SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1002801 9jvz:I (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002802 9jvz:J (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002803 9jvz:K (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002804 9jvz:L (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002805 9jvz:M (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002806 9jvz:N (2.56) BS01 BO2 N/A GO:0004176 ... P9WPC3 N/A
    1002807 9jw0:A (2.69) BS01 CA N/A GO:0051015 ... N/A 41337577
    1002808 9jw0:A (2.69) BS02 CA N/A GO:0051015 ... N/A 41337577
    1002809 9jw0:A (2.69) BS03 CA N/A GO:0051015 ... N/A 41337577
    1002810 9jw0:A (2.69) BS04 CA N/A GO:0051015 ... N/A 41337577
    1002811 9jw0:B (2.69) BS01 ATP N/A GO:0001725 ... P68139 41337577
    1002812 9jw1:A (3.46) BS01 ATP N/A GO:0001525 ... A0A0A0MTC1 40164614
    1002813 9jw1:A (3.46) BS02 MG N/A GO:0001525 ... A0A0A0MTC1 40164614
    1002814 9jw6:B (2.71) BS01 A1EDL N/A GO:0002218 ... Q86WV6 N/A
    1002815 9jw6:B (2.71) BS02 A1EER N/A GO:0002218 ... Q86WV6 N/A
    1002816 9jw6:D (2.71) BS01 A1EDL N/A GO:0002218 ... Q86WV6 N/A
    1002817 9jw6:D (2.71) BS02 A1EER N/A GO:0002218 ... Q86WV6 N/A
    1002818 9jwc:A (2.08) BS01 OO0 N/A GO:0009058 ... N/A N/A
    1002819 9jwc:A (2.08) BS02 PLP N/A GO:0009058 ... N/A N/A
    1002820 9jwc:B (2.08) BS01 PLP N/A GO:0009058 ... N/A N/A
    1002821 9jwe:A (1.287) BS01 ZN N/A GO:0004064 ... P00918 40441537
    1002822 9jwh:A (1.85) BS01 SO4 N/A GO:0003676 ... P61823 39490154
    1002823 9jwj:A (1.78) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1002824 9jwj:A (1.78) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1002825 9jwj:A (1.78) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1002826 9jwj:A (1.78) BS04 A1L4X N/A GO:0004407 ... Q92769 N/A
    1002827 9jwj:B (1.78) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1002828 9jwj:B (1.78) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1002829 9jwj:B (1.78) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1002830 9jwj:B (1.78) BS04 A1L4X N/A GO:0004407 ... Q92769 N/A
    1002831 9jwj:C (1.78) BS01 ZN N/A GO:0004407 ... Q92769 N/A
    1002832 9jwj:C (1.78) BS02 CA N/A GO:0004407 ... Q92769 N/A
    1002833 9jwj:C (1.78) BS03 CA N/A GO:0004407 ... Q92769 N/A
    1002834 9jwj:C (1.78) BS04 A1L4X N/A GO:0004407 ... Q92769 N/A
    1002835 9jwk:A (3.46) BS01 rna N/A GO:0003677 ... A0A1Q9YNK3 41106392
    1002836 9jwk:A (3.46) BS02 dna N/A GO:0003677 ... A0A1Q9YNK3 41106392
    1002837 9jwl:A (2.4) BS01 ALL N/A N/A N/A 41261139
    1002838 9jwl:B (2.4) BS01 ALL N/A N/A N/A 41261139
    1002839 9jwn:A (2.89) BS01 dna N/A GO:0003677 ... A0A1Q9YNK3 41106392
    1002840 9jwn:A (2.89) BS02 rna N/A GO:0003677 ... A0A1Q9YNK3 41106392
    1002841 9jwn:A (2.89) BS03 dna N/A GO:0003677 ... A0A1Q9YNK3 41106392
    1002842 9jws:A (2.5) BS01 RET N/A GO:0005216 ... Q18DH5 40368960
    1002843 9jws:A (2.5) BS02 MG N/A GO:0005216 ... Q18DH5 40368960
    1002844 9jws:A (2.5) BS03 MG N/A GO:0005216 ... Q18DH5 40368960
    1002845 9jws:B (2.5) BS01 RET N/A GO:0005216 ... Q18DH5 40368960
    1002846 9jws:B (2.5) BS02 MG N/A GO:0005216 ... Q18DH5 40368960
    1002847 9jws:B (2.5) BS03 MG N/A GO:0005216 ... Q18DH5 40368960
    1002848 9jwt:A (1.6) BS01 ALL N/A N/A N/A 41261139
    1002849 9jwu:A (1.229) BS01 ZN N/A GO:0004064 ... P00918 40441537
    1002850 9jwv:A (1.8) BS01 peptide N/A GO:0000122 ... P61964 40302551
    1002851 9jwv:B (1.8) BS01 peptide N/A GO:0000122 ... P61964 40302551
    1002852 9jww:A (1.251) BS01 ZN N/A GO:0004064 ... P00918 40441537
    1002853 9jwy:A (2.0) BS01 PO4 N/A N/A N/A 40801535
    1002854 9jx7:A (1.8) BS01 A1L4Z N/A GO:0003824 ... O32164 40832543
    1002855 9jxh:A (3.15) BS01 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002856 9jxh:A (3.15) BS02 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002857 9jxh:A (3.15) BS03 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002858 9jxh:B (3.15) BS01 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002859 9jxh:B (3.15) BS02 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002860 9jxh:B (3.15) BS03 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002861 9jxi:A (3.31) BS01 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002862 9jxi:A (3.31) BS02 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002863 9jxi:B (3.31) BS01 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002864 9jxi:B (3.31) BS02 I8P N/A GO:0000822 ... Q9UBH6 40858110
    1002865 9jxj:B (3.22) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002866 9jxj:B (3.22) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002867 9jxj:B (3.22) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002868 9jxk:B (3.38) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002869 9jxl:B (3.23) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002870 9jxl:B (3.23) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002871 9jxl:B (3.23) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002872 9jxm:B (3.48) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40858110
    1002873 9jxs:B (2.93) BS01 dna N/A GO:0003723 ... A0ACD6BA35 39904990
    1002874 9jxs:B (2.93) BS02 rna N/A GO:0003723 ... A0ACD6BA35 39904990
    1002875 9jxs:B (2.93) BS03 MG N/A GO:0003723 ... A0ACD6BA35 39904990
    1002876 9jxs:C (2.93) BS01 dna N/A N/A A0ACD6BA32 39904990
    1002877 9jxs:D (2.93) BS01 dna N/A N/A A0ACD6BA36 39904990
    1002878 9jxs:D (2.93) BS02 rna N/A N/A A0ACD6BA36 39904990
    1002879 9jxs:E (2.93) BS01 dna N/A N/A A0ACD6BA33 39904990
    1002880 9jxs:F (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002881 9jxs:F (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002882 9jxs:G (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002883 9jxs:G (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002884 9jxs:H (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002885 9jxs:H (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002886 9jxs:I (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002887 9jxs:I (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002888 9jxs:J (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002889 9jxs:J (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002890 9jxs:K (2.93) BS01 dna N/A N/A A0ACD6BA34 39904990
    1002891 9jxs:K (2.93) BS02 rna N/A N/A A0ACD6BA34 39904990
    1002892 9jxt:A (2.2) BS01 A1L40 N/A GO:0003824 ... O32164 40832543
    1002893 9jxx:A (2.5) BS01 rna N/A N/A F0NH84 40794864
    1002894 9jxx:B (2.5) BS01 rna N/A N/A F0NH84 40794864
    1002895 9jxx:C (2.5) BS01 rna N/A N/A F0NH84 40794864
    1002896 9jxx:D (2.5) BS01 rna N/A N/A F0NH84 40794864
    1002897 9jxz:a (3.31) BS01 peptide N/A GO:0004888 ... P20963 N/A
    1002898 9jxz:a (3.31) BS02 CLR N/A GO:0004888 ... P20963 N/A
    1002899 9jxz:m (3.31) BS01 peptide N/A N/A B7Z8B9 N/A
    1002900 9jxz:m (3.31) BS02 LPE N/A N/A B7Z8B9 N/A
    1002901 9jxz:m (3.31) BS03 CLR N/A N/A B7Z8B9 N/A
    1002902 9jy0:a (3.69) BS01 peptide N/A GO:0004888 ... P20963 N/A
    1002903 9jy0:m (3.69) BS01 peptide N/A N/A B7Z8B9 N/A
    1002904 9jy0:m (3.69) BS02 CLR N/A N/A B7Z8B9 N/A
    1002905 9jy0:n (3.69) BS01 peptide N/A GO:0002250 ... P0CF51
    Q99603
    N/A
    1002906 9jy1:A (3.08) BS01 peptide N/A GO:0004888 ... P20963 N/A
    1002907 9jy1:M (3.08) BS01 peptide N/A N/A B7Z8B9 N/A
    1002908 9jy1:N (3.08) BS01 peptide N/A GO:0002250 ... P0CF51
    Q99603
    N/A
    1002909 9jy1:a (3.08) BS01 peptide N/A GO:0004888 ... P20963 N/A
    1002910 9jy1:m (3.08) BS01 peptide N/A N/A B7Z8B9 N/A
    1002911 9jy2:a (3.24) BS01 peptide N/A N/A P20963 N/A
    1002912 9jy2:m (3.24) BS01 peptide N/A N/A B7Z8K6 N/A
    1002913 9jy2:m (3.24) BS02 CLR N/A N/A B7Z8K6 N/A
    1002914 9jym:A (2.07) BS01 MN N/A N/A N/A N/A
    1002915 9jym:A (2.07) BS02 AMP N/A N/A N/A N/A
    1002916 9jyn:A (1.7) BS01 AMP N/A N/A N/A N/A
    1002917 9jyo:A (1.6) BS01 A1EDY N/A GO:0000413 ... Q13526 40803165
    1002918 9jyp:A (1.6) BS01 A1EDZ N/A GO:0000413 ... Q13526 40803165
    1002919 9jyr:A (1.65) BS01 A1ED0 N/A GO:0000413 ... Q13526 40803165
    1002920 9jyr:A (1.65) BS02 A1ED0 N/A GO:0000413 ... Q13526 40803165
    1002921 9jys:A (1.75) BS01 A1ED1 N/A GO:0000413 ... Q13526 N/A
    1002922 9jyt:A (1.85) BS01 A1EDX N/A GO:0000413 ... Q13526 40803165
    1002923 9jyu:A (1.48) BS01 HEM N/A GO:0004601 ... P01968 N/A
    1002924 9jyu:B (1.48) BS01 HEM N/A GO:0004601 ... P02072 N/A
    1002925 9jyu:C (1.48) BS01 HEM N/A GO:0004601 ... P01968 N/A
    1002926 9jyu:D (1.48) BS01 HEM N/A GO:0004601 ... P02072 N/A
    1002927 9jyv:A (1.8) BS01 A1ED2 N/A GO:0000413 ... Q13526 40803165
    1002928 9jyv:A (1.8) BS02 A1ED2 N/A GO:0000413 ... Q13526 40803165
    1002929 9jyw:A (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002930 9jyw:B (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002931 9jyw:B (1.7) BS02 ZN N/A N/A A0A223E5F5 39637945
    1002932 9jyw:B (1.7) BS03 SO4 N/A N/A A0A223E5F5 39637945
    1002933 9jyw:C (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002934 9jyw:D (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002935 9jyw:D (1.7) BS02 ZN N/A N/A A0A223E5F5 39637945
    1002936 9jyw:D (1.7) BS03 SO4 N/A N/A A0A223E5F5 39637945
    1002937 9jyw:E (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002938 9jyw:F (1.7) BS01 ZN N/A N/A A0A223E5F5 39637945
    1002939 9jyx:A (2.798) BS01 PO4 N/A GO:0005548 ... O00562 41129229
    1002940 9jyy:G (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002941 9jyy:G (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002942 9jyy:G (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002943 9jyy:H (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002944 9jyy:H (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002945 9jyy:H (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002946 9jyy:M (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002947 9jyy:M (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002948 9jyy:M (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002949 9jyy:N (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002950 9jyy:N (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002951 9jyy:N (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002952 9jyy:O (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002953 9jyy:O (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002954 9jyy:O (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002955 9jyy:P (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002956 9jyy:P (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002957 9jyy:P (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002958 9jyy:Q (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002959 9jyy:Q (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002960 9jyy:Q (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002961 9jyy:R (3.0) BS01 peptide N/A GO:0039678 ... P03725 39704524
    1002962 9jyy:R (3.0) BS02 peptide N/A GO:0039678 ... P03725 39704524
    1002963 9jyy:R (3.0) BS03 peptide N/A GO:0039678 ... P03725 39704524
    1002964 9jyz:P (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1002965 9jyz:P (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1002966 9jyz:Q (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1002967 9jyz:Q (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1002968 9jyz:R (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1002969 9jyz:R (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1002970 9jyz:S (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1002971 9jyz:S (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1002972 9jyz:T (2.7) BS01 peptide N/A GO:0046718 ... P03747 39704524
    1002973 9jyz:T (2.7) BS02 peptide N/A GO:0046718 ... P03747 39704524
    1002974 9jyz:j (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002975 9jyz:j (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002976 9jyz:j (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002977 9jyz:k (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002978 9jyz:k (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002979 9jyz:k (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002980 9jyz:l (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002981 9jyz:l (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002982 9jyz:l (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002983 9jyz:m (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002984 9jyz:m (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002985 9jyz:m (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002986 9jyz:n (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002987 9jyz:n (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002988 9jyz:n (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002989 9jyz:o (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002990 9jyz:o (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002991 9jyz:o (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002992 9jyz:p (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002993 9jyz:p (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002994 9jyz:p (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002995 9jyz:q (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002996 9jyz:q (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1002997 9jyz:q (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524
    1002998 9jyz:r (2.7) BS01 peptide N/A GO:0019028 ... P03728 39704524
    1002999 9jyz:r (2.7) BS02 peptide N/A GO:0019028 ... P03728 39704524
    1003000 9jyz:r (2.7) BS03 peptide N/A GO:0019028 ... P03728 39704524

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).