SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    101201 2ptr:A (1.85) BS01 2SA 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101202 2ptr:A (1.85) BS02 2SA 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101203 2ptr:B (1.85) BS01 2SA 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101204 2ptr:B (1.85) BS02 2SA 4.3.2.2 GO:0003824 ... P0AB89 17531264
    101205 2ptw:A (1.9) BS01 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101206 2ptw:A (1.9) BS02 SO4 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101207 2ptx:A (1.9) BS01 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101208 2ptx:A (1.9) BS02 SO4 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101209 2pty:A (2.0) BS01 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101210 2pty:A (2.0) BS02 PEP 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101211 2ptz:A (1.65) BS01 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101212 2ptz:A (1.65) BS02 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101213 2ptz:A (1.65) BS03 PAH 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101214 2pu0:A (1.9) BS01 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101215 2pu0:A (1.9) BS02 ZN 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101216 2pu0:A (1.9) BS03 PAH 4.2.1.11 GO:0000015 ... Q38BV6 17822439
    101217 2pu1:A (1.8) BS01 ZN 4.2.1.11 GO:0000015 ... Q9NDH8 17822439
    101218 2pu1:A (1.8) BS02 ZN 4.2.1.11 GO:0000015 ... Q9NDH8 17822439
    101219 2pu1:A (1.8) BS03 FSG 4.2.1.11 GO:0000015 ... Q9NDH8 17822439
    101220 2pu2:A (1.86) BS01 DK2 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=37uM
    101221 2pu2:B (1.86) BS01 DK2 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=37uM
    101222 2pu3:A (1.5) BS01 MG 3.1.21.1 GO:0004518 ... Q2XSL7 18391403
    101223 2pu4:A (2.0) BS01 OX6 3.5.2.6 GO:0008800 ... P00811 18333608
    101224 2pu4:B (2.0) BS01 OX7 3.5.2.6 GO:0008800 ... P00811 18333608
    101225 2pu9:A (1.65) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101226 2pua:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 7973627
    101227 2pua:A (2.9) BS02 6MP ? GO:0000976 ... P0ACP7 7973627
    101228 2pub:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 7973627
    101229 2pub:A (2.7) BS02 ADE ? GO:0000976 ... P0ACP7 7973627
    101230 2puc:A (2.6) BS01 dna ? GO:0000976 ... P0ACP7 7973627
    101231 2pud:A (2.6) BS01 dna ? GO:0000976 ... P0ACP7 7973627
    101232 2pud:A (2.6) BS02 HPA ? GO:0000976 ... P0ACP7 7973627
    101233 2pue:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 9454587
    101234 2pue:A (2.7) BS02 ADE ? GO:0000976 ... P0ACP7 9454587
    101235 2puf:A (3.0) BS01 dna ? GO:0000976 ... P0ACP7 9454587
    101236 2puf:A (3.0) BS02 GUN ? GO:0000976 ... P0ACP7 9454587
    101237 2pug:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 9454587
    101238 2pug:A (2.7) BS02 HPA ? GO:0000976 ... P0ACP7 9454587
    101239 2puh:A (1.82) BS01 HPK 3.7.1.8 GO:0003824 ... P47229 17442675
    101240 2pui:A (2.2) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101241 2pui:A (2.2) BS02 ADP 2.7.1.100 GO:0005524 ... O31663 17522047
    101242 2pui:B (2.2) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101243 2pui:B (2.2) BS02 ADP 2.7.1.100 GO:0005524 ... O31663 17522047
    101244 2puj:A (1.57) BS01 HPZ 3.7.1.8 GO:0009056 ... P47229 17442675
    101245 2puk:A (3.0) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101246 2puk:E (3.0) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101247 2pul:A (2.0) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101248 2pul:A (2.0) BS02 ACP 2.7.1.100 GO:0005524 ... O31663 17522047
    101249 2pul:B (2.0) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101250 2pul:B (2.0) BS02 ACP 2.7.1.100 GO:0005524 ... O31663 17522047
    101251 2pum:A (2.7) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    101252 2pum:A (2.7) BS02 HEM 1.11.1.7 GO:0004601 ... P80025 N/A
    101253 2pum:A (2.7) BS03 CAQ 1.11.1.7 GO:0004601 ... P80025 N/A
    101254 2pun:A (2.3) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101255 2pun:A (2.3) BS02 ACP 2.7.1.100 GO:0005524 ... O31663 17522047
    101256 2pun:A (2.3) BS03 SR1 2.7.1.100 GO:0005524 ... O31663 17522047
    101257 2pun:B (2.3) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101258 2pun:B (2.3) BS02 SR1 2.7.1.100 GO:0005524 ... O31663 17522047
    101259 2pun:B (2.3) BS03 ACP 2.7.1.100 GO:0005524 ... O31663 17522047
    101260 2puo:A (1.7) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101261 2puo:A (1.7) BS02 NEQ 1.8.7.2 GO:0005515 ... Q55389 17611542
    101262 2pup:A (2.6) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101263 2pup:A (2.6) BS02 ADP 2.7.1.100 GO:0005524 ... O31663 17522047
    101264 2pup:B (2.6) BS01 MG 2.7.1.100 GO:0005524 ... O31663 17522047
    101265 2pup:B (2.6) BS02 ADP 2.7.1.100 GO:0005524 ... O31663 17522047
    101266 2puq:H (2.05) BS01 peptide 3.4.21.21 GO:0004252 ... P08709 17456045
    101267 2puq:H (2.05) BS02 BGC 3.4.21.21 GO:0004252 ... P08709 17456045
    101268 2puq:H (2.05) BS03 CA 3.4.21.21 GO:0004252 ... P08709 17456045
    101269 2puq:L (2.05) BS01 BGC 3.4.21.21 GO:0005509 ... P08709 17456045
    101270 2puq:L (2.05) BS02 FUC 3.4.21.21 GO:0005509 ... P08709 17456045
    101271 2put:A (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101272 2put:A (1.9) BS02 F6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101273 2put:B (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101274 2put:B (1.9) BS02 F6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101275 2put:C (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101276 2put:C (1.9) BS02 F6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101277 2put:D (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101278 2put:D (1.9) BS02 F6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101279 2puu:A (2.5) BS01 G2G 2.7.11.24 GO:0000077 ... P47811 N/A
    101280 2puv:A (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101281 2puv:A (1.9) BS02 M6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101282 2puv:B (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101283 2puv:B (1.9) BS02 M6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101284 2puv:C (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101285 2puv:C (1.9) BS02 M6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101286 2puv:D (1.9) BS01 UD1 2.6.1.16 GO:0097367 ... P53704 17681543
    101287 2puv:D (1.9) BS02 M6R 2.6.1.16 GO:0097367 ... P53704 17681543
    101288 2puw:A (3.151) BS01 BG6 2.6.1.16 GO:0097367 ... P53704 17681543
    101289 2puw:B (3.151) BS01 BG6 2.6.1.16 GO:0097367 ... P53704 17681543
    101290 2pux:B (2.0) BS01 peptide 3.4.21.5 GO:0004252 ... P19221 17606903
    101291 2puy:A (1.43) BS01 ZN ? N/A Q96BD5 17687328
    101292 2puy:A (1.43) BS02 ZN ? N/A Q96BD5 17687328
    101293 2puy:B (1.43) BS01 peptide ? N/A Q96BD5 17687328
    101294 2puy:B (1.43) BS02 ZN ? N/A Q96BD5 17687328
    101295 2puy:B (1.43) BS03 ZN ? N/A Q96BD5 17687328
    101296 2puz:A (1.83) BS01 FE 3.5.2.7 GO:0005506 ... Q8U8Z6 17640072
    101297 2puz:B (1.83) BS01 FE 3.5.2.7 GO:0005506 ... Q8U8Z6 17640072
    101298 2puz:B (1.83) BS02 NIG 3.5.2.7 GO:0005506 ... Q8U8Z6 17640072
    101299 2pv0:A (3.3) BS01 ZN ? GO:0000792 ... Q9UJW3 17687327
    101300 2pv0:A (3.3) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101301 2pv0:A (3.3) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101302 2pv0:B (3.3) BS01 ZN ? GO:0000792 ... Q9UJW3 17687327
    101303 2pv0:B (3.3) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101304 2pv0:B (3.3) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101305 2pv0:C (3.3) BS01 ZN ? GO:0000792 ... Q9UJW3 17687327
    101306 2pv0:C (3.3) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101307 2pv0:C (3.3) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101308 2pv1:A (1.3) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101309 2pv2:A (1.3) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101310 2pv2:B (1.3) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101311 2pv2:C (1.3) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101312 2pv2:D (1.3) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101313 2pv3:A (3.39) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101314 2pv3:B (3.39) BS01 peptide 5.2.1.8 GO:0003755 ... P0ABZ6 17825319
    101315 2pv7:A (2.0) BS01 TYR 1.3.1.12
    5.4.99.5
    GO:0004106 ... P43902 20944228
    101316 2pv7:A (2.0) BS02 NAD 1.3.1.12
    5.4.99.5
    GO:0004106 ... P43902 20944228
    101317 2pv7:B (2.0) BS01 TYR 1.3.1.12
    5.4.99.5
    GO:0004106 ... P43902 20944228
    101318 2pv7:B (2.0) BS02 NAD 1.3.1.12
    5.4.99.5
    GO:0004106 ... P43902 20944228
    101319 2pv9:B (3.5) BS01 peptide 3.4.21.5 GO:0004252 ... P19221 17606903
    101320 2pvb:A (0.91) BS01 CA ? GO:0005509 ... P02619 10548066
    101321 2pvb:A (0.91) BS02 CA ? GO:0005509 ... P02619 10548066
    101322 2pvc:A (3.69) BS01 peptide ? GO:0000792 ... Q9UJW3 17687327
    101323 2pvc:A (3.69) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101324 2pvc:A (3.69) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101325 2pvc:A (3.69) BS04 ZN ? GO:0000792 ... Q9UJW3 17687327
    101326 2pvc:B (3.69) BS01 peptide ? GO:0000792 ... Q9UJW3 17687327
    101327 2pvc:B (3.69) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101328 2pvc:B (3.69) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101329 2pvc:B (3.69) BS04 ZN ? GO:0000792 ... Q9UJW3 17687327
    101330 2pvc:C (3.69) BS01 peptide ? GO:0000792 ... Q9UJW3 17687327
    101331 2pvc:C (3.69) BS02 ZN ? GO:0000792 ... Q9UJW3 17687327
    101332 2pvc:C (3.69) BS03 ZN ? GO:0000792 ... Q9UJW3 17687327
    101333 2pvd:A (1.95) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101334 2pve:A (0.79) BS01 ZN ? GO:0005506 ... P00268 18053245
    101335 2pve:B (0.79) BS01 ZN ? GO:0005506 ... P00268 18053245
    101336 2pve:C (0.79) BS01 ZN ? GO:0005506 ... P00268 18053245
    101337 2pvf:A (1.8) BS01 peptide 2.7.10.1 GO:0004672 ... P21802 17803937
    101338 2pvf:A (1.8) BS02 MG 2.7.10.1 GO:0004672 ... P21802 17803937
    101339 2pvf:A (1.8) BS03 ACP 2.7.10.1 GO:0004672 ... P21802 17803937
    101340 2pvg:A (2.4) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101341 2pvg:C (2.4) BS01 FES ? GO:0005515 ... P27320 17611542
    101342 2pvh:A (2.2) BS01 P19 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.26uM
    BindingDB: Ki=260nM
    101343 2pvi:A (1.76) BS01 dna 3.1.21.4 GO:0009036 ... P23657 9628337
    101344 2pvi:A (1.76) BS02 dna 3.1.21.4 GO:0009036 ... P23657 9628337
    101345 2pvi:B (1.76) BS01 dna 3.1.21.4 GO:0009036 ... P23657 9628337
    101346 2pvi:B (1.76) BS02 dna 3.1.21.4 GO:0009036 ... P23657 9628337
    101347 2pvj:A (1.7) BS01 P44 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.005uM
    101348 2pvk:A (1.9) BS01 P45 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.008uM
    101349 2pvl:A (1.9) BS01 P55 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.024uM
    101350 2pvm:A (2.0) BS01 P29 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.36uM
    101351 2pvn:A (2.0) BS01 P63 2.7.11.1 GO:0004672 ... P28523 17540560 MOAD: Ki=0.00035uM
    101352 2pvo:A (3.4) BS01 SF4 1.8.7.2 GO:0005515 ... Q55389 17611542
    101353 2pvo:D (3.4) BS01 FES ? GO:0005515 ... P27320 17611542
    101354 2pvq:A (1.803) BS01 GSH 2.5.1.18 GO:0004364 ... P81065 18076047
    101355 2pvr:A (1.605) BS01 SO4 2.7.11.1 GO:0004672 ... P68400 17524418
    101356 2pvr:A (1.605) BS02 SO4 2.7.11.1 GO:0004672 ... P68400 17524418
    101357 2pvr:A (1.605) BS03 ANP 2.7.11.1 GO:0004672 ... P68400 17524418
    101358 2pvs:A (3.0) BS01 CA 3.1.1.26
    3.1.1.3
    GO:0004465 ... P54317 18702514
    101359 2pvs:B (3.0) BS01 CA 3.1.1.26
    3.1.1.3
    GO:0004465 ... P54317 18702514
    101360 2pvu:A (1.79) BS01 LYS ? GO:0015276 ... D0VWX8 18022195 MOAD: Kd=0.49uM
    101361 2pvv:A (2.11) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 17567119
    101362 2pvv:A (2.11) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 17567119
    101363 2pvv:A (2.11) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 17567119
    101364 2pvv:A (2.11) BS04 OSE 3.4.17.21 GO:0004180 ... Q04609 17567119 MOAD: ic50=438uM
    101365 2pvw:A (1.71) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 17567119
    101366 2pvw:A (1.71) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 17567119
    101367 2pvw:A (1.71) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 17567119
    101368 2pvw:A (1.71) BS04 G88 3.4.17.21 GO:0004180 ... Q04609 17567119 MOAD: ic50=0.3nM
    BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM, EC50=0.620000nM
    101369 2pvx:A (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101370 2pvx:B (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101371 2pvx:C (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101372 2pvx:D (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101373 2pvx:E (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101374 2pvx:F (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101375 2pvx:G (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101376 2pvx:H (1.04) BS01 ZN ? GO:0005506 ... P24297 18053245
    101377 2pvy:A (2.2) BS01 ACP 2.7.10.1 GO:0004672 ... P21802 17803937
    101378 2pvy:B (2.2) BS01 ACP 2.7.10.1 GO:0004672 ... P21802 17803937
    101379 2pvy:C (2.2) BS01 ACP 2.7.10.1 GO:0004672 ... P21802 17803937
    101380 2pvy:D (2.2) BS01 ACP 2.7.10.1 GO:0004672 ... P21802 17803937
    101381 2pvz:A (1.97) BS01 CA 5.3.3.- GO:0016853 ... Q8EJW4 17567742
    101382 2pvz:A (1.97) BS02 CA 5.3.3.- GO:0016853 ... Q8EJW4 17567742
    101383 2pvz:B (1.97) BS01 CA 5.3.3.- GO:0016853 ... Q8EJW4 17567742
    101384 2pw0:A (1.57) BS01 TRC 5.3.3.- GO:0016853 ... Q8EJW4 17567742
    101385 2pw0:B (1.57) BS01 TRC 5.3.3.- GO:0016853 ... Q8EJW4 17567742
    101386 2pw1:A (2.6) BS01 peptide N/A N/A N/A 19740978
    101387 2pw1:B (2.6) BS01 peptide N/A N/A N/A 19740978
    101388 2pw2:A (2.55) BS01 peptide N/A N/A N/A 19740978
    101389 2pw2:B (2.55) BS01 peptide N/A N/A N/A 19740978
    101390 2pw3:A (1.56) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 17582435 Manual survey: Km=56nM (17562314)
    101391 2pw3:A (1.56) BS02 CMP 3.1.4.53 GO:0004114 ... Q08499 17582435 Manual survey: Km=56nM (17562314)
    101392 2pw3:B (1.56) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 17582435 Manual survey: Km=56nM (17562314)
    101393 2pw3:B (1.56) BS02 CMP 3.1.4.53 GO:0004114 ... Q08499 17582435 Manual survey: Km=56nM (17562314)
    101394 2pw6:A (2.27) BS01 ZN 1.13.11.29 GO:0005737 ... P24197 N/A
    101395 2pw8:H (1.84) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 17685615
    101396 2pwa:A (0.83) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    101397 2pwa:A (0.83) BS02 B2A 3.4.21.64 GO:0004252 ... P06873 N/A
    101398 2pwa:A (0.83) BS03 B2A 3.4.21.64 GO:0004252 ... P06873 N/A
    101399 2pwb:A (1.9) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    101400 2pwb:A (1.9) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).