SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    104201 2qx8:B (1.6) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 18254726
    104202 2qx9:A (2.31) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 18254726
    104203 2qx9:A (2.31) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    104204 2qx9:A (2.31) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 18254726
    104205 2qx9:A (2.31) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 18254726
    104206 2qx9:B (2.31) BS01 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 BindingDB: IC50=1100nM, Ki=6.5nM
    104207 2qx9:B (2.31) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 BindingDB: IC50=1100nM, Ki=6.5nM
    104208 2qx9:B (2.31) BS03 FAD 1.10.5.1 GO:0001512 ... P16083 18254726
    104209 2qx9:B (2.31) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 18254726
    104210 2qxf:A (1.5) BS01 MG 3.1.11.1 GO:0000175 ... P04995 18219121
    104211 2qxf:A (1.5) BS02 TMP 3.1.11.1 GO:0000175 ... P04995 18219121
    104212 2qxg:A (2.6) BS01 K7I 3.4.21.117 GO:0001533 ... P49862 17909180
    104213 2qxg:B (2.6) BS01 K7I 3.4.21.117 GO:0001533 ... P49862 17909180
    104214 2qxh:A (2.0) BS01 K7J 3.4.21.117 GO:0001533 ... P49862 17909180
    104215 2qxi:A (1.0) BS01 K7J 3.4.21.117 GO:0001533 ... P49862 17909180
    104216 2qxj:A (2.1) BS01 K7J 3.4.21.117 GO:0001533 ... P49862 17909180
    104217 2qxl:A (2.41) BS01 ATP ? GO:0000774 ... P32589 17923091
    104218 2qxl:B (2.41) BS01 ATP ? GO:0000774 ... P32589 17923091
    104219 2qxm:A (2.3) BS01 peptide ? N/A P03372 18344977
    104220 2qxm:A (2.3) BS02 PIQ ? N/A P03372 18344977
    104221 2qxm:B (2.3) BS01 peptide ? N/A P03372 18344977
    104222 2qxm:B (2.3) BS02 PIQ ? N/A P03372 18344977
    104223 2qxs:A (1.7) BS01 RAL ? N/A P03372 20924370 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    104224 2qxs:B (1.7) BS01 RAL ? N/A P03372 20924370 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    104225 2qxv:A (1.82) BS01 peptide ? N/A Q921E6 17937919
    104226 2qxw:A (0.8) BS01 NDP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 18250329
    104227 2qxw:A (0.8) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 18250329 BindingDB: IC50=30nM
    104228 2qxx:A (2.0) BS01 TTP 3.5.4.30 GO:0004170 ... P9WP17 18164314
    104229 2qxx:B (2.0) BS01 TTP 3.5.4.30 GO:0004170 ... P9WP17 18164314
    104230 2qyf:A (2.3) BS01 peptide ? GO:0000775 ... Q13257 18022368
    104231 2qyf:C (2.3) BS01 peptide ? GO:0000775 ... Q13257 18022368
    104232 2qyi:A (2.6) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    104233 2qyi:C (2.6) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    104234 2qyj:A (2.05) BS01 SO4 N/A N/A N/A 18155045
    104235 2qyj:A (2.05) BS02 SO4 N/A N/A N/A 18155045
    104236 2qyj:A (2.05) BS03 SO4 N/A N/A N/A 18155045
    104237 2qyk:A (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    104238 2qyk:A (2.1) BS02 ZN 3.1.4.53 GO:0004114 ... P27815 17727341
    104239 2qyk:B (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    104240 2qyk:B (2.1) BS02 ZN 3.1.4.53 GO:0004114 ... P27815 17727341
    104241 2qyl:A (1.95) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 17727341
    104242 2qyl:A (1.95) BS02 MG 3.1.4.53 GO:0004114 ... Q07343 17727341
    104243 2qyl:A (1.95) BS03 NPV 3.1.4.53 GO:0004114 ... Q07343 17727341 MOAD: ic50=0.65uM
    BindingDB: IC50=650nM
    104244 2qym:A (1.9) BS01 ZN 3.1.4.53 GO:0004114 ... Q08493 17727341
    104245 2qyn:A (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    BindingDB: IC50=1nM
    104246 2qyn:A (1.57) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 17727341
    104247 2qyn:B (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    BindingDB: IC50=1nM
    104248 2qyn:B (1.57) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 17727341
    104249 2qyo:A (1.95) BS01 SAH 2.1.1.150 GO:0008168 ... Q06YR3 N/A
    104250 2qyo:A (1.95) BS02 QSO 2.1.1.150 GO:0008168 ... Q06YR3 N/A
    104251 2qyo:B (1.95) BS01 SAH 2.1.1.150 GO:0008168 ... Q06YR3 N/A
    104252 2qyo:B (1.95) BS02 QSO 2.1.1.150 GO:0008168 ... Q06YR3 N/A
    104253 2qyq:A (1.948) BS01 PTR ? GO:0003723 ... P30086 N/A
    104254 2qyv:A (2.11) BS01 ZN 3.4.13.20 GO:0005829 ... Q0I1B9 N/A
    104255 2qyv:A (2.11) BS02 ZN 3.4.13.20 GO:0005829 ... Q0I1B9 N/A
    104256 2qyv:B (2.11) BS01 ZN 3.4.13.20 GO:0005829 ... Q0I1B9 N/A
    104257 2qyv:B (2.11) BS02 ZN 3.4.13.20 GO:0005829 ... Q0I1B9 N/A
    104258 2qz2:A (2.8) BS01 XYP 3.2.1.8 GO:0004553 ... P55329 17983355
    104259 2qz2:A (2.8) BS02 XYP 3.2.1.8 GO:0004553 ... P55329 17983355
    104260 2qz2:A (2.8) BS03 XYP 3.2.1.8 GO:0004553 ... P55329 17983355
    104261 2qz2:A (2.8) BS04 XYP 3.2.1.8 GO:0004553 ... P55329 17983355
    104262 2qz3:A (1.8) BS01 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104263 2qz3:A (1.8) BS02 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104264 2qz3:A (1.8) BS03 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104265 2qz3:A (1.8) BS04 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104266 2qz3:B (1.8) BS01 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104267 2qz3:B (1.8) BS02 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104268 2qz3:B (1.8) BS03 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104269 2qz3:B (1.8) BS04 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104270 2qz3:B (1.8) BS05 XYP 3.2.1.8 GO:0004553 ... P18429 17983355
    104271 2qz4:A (2.22) BS01 ADP 3.4.24.-
    3.6.-.-
    GO:0005524 ... Q9UQ90 19841671
    104272 2qzk:A (1.8) BS01 I21 3.4.23.46 GO:0004190 ... P56817 17827011 MOAD: ic50=27nM
    104273 2qzl:A (1.8) BS01 IXS 3.4.23.46 GO:0004190 ... P56817 16690314 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    104274 2qzo:A (1.72) BS01 peptide ? N/A P03372 20924370
    104275 2qzo:A (1.72) BS02 KN1 ? N/A P03372 20924370 BindingDB: IC50=1300nM
    104276 2qzo:B (1.72) BS01 peptide ? N/A P03372 20924370
    104277 2qzo:B (1.72) BS02 KN1 ? N/A P03372 20924370 BindingDB: IC50=1300nM
    104278 2qzr:A (1.95) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 17902085
    104279 2qzr:A (1.95) BS02 S79 2.4.2.29 GO:0002099 ... P28720 17902085 MOAD: Ki=55nM
    104280 2qzs:A (2.2) BS01 GLC 2.4.1.21 GO:0004373 ... P0A6U8 19244233
    104281 2qzs:A (2.2) BS02 ADP 2.4.1.21 GO:0004373 ... P0A6U8 19244233
    104282 2qzs:A (2.2) BS03 250 2.4.1.21 GO:0004373 ... P0A6U8 19244233
    104283 2qzt:A (1.7) BS01 PLM ? GO:0005829 ... Q0GY13 18084051
    104284 2qzt:A (1.7) BS02 PLM ? GO:0005829 ... Q0GY13 18084051
    104285 2qzt:B (1.7) BS01 PLM ? GO:0005829 ... Q0GY13 18084051
    104286 2qzx:A (2.5) BS01 peptide 3.4.23.24 GO:0004190 ... P43094 18384081
    104287 2qzx:B (2.5) BS01 peptide 3.4.23.24 GO:0004190 ... P43094 18384081
    104288 2qzy:A (1.9) BS01 TQY 4.1.1.32 GO:0004611 ... P21642 16819824
    104289 2qzy:A (1.9) BS02 FRU 4.1.1.32 GO:0004611 ... P21642 16819824
    104290 2qzy:A (1.9) BS03 MN 4.1.1.32 GO:0004611 ... P21642 16819824
    104291 2qzy:A (1.9) BS04 PEP 4.1.1.32 GO:0004611 ... P21642 16819824
    104292 2qzy:B (1.9) BS01 TQY 4.1.1.32 GO:0004611 ... P21642 16819824
    104293 2qzy:B (1.9) BS02 MN 4.1.1.32 GO:0004611 ... P21642 16819824
    104294 2qzy:B (1.9) BS03 PEP 4.1.1.32 GO:0004611 ... P21642 16819824
    104295 2qzz:A (1.6) BS01 NAP 1.1.1.318 GO:0009699 ... Q15GI4 17912370
    104296 2qzz:A (1.6) BS02 EMF 1.1.1.318 GO:0009699 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    104297 2qzz:B (1.6) BS01 NAP 1.1.1.318 GO:0009699 ... Q15GI4 17912370
    104298 2qzz:B (1.6) BS02 EMF 1.1.1.318 GO:0009699 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    104299 2r00:C (2.03) BS01 OEG 1.2.1.11 GO:0004073 ... P23247 18323627
    104300 2r01:A (1.15) BS01 CA ? GO:0016491 ... Q8KFI1 N/A
    104301 2r01:A (1.15) BS02 FMN ? GO:0016491 ... Q8KFI1 N/A
    104302 2r02:A (2.6) BS01 peptide ? N/A Q8WUM4 18066081
    104303 2r03:A (2.59) BS01 peptide ? N/A Q8WUM4 18066081
    104304 2r04:1 (3.0) BS01 W71 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    104305 2r05:A (2.55) BS01 peptide ? N/A Q8WUM4 18066081
    104306 2r06:1 (3.0) BS01 W35 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    104307 2r07:1 (3.0) BS01 W33 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    104308 2r09:A (1.9) BS01 4IP ? GO:0005085 ... O08967 18042453
    104309 2r09:B (1.9) BS01 4IP ? GO:0005085 ... O08967 18042453
    104310 2r0c:A (1.8) BS01 FAD ? GO:0016491 ... Q8KI25 17873060
    104311 2r0d:A (2.04) BS01 4IP ? GO:0005085 ... O08967 18042453
    104312 2r0d:B (2.04) BS01 4IP ? GO:0005085 ... O08967 18042453
    104313 2r0g:A (2.37) BS01 FAD ? GO:0016491 ... Q8KI25 17873060
    104314 2r0g:A (2.37) BS02 7CK ? GO:0016491 ... Q8KI25 17873060
    104315 2r0g:B (2.37) BS01 FAD ? GO:0016491 ... Q8KI25 17873060
    104316 2r0g:B (2.37) BS02 7CK ? GO:0016491 ... Q8KI25 17873060
    104317 2r0l:A (2.2) BS01 peptide 3.4.21.- GO:0004252 ... Q04756 18077410
    104318 2r0m:A (2.7) BS01 FAD 1.3.8.6 GO:0000062 ... Q92947 18020372
    104319 2r0m:A (2.7) BS02 4NI 1.3.8.6 GO:0000062 ... Q92947 18020372
    104320 2r0n:A (2.3) BS01 FAD 1.3.8.6 GO:0000062 ... Q92947 18020372
    104321 2r0n:A (2.3) BS02 TGC 1.3.8.6 GO:0000062 ... Q92947 18020372
    104322 2r0p:A (2.1) BS01 FAD ? GO:0016491 ... Q8KI25 17873060
    104323 2r0p:A (2.1) BS02 K2C ? GO:0016491 ... Q8KI25 17873060
    104324 2r0q:C (3.2) BS01 dna ? GO:0000150 ... P20384 18439894
    104325 2r0q:C (3.2) BS02 dna ? GO:0000150 ... P20384 18439894
    104326 2r0q:D (3.2) BS01 dna ? GO:0000150 ... P20384 18439894
    104327 2r0q:D (3.2) BS02 dna ? GO:0000150 ... P20384 18439894
    104328 2r0q:E (3.2) BS01 dna ? GO:0000150 ... P20384 18439894
    104329 2r0q:E (3.2) BS02 dna ? GO:0000150 ... P20384 18439894
    104330 2r0q:F (3.2) BS01 dna ? GO:0000150 ... P20384 18439894
    104331 2r0q:F (3.2) BS02 dna ? GO:0000150 ... P20384 18439894
    104332 2r0t:A (1.9) BS01 PGU 2.6.1.- GO:0000271 ... Q9F118 17997582
    104333 2r0t:A (1.9) BS02 PGU 2.6.1.- GO:0000271 ... Q9F118 17997582
    104334 2r0t:B (1.9) BS01 PGU 2.6.1.- GO:0000271 ... Q9F118 17997582
    104335 2r0t:B (1.9) BS02 PGU 2.6.1.- GO:0000271 ... Q9F118 17997582
    104336 2r0u:A (1.9) BS01 M54 2.7.11.1 GO:0000077 ... O14757 17900896 MOAD: ic50=1nM
    BindingDB: IC50=1nM
    104337 2r0w:H (2.503) BS01 peptide ? N/A P01863 17895381
    104338 2r0w:L (2.503) BS01 peptide ? GO:0005576 ... P01631 17895381
    104339 2r0y:A (1.75) BS01 peptide ? GO:0006338 ... Q02206 17803945
    104340 2r0z:H (2.096) BS01 peptide N/A N/A P01863 17895381
    104341 2r0z:L (2.096) BS01 peptide ? GO:0005576 ... A2NHM3 17895381
    104342 2r13:A (1.8) BS01 FES 2.6.1.3 GO:0010506 ... Q9NZ45 17905743
    104343 2r14:A (1.4) BS01 FMN ? GO:0005829 ... Q51990 17939663
    104344 2r14:A (1.4) BS02 TXD ? GO:0005829 ... Q51990 17939663 MOAD: Kd=0.63mM
    104345 2r16:A (1.04) BS01 CA ? N/A Q28146 18334217
    104346 2r1b:A (1.72) BS01 CA ? N/A Q63373 18334217
    104347 2r1b:B (1.72) BS01 CA ? N/A Q63373 18334217
    104348 2r1d:B (2.6) BS01 CA ? N/A Q63373 18334217
    104349 2r1d:D (2.6) BS01 CA ? N/A Q63373 18334217
    104350 2r1d:H (2.6) BS01 peptide ? N/A Q63373 18334217
    104351 2r1d:I (2.6) BS01 CA ? N/A Q63373 18334217
    104352 2r1h:A (1.9) BS01 HEM ? GO:0004601 ... P14527 18831041
    104353 2r1h:B (1.9) BS01 HEM ? GO:0004601 ... P02141 18831041
    104354 2r1h:C (1.9) BS01 HEM ? GO:0004601 ... P14527 18831041
    104355 2r1h:D (1.9) BS01 HEM ? GO:0004601 ... P02141 18831041
    104356 2r1j:L (1.53) BS01 dna ? GO:0003677 ... P69202 18237194
    104357 2r1j:L (1.53) BS02 dna ? GO:0003677 ... P69202 18237194
    104358 2r1j:R (1.53) BS01 dna ? GO:0003677 ... P69202 18237194
    104359 2r1j:R (1.53) BS02 dna ? GO:0003677 ... P69202 18237194
    104360 2r1k:A (2.1) BS01 FE2 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104361 2r1k:A (2.1) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104362 2r1k:A (2.1) BS03 DPF 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104363 2r1l:A (1.95) BS01 FE2 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104364 2r1l:A (1.95) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104365 2r1l:A (1.95) BS03 DPJ 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104366 2r1m:A (2.5) BS01 FE2 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104367 2r1m:A (2.5) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104368 2r1m:A (2.5) BS03 DPF 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104369 2r1n:A (1.7) BS01 FE2 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104370 2r1n:A (1.7) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104371 2r1n:A (1.7) BS03 EPL 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104372 2r1p:A (1.8) BS01 FE2 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104373 2r1p:A (1.8) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104374 2r1p:A (1.8) BS03 DPJ 3.1.8.1 GO:0008270 ... Q93LD7 18082180
    104375 2r1r:A (3.0) BS01 peptide 1.17.4.1 GO:0004748 ... P00452 9309223
    104376 2r1r:A (3.0) BS02 peptide 1.17.4.1 GO:0004748 ... P00452 9309223
    104377 2r1r:A (3.0) BS03 TTP 1.17.4.1 GO:0004748 ... P00452 9309223
    104378 2r1r:B (3.0) BS01 peptide 1.17.4.1 GO:0004748 ... P00452 9309223
    104379 2r1r:B (3.0) BS02 TTP 1.17.4.1 GO:0004748 ... P00452 9309223
    104380 2r1r:C (3.0) BS01 peptide 1.17.4.1 GO:0004748 ... P00452 9309223
    104381 2r1r:C (3.0) BS02 TTP 1.17.4.1 GO:0004748 ... P00452 9309223
    104382 2r1w:A (1.7) BS01 KDA ? GO:0002250 ... P01837 18272175
    104383 2r1w:A (1.7) BS02 KDB ? GO:0002250 ... P01837 18272175
    104384 2r1w:A (1.7) BS03 ZN ? GO:0002250 ... P01837 18272175
    104385 2r1w:B (1.7) BS01 KDA ? GO:0005576 ... A2NU21 18272175
    104386 2r1x:A (1.6) BS01 KDA ? N/A Q52L64 18272175
    104387 2r1x:A (1.6) BS02 ZN ? N/A Q52L64 18272175
    104388 2r1x:B (1.6) BS01 KDA ? GO:0005576 ... A2NU21 18272175
    104389 2r1y:A (1.6) BS01 KDO ? GO:0002250 ... P01837 18272175
    104390 2r1y:A (1.6) BS02 MG ? GO:0002250 ... P01837 18272175
    104391 2r1y:A (1.6) BS03 ZN ? GO:0002250 ... P01837 18272175
    104392 2r1y:B (1.6) BS01 KDR ? GO:0005576 ... A2NU21 18272175
    104393 2r1y:B (1.6) BS02 KDO ? GO:0005576 ... A2NU21 18272175
    104394 2r23:A (1.65) BS01 KO1 ? GO:0002250 ... P01837 18272175
    104395 2r23:B (1.65) BS01 KDA N/A N/A N/A 18272175
    104396 2r23:B (1.65) BS02 KO1 N/A N/A N/A 18272175
    104397 2r24:A (1.752) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 18250329
    104398 2r24:A (1.752) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 18250329 BindingDB: IC50=30nM
    104399 2r25:B (1.7) BS01 MG 2.7.13.3 GO:0000160 ... P39928 18076904
    104400 2r25:B (1.7) BS02 BEF 2.7.13.3 GO:0000160 ... P39928 18076904

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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