna N/A GO:0002181 ... P25398 39571015

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).