SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    956601 9dff:A (2.59) BS02 BDP N/A GO:0005540 ... P16112 40273987
    956602 9dff:A (2.59) BS03 BDP N/A GO:0005540 ... P16112 40273987
    956603 9dff:A (2.59) BS04 BDP N/A GO:0005540 ... P16112 40273987
    956604 9dff:B (2.59) BS01 BDP N/A GO:0005540 ... P16112 40273987
    956605 9dff:B (2.59) BS02 BDP N/A GO:0005540 ... P16112 40273987
    956606 9dff:B (2.59) BS03 BDP N/A GO:0005540 ... P16112 40273987
    956607 9dff:B (2.59) BS04 GCD N/A GO:0005540 ... P16112 40273987
    956608 9dfg:A (2.42) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956609 9dfg:A (2.42) BS02 CTE N/A GO:0019441 ... N/A 39725034
    956610 9dfg:B (2.42) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956611 9dfg:B (2.42) BS02 CTE N/A GO:0019441 ... N/A 39725034
    956612 9dfi:A (2.02) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956613 9dfi:A (2.02) BS02 TRP N/A GO:0019441 ... N/A 39725034
    956614 9dfi:B (2.02) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956615 9dfi:B (2.02) BS02 TRP N/A GO:0019441 ... N/A 39725034
    956616 9dfl:A (2.51) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956617 9dfl:A (2.51) BS02 IOP N/A GO:0019441 ... N/A 39725034
    956618 9dfl:B (2.51) BS01 HEM N/A GO:0019441 ... N/A 39725034
    956619 9dfl:B (2.51) BS02 IOP N/A GO:0019441 ... N/A 39725034
    956620 9dfm:A (2.25) BS01 TSS N/A GO:0019441 ... N/A 39725034
    956621 9dfm:A (2.25) BS02 HEM N/A GO:0019441 ... N/A 39725034
    956622 9dfm:B (2.25) BS01 TSS N/A GO:0019441 ... N/A 39725034
    956623 9dfm:B (2.25) BS02 HEM N/A GO:0019441 ... N/A 39725034
    956624 9dfn:A (1.5) BS01 SF4 N/A GO:0003824 ... G9N0G3 40373765
    956625 9dfn:A (1.5) BS02 SAM N/A GO:0003824 ... G9N0G3 40373765
    956626 9dfn:A (1.5) BS03 CTP N/A GO:0003824 ... G9N0G3 40373765
    956627 9dfs:A (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956628 9dfs:B (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956629 9dfs:C (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956630 9dfs:D (3.1) BS01 ADP N/A GO:0003774 ... P97479 N/A
    956631 9dft:B (3.5) BS01 SO4 N/A GO:0005540 ... P16112 40273987
    956632 9dfu:A (2.3) BS01 CTP N/A GO:0003824 ... G9N0G3 40373765
    956633 9dfu:A (2.3) BS02 SF4 N/A GO:0003824 ... G9N0G3 40373765
    956634 9dfu:A (2.3) BS03 SAM N/A GO:0003824 ... G9N0G3 40373765
    956635 9dfv:A (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956636 9dfv:B (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956637 9dfv:C (3.1) BS01 ADP N/A GO:0000287 ... P68135 N/A
    956638 9dfv:D (3.1) BS01 ADP N/A GO:0003774 ... P97479 N/A
    956639 9dfw:A (1.677) BS01 SF4 N/A GO:0003824 ... G9MQB8 40373765
    956640 9dfw:A (1.677) BS02 SAM N/A GO:0003824 ... G9MQB8 40373765
    956641 9dfw:A (1.677) BS03 CTP N/A GO:0003824 ... G9MQB8 40373765
    956642 9dfw:A (1.677) BS04 MG N/A GO:0003824 ... G9MQB8 40373765
    956643 9dfw:A (1.677) BS05 MG N/A GO:0003824 ... G9MQB8 40373765
    956644 9dfw:B (1.677) BS01 SF4 N/A GO:0003824 ... G9MQB8 40373765
    956645 9dfw:B (1.677) BS02 SAM N/A GO:0003824 ... G9MQB8 40373765
    956646 9dfw:B (1.677) BS03 CTP N/A GO:0003824 ... G9MQB8 40373765
    956647 9dfw:C (1.677) BS01 SF4 N/A GO:0003824 ... G9MQB8 40373765
    956648 9dfw:C (1.677) BS02 SAM N/A GO:0003824 ... G9MQB8 40373765
    956649 9dfw:C (1.677) BS03 CTP N/A GO:0003824 ... G9MQB8 40373765
    956650 9dfw:C (1.677) BS04 MG N/A GO:0003824 ... G9MQB8 40373765
    956651 9dfx:A (4.1) BS01 ATP N/A GO:0001669 ... P70673 40135739
    956652 9dfx:B (4.1) BS01 ATP N/A GO:0001669 ... P70673 40135739
    956653 9dfx:C (4.1) BS01 ATP N/A GO:0001669 ... P70673 40135739
    956654 9dfx:D (4.1) BS01 ATP N/A GO:0001669 ... P70673 40135739
    956655 9dfx:E (4.1) BS01 ATP N/A GO:0005267 ... A0A1U7R319 40135739
    956656 9dfx:E (4.1) BS02 A1A4F N/A GO:0005267 ... A0A1U7R319 40135739
    956657 9dg1:A (5.2) BS01 dna N/A GO:0003676 ... Q8ILY1 39490679
    956658 9dg2:A (1.93) BS01 COA N/A N/A P13702 N/A
    956659 9dg2:A (1.93) BS02 MEV N/A N/A P13702 N/A
    956660 9dg2:A (1.93) BS03 NAD N/A N/A P13702 N/A
    956661 9dg2:B (1.93) BS01 COA N/A N/A P13702 N/A
    956662 9dg2:B (1.93) BS02 NAD N/A N/A P13702 N/A
    956663 9dg2:B (1.93) BS03 MEV N/A N/A P13702 N/A
    956664 9dg3:A (3.46) BS01 dna N/A GO:0000786 ... P84233 39537923
    956665 9dg3:A (3.46) BS02 dna N/A GO:0000786 ... P84233 39537923
    956666 9dg3:B (3.46) BS01 dna N/A GO:0000786 ... P62799 39537923
    956667 9dg3:B (3.46) BS02 dna N/A GO:0000786 ... P62799 39537923
    956668 9dg3:C (3.46) BS01 dna N/A GO:0000786 ... P06897 39537923
    956669 9dg3:C (3.46) BS02 dna N/A GO:0000786 ... P06897 39537923
    956670 9dg3:D (3.46) BS01 dna N/A GO:0000786 ... P02281 39537923
    956671 9dg3:D (3.46) BS02 dna N/A GO:0000786 ... P02281 39537923
    956672 9dg3:E (3.46) BS01 dna N/A GO:0000786 ... P84233 39537923
    956673 9dg3:E (3.46) BS02 dna N/A GO:0000786 ... P84233 39537923
    956674 9dg3:F (3.46) BS01 dna N/A GO:0000786 ... P62799 39537923
    956675 9dg3:F (3.46) BS02 dna N/A GO:0000786 ... P62799 39537923
    956676 9dg3:G (3.46) BS01 dna N/A GO:0000786 ... P06897 39537923
    956677 9dg3:G (3.46) BS02 dna N/A GO:0000786 ... P06897 39537923
    956678 9dg3:H (3.46) BS01 dna N/A GO:0000786 ... P02281 39537923
    956679 9dg3:H (3.46) BS02 dna N/A GO:0000786 ... P02281 39537923
    956680 9dg3:M (3.46) BS01 ZN N/A GO:0000785 ... Q8N488 39537923
    956681 9dg5:A (2.25) BS01 ATP N/A GO:0000049 ... Q9WZV6 N/A
    956682 9dg5:A (2.25) BS02 THR N/A GO:0000049 ... Q9WZV6 N/A
    956683 9dg5:B (2.25) BS01 ATP N/A GO:0000049 ... Q9WZV6 N/A
    956684 9dg5:B (2.25) BS02 THR N/A GO:0000049 ... Q9WZV6 N/A
    956685 9dg6:A (1.75) BS01 SAH N/A GO:0030782 ... A0A5S8WF76 N/A
    956686 9dg6:A (1.75) BS02 A1A4I N/A GO:0030782 ... A0A5S8WF76 N/A
    956687 9dg7:A (2.5) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956688 9dg7:A (2.5) BS02 A1A4H N/A GO:0030782 ... A0A5S8WF76 N/A
    956689 9dg8:A (2.2) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956690 9dg8:A (2.2) BS02 REN N/A GO:0030782 ... A0A5S8WF76 N/A
    956691 9dg9:A (1.6) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956692 9dg9:A (1.6) BS02 A1A4H N/A GO:0030782 ... A0A5S8WF76 N/A
    956693 9dga:A (2.0) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956694 9dga:A (2.0) BS02 A1A4H N/A GO:0030782 ... A0A5S8WF76 N/A
    956695 9dgb:A (1.6) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956696 9dgb:A (1.6) BS02 REN N/A GO:0030782 ... A0A5S8WF76 N/A
    956697 9dgc:A (2.0) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956698 9dgc:A (2.0) BS02 REN N/A GO:0030782 ... A0A5S8WF76 N/A
    956699 9dgd:A (1.8) BS01 SAH N/A GO:0030782 ... A0A5S8WF76 N/A
    956700 9dgd:A (1.8) BS02 GHT N/A GO:0030782 ... A0A5S8WF76 N/A
    956701 9dge:A (1.6) BS01 SAM N/A GO:0030782 ... A0A5S8WF76 N/A
    956702 9dge:A (1.6) BS02 4NQ N/A GO:0030782 ... A0A5S8WF76 N/A
    956703 9dgf:A (1.85) BS01 SAH N/A GO:0030782 ... A0A5S8WF76 N/A
    956704 9dgf:A (1.85) BS02 A1A4J N/A GO:0030782 ... A0A5S8WF76 N/A
    956705 9dgg:A (2.98) BS01 dna N/A GO:0000786 ... P84233 39537923
    956706 9dgg:A (2.98) BS02 dna N/A GO:0000786 ... P84233 39537923
    956707 9dgg:B (2.98) BS01 dna N/A GO:0000786 ... P62799 39537923
    956708 9dgg:B (2.98) BS02 dna N/A GO:0000786 ... P62799 39537923
    956709 9dgg:C (2.98) BS01 dna N/A GO:0000786 ... P06897 39537923
    956710 9dgg:C (2.98) BS02 dna N/A GO:0000786 ... P06897 39537923
    956711 9dgg:D (2.98) BS01 dna N/A GO:0000786 ... P02281 39537923
    956712 9dgg:D (2.98) BS02 dna N/A GO:0000786 ... P02281 39537923
    956713 9dgg:E (2.98) BS01 dna N/A GO:0000786 ... P84233 39537923
    956714 9dgg:E (2.98) BS02 dna N/A GO:0000786 ... P84233 39537923
    956715 9dgg:F (2.98) BS01 dna N/A GO:0000786 ... P62799 39537923
    956716 9dgg:F (2.98) BS02 dna N/A GO:0000786 ... P62799 39537923
    956717 9dgg:G (2.98) BS01 dna N/A GO:0000786 ... P06897 39537923
    956718 9dgg:G (2.98) BS02 dna N/A GO:0000786 ... P06897 39537923
    956719 9dgg:H (2.98) BS01 dna N/A GO:0000786 ... P02281 39537923
    956720 9dgg:H (2.98) BS02 dna N/A GO:0000786 ... P02281 39537923
    956721 9dgg:K (2.98) BS01 ZN N/A GO:0000122 ... P35226 39537923
    956722 9dgg:K (2.98) BS02 ZN N/A GO:0000122 ... P35226 39537923
    956723 9dgg:L (2.98) BS01 ZN N/A GO:0000122 ... Q99496 39537923
    956724 9dgg:L (2.98) BS02 ZN N/A GO:0000122 ... Q99496 39537923
    956725 9dgh:A (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956726 9dgh:B (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956727 9dgh:C (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956728 9dgh:D (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956729 9dgh:E (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956730 9dgh:F (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956731 9dgh:G (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956732 9dgh:H (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956733 9dgh:I (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956734 9dgh:J (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956735 9dgh:K (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956736 9dgh:L (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956737 9dgh:M (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956738 9dgh:N (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956739 9dgh:O (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956740 9dgh:P (3.03) BS01 ZN N/A GO:0003824 ... P32169 40862094
    956741 9dgi:R (3.35) BS01 YVF N/A GO:0004930 ... P21554 40044644
    956742 9dgp:A (3.5) BS01 ADP N/A GO:0005524 ... A0A287B9W3 39803430
    956743 9dgp:A (3.5) BS02 ATP N/A GO:0005524 ... A0A287B9W3 39803430
    956744 9dgp:A (3.5) BS03 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956745 9dgp:A (3.5) BS04 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956746 9dgp:A (3.5) BS05 MG N/A GO:0005524 ... A0A287B9W3 39803430
    956747 9dgq:m (11.0) BS01 ADP N/A GO:0005524 ... A0A287B9W3 39803430
    956748 9dgq:m (11.0) BS02 ATP N/A GO:0005524 ... A0A287B9W3 39803430
    956749 9dgq:m (11.0) BS03 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956750 9dgq:m (11.0) BS04 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956751 9dgq:n (11.0) BS01 ADP N/A GO:0005524 ... A0A287B9W3 39803430
    956752 9dgq:n (11.0) BS02 ATP N/A GO:0005524 ... A0A287B9W3 39803430
    956753 9dgq:n (11.0) BS03 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956754 9dgq:n (11.0) BS04 ANP N/A GO:0005524 ... A0A287B9W3 39803430
    956755 9dgs:A (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956756 9dgs:B (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956757 9dgs:C (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956758 9dgs:D (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956759 9dgs:E (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956760 9dgs:F (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956761 9dgs:G (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956762 9dgs:H (3.9) BS01 ATP N/A GO:0001738 ... Q6QAQ1 39803430
    956763 9dgs:I (3.9) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956764 9dgs:J (3.9) BS01 ADP N/A GO:0005200 ... I3LHK5 39803430
    956765 9dgs:Y (3.9) BS01 ZN N/A GO:0001725 ... A0A4X1TB62 39803430
    956766 9dgs:Y (3.9) BS02 ZN N/A GO:0001725 ... A0A4X1TB62 39803430
    956767 9dgs:Y (3.9) BS03 ZN N/A GO:0001725 ... A0A4X1TB62 39803430
    956768 9dgt:A (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956769 9dgt:B (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956770 9dgt:C (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956771 9dgt:D (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956772 9dgt:E (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956773 9dgt:F (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956774 9dgt:G (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956775 9dgt:H (7.2) BS01 ATP N/A GO:0001738 ... Q6QAQ1 39803430
    956776 9dgt:I (7.2) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956777 9dgt:J (7.2) BS01 ADP N/A GO:0005200 ... I3LHK5 39803430
    956778 9dgt:L (7.2) BS01 peptide N/A GO:0003779 ... A0PFK7 39803430
    956779 9dgu:A (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956780 9dgu:B (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956781 9dgu:C (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956782 9dgu:D (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956783 9dgu:E (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956784 9dgu:F (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956785 9dgu:G (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956786 9dgu:H (7.1) BS01 ATP N/A GO:0001738 ... Q6QAQ1 39803430
    956787 9dgu:I (7.1) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956788 9dgu:J (7.1) BS01 ADP N/A GO:0005200 ... I3LHK5 39803430
    956789 9dgu:Y (7.1) BS01 ZN N/A GO:0001725 ... A0A4X1TB62 39803430
    956790 9dgv:A (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956791 9dgv:B (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956792 9dgv:C (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956793 9dgv:D (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956794 9dgv:E (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956795 9dgv:F (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956796 9dgv:G (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956797 9dgv:H (8.8) BS01 ATP N/A GO:0001738 ... Q6QAQ1 39803430
    956798 9dgv:I (8.8) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 39803430
    956799 9dgv:J (8.8) BS01 ADP N/A GO:0005200 ... I3LHK5 39803430
    956800 9dgv:Y (8.8) BS01 ZN N/A GO:0001725 ... A0A4X1TB62 39803430

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).