SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    972001 9fn7:C (1.12) BS02 A1ID0 N/A GO:0004089 ... O43570 39905940
    972002 9fn7:D (1.12) BS01 ZN N/A GO:0004089 ... O43570 39905940
    972003 9fn7:D (1.12) BS02 A1ID0 N/A GO:0004089 ... O43570 39905940
    972004 9fn8:A (1.21) BS01 ZN N/A GO:0004089 ... O43570 39905940
    972005 9fn8:A (1.21) BS02 A1IDL N/A GO:0004089 ... O43570 39905940
    972006 9fn8:B (1.21) BS01 ZN N/A GO:0004089 ... O43570 39905940
    972007 9fn8:B (1.21) BS02 A1IDL N/A GO:0004089 ... O43570 39905940
    972008 9fn8:C (1.21) BS01 ZN N/A GO:0004089 ... O43570 39905940
    972009 9fn8:C (1.21) BS02 A1IDL N/A GO:0004089 ... O43570 39905940
    972010 9fn8:D (1.21) BS01 ZN N/A GO:0004089 ... O43570 39905940
    972011 9fn8:D (1.21) BS02 A1IDL N/A GO:0004089 ... O43570 39905940
    972012 9fnc:A (2.21) BS01 RQM N/A GO:0003824 ... P27989 40727002
    972013 9fnc:A (2.21) BS02 SF4 N/A GO:0003824 ... P27989 40727002
    972014 9fnc:A (2.21) BS03 SF4 N/A GO:0003824 ... P27989 40727002
    972015 9fnc:B (2.21) BS01 RQM N/A GO:0003824 ... P27989 40727002
    972016 9fnc:B (2.21) BS02 SF4 N/A GO:0003824 ... P27989 40727002
    972017 9fnc:B (2.21) BS03 SF4 N/A GO:0003824 ... P27989 40727002
    972018 9fnc:C (2.21) BS01 SF4 N/A GO:0003824 ... P27988 40727002
    972019 9fnc:C (2.21) BS02 NI N/A GO:0003824 ... P27988 40727002
    972020 9fne:C (4.0) BS01 dna N/A GO:0003677 ... P60281 39919186
    972021 9fne:C (4.0) BS02 dna N/A GO:0003677 ... P60281 39919186
    972022 9fne:D (4.0) BS01 dna N/A GO:0000287 ... A0QS66 39919186
    972023 9fne:D (4.0) BS02 dna N/A GO:0000287 ... A0QS66 39919186
    972024 9fne:D (4.0) BS03 ZN N/A GO:0000287 ... A0QS66 39919186
    972025 9fne:D (4.0) BS04 ZN N/A GO:0000287 ... A0QS66 39919186
    972026 9fne:D (4.0) BS05 MG N/A GO:0000287 ... A0QS66 39919186
    972027 9fne:F (4.0) BS01 dna N/A GO:0003677 ... A0QW02 39919186
    972028 9fne:F (4.0) BS02 dna N/A GO:0003677 ... A0QW02 39919186
    972029 9fne:X (4.0) BS01 dna N/A N/A I7G3U5 39919186
    972030 9fne:X (4.0) BS02 dna N/A N/A I7G3U5 39919186
    972031 9fne:Y (4.0) BS01 dna N/A N/A A0QZ41 39919186
    972032 9fng:A (1.37) BS01 GLC N/A GO:0051118 ... G5EB58 40877455
    972033 9fng:A (1.37) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972034 9fng:B (1.37) BS01 BGC N/A GO:0051118 ... G5EB58 40877455
    972035 9fng:B (1.37) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972036 9fnh:A (1.92) BS01 peptide N/A GO:0051118 ... G5EB58 40877455
    972037 9fnh:A (1.92) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972038 9fnh:A (1.92) BS03 GLC N/A GO:0051118 ... G5EB58 40877455
    972039 9fnh:A (1.92) BS04 GLC N/A GO:0051118 ... G5EB58 40877455
    972040 9fnh:B (1.92) BS01 GLC N/A GO:0051118 ... G5EB58 40877455
    972041 9fnh:B (1.92) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972042 9fnh:B (1.92) BS03 GLC N/A GO:0051118 ... G5EB58 40877455
    972043 9fnh:B (1.92) BS04 BGC N/A GO:0051118 ... G5EB58 40877455
    972044 9fnh:B (1.92) BS05 GLC N/A GO:0051118 ... G5EB58 40877455
    972045 9fnh:B (1.92) BS06 GLC N/A GO:0051118 ... G5EB58 40877455
    972046 9fnh:B (1.92) BS07 GLC N/A GO:0051118 ... G5EB58 40877455
    972047 9fnh:B (1.92) BS08 GLC N/A GO:0051118 ... G5EB58 40877455
    972048 9fnh:B (1.92) BS09 GLC N/A GO:0051118 ... G5EB58 40877455
    972049 9fnh:C (1.92) BS01 peptide N/A GO:0051118 ... G5EB58 40877455
    972050 9fnh:C (1.92) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972051 9fnh:C (1.92) BS03 GLC N/A GO:0051118 ... G5EB58 40877455
    972052 9fnh:C (1.92) BS04 GLC N/A GO:0051118 ... G5EB58 40877455
    972053 9fnh:C (1.92) BS05 GLC N/A GO:0051118 ... G5EB58 40877455
    972054 9fnh:D (1.92) BS01 GLC N/A GO:0051118 ... G5EB58 40877455
    972055 9fnh:D (1.92) BS02 GLC N/A GO:0051118 ... G5EB58 40877455
    972056 9fnh:D (1.92) BS03 GLC N/A GO:0051118 ... G5EB58 40877455
    972057 9fnh:D (1.92) BS04 GLC N/A GO:0051118 ... G5EB58 40877455
    972058 9fnh:D (1.92) BS05 GLC N/A GO:0051118 ... G5EB58 40877455
    972059 9fnj:A (2.0) BS01 RQM N/A GO:0003824 ... P27989 40727002
    972060 9fnj:A (2.0) BS02 FES N/A GO:0003824 ... P27989 40727002
    972061 9fnj:A (2.0) BS03 SF4 N/A GO:0003824 ... P27989 40727002
    972062 9fnj:B (2.0) BS01 RQM N/A GO:0003824 ... P27989 40727002
    972063 9fnj:B (2.0) BS02 FES N/A GO:0003824 ... P27989 40727002
    972064 9fnj:B (2.0) BS03 SF4 N/A GO:0003824 ... P27989 40727002
    972065 9fnj:C (2.0) BS01 SF4 N/A GO:0003824 ... P27988 40727002
    972066 9fnj:C (2.0) BS02 NI N/A GO:0003824 ... P27988 40727002
    972067 9fnl:A (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972068 9fnl:A (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972069 9fnl:B (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972070 9fnl:B (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972071 9fnl:C (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972072 9fnl:C (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972073 9fnl:D (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972074 9fnl:D (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972075 9fnl:E (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972076 9fnl:E (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972077 9fnl:F (2.1) BS01 AHR N/A GO:0046373 ... A3DEX6 N/A
    972078 9fnl:F (2.1) BS02 AHR N/A GO:0046373 ... A3DEX6 N/A
    972079 9fnn:A (2.85) BS01 C2E N/A GO:0005886 ... P37653 39394223
    972080 9fnn:A (2.85) BS02 C2E N/A GO:0005886 ... P37653 39394223
    972081 9fnn:E (2.85) BS01 C2E N/A GO:0035438 ... P37657 39394223
    972082 9fnn:E (2.85) BS02 C2E N/A GO:0035438 ... P37657 39394223
    972083 9fnn:Q (2.85) BS01 peptide N/A GO:0005737 ... P0DP92 39394223
    972084 9fnn:Q (2.85) BS02 ATP N/A GO:0005737 ... P0DP92 39394223
    972085 9fnn:Q (2.85) BS03 ATP N/A GO:0005737 ... P0DP92 39394223
    972086 9fnn:U (2.85) BS01 C2E N/A GO:0035438 ... P37657 39394223
    972087 9fnn:U (2.85) BS02 C2E N/A GO:0035438 ... P37657 39394223
    972088 9fnn:W (2.85) BS01 peptide N/A GO:0005737 ... P0DP92 39394223
    972089 9fnn:W (2.85) BS02 ATP N/A GO:0005737 ... P0DP92 39394223
    972090 9fnn:W (2.85) BS03 ATP N/A GO:0005737 ... P0DP92 39394223
    972091 9fno:A (5.2) BS01 HEM N/A GO:0004601 ... P69905 39738064
    972092 9fno:B (5.2) BS01 HEM N/A GO:0004601 ... P68871 39738064
    972093 9fno:D (5.2) BS01 peptide N/A GO:0004252 ... P00738 39738064
    972094 9fno:E (5.2) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    972095 9fno:E (5.2) BS02 CA N/A GO:0016020 ... Q86VB7 39738064
    972096 9fno:F (5.2) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    972097 9fno:G (5.2) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    972098 9fnr:A (1.64) BS01 A1ICD N/A GO:0005576 ... P22629 39760306
    972099 9fnu:A (2.0) BS01 A1ID3 N/A GO:0000702 ... O08760 41092057
    972100 9fnu:B (2.0) BS01 A1ID3 N/A GO:0000702 ... O08760 41092057
    972101 9fnu:C (2.0) BS01 A1ID3 N/A GO:0000702 ... O08760 41092057
    972102 9fnv:A (2.25) BS01 A1IEJ N/A GO:0000702 ... O08760 41092057
    972103 9fnv:B (2.25) BS01 A1IEJ N/A GO:0000702 ... O08760 41092057
    972104 9fnv:C (2.25) BS01 A1IEJ N/A GO:0000702 ... O08760 41092057
    972105 9fny:A2 (3.2) BS01 rna N/A N/A Q8U232 39797736
    972106 9fny:A3 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972107 9fny:A4 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972108 9fny:A4 (3.2) BS02 rna N/A N/A Q8U3B0 39797736
    972109 9fny:A5 (3.2) BS01 rna N/A GO:0001682 ... Q8U160 39797736
    972110 9fny:AB (3.2) BS01 rna N/A GO:0003735 ... Q8U0F0 39797736
    972111 9fny:AC (3.2) BS01 rna N/A GO:0003676 ... Q8U004 39797736
    972112 9fny:AD (3.2) BS01 rna N/A GO:0003735 ... Q8TZE1 39797736
    972113 9fny:AE (3.2) BS01 rna N/A GO:0003723 ... P61993 39797736
    972114 9fny:AF (3.2) BS01 rna N/A GO:0003723 ... Q8U011 39797736
    972115 9fny:AG (3.2) BS01 rna N/A GO:0003723 ... Q8U017 39797736
    972116 9fny:AH (3.2) BS01 rna N/A GO:0003735 ... Q8U3H8 39797736
    972117 9fny:AI (3.2) BS01 rna N/A GO:0003735 ... Q8U0M8 39797736
    972118 9fny:AJ (3.2) BS01 rna N/A GO:0003735 ... Q8U014 39797736
    972119 9fny:AK (3.2) BS01 rna N/A GO:0003735 ... Q8U1Y5 39797736
    972120 9fny:AL (3.2) BS01 rna N/A GO:0000462 ... Q8U0E7 39797736
    972121 9fny:AM (3.2) BS01 rna N/A GO:0000049 ... P61885 39797736
    972122 9fny:AN (3.2) BS01 rna N/A GO:0003735 ... Q8U0E3 39797736
    972123 9fny:AO (3.2) BS01 rna N/A GO:0003735 ... P61995 39797736
    972124 9fny:AP (3.2) BS01 rna N/A GO:0003676 ... Q8U0E2 39797736
    972125 9fny:AQ (3.2) BS01 rna N/A GO:0002181 ... Q8U013 39797736
    972126 9fny:AR (3.2) BS01 rna N/A GO:0003735 ... Q8TZD9 39797736
    972127 9fny:AS (3.2) BS01 rna N/A GO:0003735 ... Q8U008 39797736
    972128 9fny:AT (3.2) BS01 rna N/A GO:0003735 ... Q8U0U1 39797736
    972129 9fny:AU (3.2) BS01 rna N/A GO:0000028 ... Q8U002 39797736
    972130 9fny:AV (3.2) BS01 rna N/A GO:0000028 ... Q8U0T4 39797736
    972131 9fny:AW (3.2) BS01 rna N/A GO:0003735 ... Q8U442 39797736
    972132 9fny:AX (3.2) BS01 rna N/A GO:0003735 ... Q8U443 39797736
    972133 9fny:AY (3.2) BS01 rna N/A GO:0003735 ... Q8U474 39797736
    972134 9fny:AZ (3.2) BS01 rna N/A GO:0000028 ... Q8U159 39797736
    972135 9fny:B2 (3.2) BS01 rna N/A N/A Q8U232 39797736
    972136 9fny:B3 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972137 9fny:B4 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972138 9fny:B4 (3.2) BS02 rna N/A N/A Q8U3B0 39797736
    972139 9fny:B5 (3.2) BS01 rna N/A GO:0001682 ... Q8U160 39797736
    972140 9fny:BB (3.2) BS01 rna N/A GO:0003735 ... Q8U0F0 39797736
    972141 9fny:BC (3.2) BS01 rna N/A GO:0003676 ... Q8U004 39797736
    972142 9fny:BD (3.2) BS01 rna N/A GO:0003735 ... Q8TZE1 39797736
    972143 9fny:BE (3.2) BS01 rna N/A GO:0003723 ... P61993 39797736
    972144 9fny:BF (3.2) BS01 rna N/A GO:0003723 ... Q8U011 39797736
    972145 9fny:BG (3.2) BS01 rna N/A GO:0003723 ... Q8U017 39797736
    972146 9fny:BH (3.2) BS01 rna N/A GO:0003735 ... Q8U3H8 39797736
    972147 9fny:BI (3.2) BS01 rna N/A GO:0003735 ... Q8U0M8 39797736
    972148 9fny:BJ (3.2) BS01 rna N/A GO:0003735 ... Q8U014 39797736
    972149 9fny:BK (3.2) BS01 rna N/A GO:0003735 ... Q8U1Y5 39797736
    972150 9fny:BL (3.2) BS01 rna N/A GO:0000462 ... Q8U0E7 39797736
    972151 9fny:BM (3.2) BS01 rna N/A GO:0000049 ... P61885 39797736
    972152 9fny:BN (3.2) BS01 rna N/A GO:0003735 ... Q8U0E3 39797736
    972153 9fny:BO (3.2) BS01 rna N/A GO:0003735 ... P61995 39797736
    972154 9fny:BP (3.2) BS01 rna N/A GO:0003676 ... Q8U0E2 39797736
    972155 9fny:BQ (3.2) BS01 rna N/A GO:0002181 ... Q8U013 39797736
    972156 9fny:BR (3.2) BS01 rna N/A GO:0003735 ... Q8TZD9 39797736
    972157 9fny:BS (3.2) BS01 rna N/A GO:0003735 ... Q8U008 39797736
    972158 9fny:BT (3.2) BS01 rna N/A GO:0003735 ... Q8U0U1 39797736
    972159 9fny:BU (3.2) BS01 rna N/A GO:0000028 ... Q8U002 39797736
    972160 9fny:BV (3.2) BS01 rna N/A GO:0000028 ... Q8U0T4 39797736
    972161 9fny:BW (3.2) BS01 rna N/A GO:0003735 ... Q8U442 39797736
    972162 9fny:BX (3.2) BS01 rna N/A GO:0003735 ... Q8U443 39797736
    972163 9fny:BY (3.2) BS01 rna N/A GO:0003735 ... Q8U474 39797736
    972164 9fny:BZ (3.2) BS01 rna N/A GO:0000028 ... Q8U159 39797736
    972165 9fnz:A2 (3.2) BS01 rna N/A N/A Q8U232 39797736
    972166 9fnz:A3 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972167 9fnz:A4 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972168 9fnz:A4 (3.2) BS02 rna N/A N/A Q8U3B0 39797736
    972169 9fnz:A5 (3.2) BS01 rna N/A GO:0001682 ... Q8U160 39797736
    972170 9fnz:AB (3.2) BS01 rna N/A GO:0003735 ... Q8U0F0 39797736
    972171 9fnz:AC (3.2) BS01 rna N/A GO:0003676 ... Q8U004 39797736
    972172 9fnz:AD (3.2) BS01 rna N/A GO:0003735 ... Q8TZE1 39797736
    972173 9fnz:AE (3.2) BS01 rna N/A GO:0003723 ... P61993 39797736
    972174 9fnz:AF (3.2) BS01 rna N/A GO:0003723 ... Q8U011 39797736
    972175 9fnz:AG (3.2) BS01 rna N/A GO:0003723 ... Q8U017 39797736
    972176 9fnz:AH (3.2) BS01 rna N/A GO:0003735 ... Q8U3H8 39797736
    972177 9fnz:AI (3.2) BS01 rna N/A GO:0003735 ... Q8U0M8 39797736
    972178 9fnz:AJ (3.2) BS01 rna N/A GO:0003735 ... Q8U014 39797736
    972179 9fnz:AK (3.2) BS01 rna N/A GO:0003735 ... Q8U1Y5 39797736
    972180 9fnz:AL (3.2) BS01 rna N/A GO:0000462 ... Q8U0E7 39797736
    972181 9fnz:AM (3.2) BS01 rna N/A GO:0000049 ... P61885 39797736
    972182 9fnz:AN (3.2) BS01 rna N/A GO:0003735 ... Q8U0E3 39797736
    972183 9fnz:AO (3.2) BS01 rna N/A GO:0003735 ... P61995 39797736
    972184 9fnz:AP (3.2) BS01 rna N/A GO:0003676 ... Q8U0E2 39797736
    972185 9fnz:AQ (3.2) BS01 rna N/A GO:0002181 ... Q8U013 39797736
    972186 9fnz:AR (3.2) BS01 rna N/A GO:0003735 ... Q8TZD9 39797736
    972187 9fnz:AS (3.2) BS01 rna N/A GO:0003735 ... Q8U008 39797736
    972188 9fnz:AT (3.2) BS01 rna N/A GO:0003735 ... Q8U0U1 39797736
    972189 9fnz:AU (3.2) BS01 rna N/A GO:0000028 ... Q8U002 39797736
    972190 9fnz:AV (3.2) BS01 rna N/A GO:0000028 ... Q8U0T4 39797736
    972191 9fnz:AW (3.2) BS01 rna N/A GO:0003735 ... Q8U442 39797736
    972192 9fnz:AX (3.2) BS01 rna N/A GO:0003735 ... Q8U443 39797736
    972193 9fnz:AY (3.2) BS01 rna N/A GO:0003735 ... Q8U474 39797736
    972194 9fnz:AZ (3.2) BS01 rna N/A GO:0000028 ... Q8U159 39797736
    972195 9fnz:B2 (3.2) BS01 rna N/A N/A Q8U232 39797736
    972196 9fnz:B3 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972197 9fnz:B4 (3.2) BS01 rna N/A N/A Q8U3B0 39797736
    972198 9fnz:B4 (3.2) BS02 rna N/A N/A Q8U3B0 39797736
    972199 9fnz:B5 (3.2) BS01 rna N/A GO:0001682 ... Q8U160 39797736
    972200 9fnz:BB (3.2) BS01 rna N/A GO:0003735 ... Q8U0F0 39797736

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).