SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105801 2rka:A (1.95) BS03 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105802 2rka:C (1.95) BS01 PGA 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=1mM
    105803 2rka:C (1.95) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105804 2rka:C (1.95) BS03 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105805 2rkb:A (2.8) BS01 PLP 4.3.1.17
    4.3.1.19
    GO:0003941 ... Q96GA7 18342636
    105806 2rkb:B (2.8) BS01 PLP 4.3.1.17
    4.3.1.19
    GO:0003941 ... Q96GA7 18342636
    105807 2rkb:C (2.8) BS01 PLP 4.3.1.17
    4.3.1.19
    GO:0003941 ... Q96GA7 18342636
    105808 2rkb:D (2.8) BS01 PLP 4.3.1.17
    4.3.1.19
    GO:0003941 ... Q96GA7 18342636
    105809 2rkb:E (2.8) BS01 PLP 4.3.1.17
    4.3.1.19
    GO:0003941 ... Q96GA7 18342636
    105810 2rkd:A (1.9) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105811 2rkd:A (1.9) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105812 2rkd:A (1.9) BS03 3PP 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=1.9mM
    105813 2rke:A (1.8) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105814 2rke:A (1.8) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105815 2rke:A (1.8) BS03 SAT 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=82.5uM
    105816 2rkf:A (1.8) BS01 AB1 3.1.26.13 GO:0004190 ... Q90JJ9 18400858 MOAD: Ki=0.83nM
    105817 2rkf:B (1.8) BS01 AB1 3.1.26.13 GO:0004190 ... Q90JJ9 18400858
    105818 2rkg:A (1.8) BS01 AB1 3.1.26.13 GO:0004190 ... A0F6C5 18400858
    105819 2rkg:B (1.8) BS01 AB1 3.1.26.13 GO:0004190 ... A0F6C5 18400858 MOAD: Ki=8.2nM
    105820 2rki:A (2.3) BS01 TT1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P04585 18083512
    105821 2rkj:B (4.5) BS01 rna 6.1.1.1 GO:0000166 ... P12063 18172503
    105822 2rkj:F (4.5) BS01 rna 6.1.1.1 GO:0000166 ... P12063 18172503
    105823 2rkj:J (4.5) BS01 rna 6.1.1.1 GO:0000166 ... P12063 18172503
    105824 2rkj:N (4.5) BS01 rna 6.1.1.1 GO:0000166 ... P12063 18172503
    105825 2rkm:A (1.8) BS01 LYS ? GO:0015833 ... P06202 9245406
    105826 2rkm:A (1.8) BS02 LYS ? GO:0015833 ... P06202 9245406
    105827 2rkn:A (1.6) BS01 ZN ? GO:0005504 ... Q8W453 18552128
    105828 2rkn:A (1.6) BS02 ZN ? GO:0005504 ... Q8W453 18552128
    105829 2rkn:A (1.6) BS03 LP3 ? GO:0005504 ... Q8W453 18552128 MOAD: Kd=0.06uM
    105830 2rkn:A (1.6) BS04 LP3 ? GO:0005504 ... Q8W453 18552128 MOAD: Kd=0.06uM
    105831 2rku:A (1.95) BS01 ZN 2.7.11.21 GO:0004672 ... P53350 18005335
    105832 2rku:A (1.95) BS02 R78 2.7.11.21 GO:0004672 ... P53350 18005335 MOAD: ic50=8nM
    BindingDB: IC50=0.830000nM, Kd=0.190000nM, Ki=<1nM
    105833 2rkv:A (1.6) BS01 COA ? N/A O42692 17923480
    105834 2rkv:A (1.6) BS02 ZBA ? N/A O42692 17923480
    105835 2rky:A (1.8) BS01 peptide ? GO:0005576 ... P02751 18713862
    105836 2rky:C (1.8) BS01 peptide ? GO:0005576 ... P02751 18713862
    105837 2rkz:A (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105838 2rkz:B (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105839 2rkz:C (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105840 2rkz:D (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105841 2rkz:D (2.0) BS02 peptide ? GO:0005576 ... P02751 18713862
    105842 2rkz:E (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105843 2rkz:F (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105844 2rl0:A (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105845 2rl0:B (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105846 2rl0:D (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105847 2rl0:F (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105848 2rl0:I (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105849 2rl0:K (2.0) BS01 peptide ? GO:0005576 ... P02751 18713862
    105850 2rl1:A (2.2) BS01 UD1 2.5.1.7 GO:0003824 ... P45025 18247346
    105851 2rl2:A (2.3) BS01 GG6 2.5.1.7 GO:0003824 ... P45025 18247346
    105852 2rl2:A (2.3) BS02 UD1 2.5.1.7 GO:0003824 ... P45025 18247346
    105853 2rl5:A (2.65) BS01 2RL 2.7.10.1 GO:0004672 ... P35968 18311900 BindingDB: IC50=0.5nM
    105854 2rl8:A (1.45) BS01 M6D ? GO:0005768 ... P11456 18272523
    105855 2rl8:B (1.45) BS01 M6D ? GO:0005768 ... P11456 18272523
    105856 2rl9:A (2.4) BS01 MAN ? GO:0005768 ... P11456 18272523
    105857 2rl9:A (2.4) BS02 M6P ? GO:0005768 ... P11456 18272523
    105858 2rl9:B (2.4) BS01 MAN ? GO:0005768 ... P11456 18272523
    105859 2rl9:B (2.4) BS02 M6P ? GO:0005768 ... P11456 18272523
    105860 2rla:A (3.0) BS01 MN 3.5.3.1 GO:0000050 ... P07824 9265637
    105861 2rla:B (3.0) BS01 MN 3.5.3.1 GO:0000050 ... P07824 9265637
    105862 2rla:C (3.0) BS01 MN 3.5.3.1 GO:0000050 ... P07824 9265637
    105863 2rlb:A (1.75) BS01 M6D ? GO:0005768 ... P11456 18272523
    105864 2rlb:B (1.75) BS01 M6D ? GO:0005768 ... P11456 18272523
    105865 2rlc:A (1.8) BS01 GLY 2.3.1.-
    3.5.1.-
    3.5.1.24
    GO:0006699 ... P54965 N/A
    105866 2rld:A (1.7) BS01 CA ? N/A Q8AAW0 N/A
    105867 2rld:C (1.7) BS01 CA ? N/A Q8AAW0 N/A
    105868 2rlf:C (-1.00) BS01 RIM ? GO:0015078 ... P0DOF5 18235503
    105869 2rlf:C (-1.00) BS02 RIM ? GO:0015078 ... P0DOF5 18235503
    105870 2rli:A (-1.00) BS01 CU1 ? N/A O43819 17850752
    105871 2rln:E (1.85) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 8031793
    105872 2rly:W (-1.00) BS01 peptide ? GO:0070063 ... Q8CGF7 17915251
    105873 2rm0:W (-1.00) BS01 peptide ? GO:0070063 ... Q8CGF7 17915251
    105874 2rm2:1 (3.0) BS01 W43 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    105875 2rma:A (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105876 2rma:A (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105877 2rma:A (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105878 2rma:C (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105879 2rma:C (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105880 2rma:C (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105881 2rma:E (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105882 2rma:E (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105883 2rma:E (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105884 2rma:G (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105885 2rma:G (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105886 2rma:G (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105887 2rma:I (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105888 2rma:I (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105889 2rma:I (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105890 2rma:K (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105891 2rma:K (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105892 2rma:K (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105893 2rma:M (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105894 2rma:M (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105895 2rma:M (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105896 2rma:O (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105897 2rma:O (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105898 2rma:O (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105899 2rma:Q (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105900 2rma:Q (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105901 2rma:Q (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105902 2rma:S (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105903 2rma:S (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105904 2rma:S (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105905 2rmb:A (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105906 2rmb:A (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105907 2rmb:A (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105908 2rmb:C (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105909 2rmb:C (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105910 2rmb:C (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105911 2rmb:E (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105912 2rmb:E (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105913 2rmb:E (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105914 2rmb:G (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105915 2rmb:G (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105916 2rmb:G (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105917 2rmb:I (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105918 2rmb:I (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105919 2rmb:I (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105920 2rmb:K (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105921 2rmb:K (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105922 2rmb:K (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105923 2rmb:M (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105924 2rmb:M (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105925 2rmb:M (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105926 2rmb:O (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105927 2rmb:O (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105928 2rmb:O (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105929 2rmb:Q (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105930 2rmb:Q (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105931 2rmb:Q (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105932 2rmb:S (2.1) BS01 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105933 2rmb:S (2.1) BS02 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105934 2rmb:S (2.1) BS03 peptide 5.2.1.8 GO:0000413 ... P62937 8075981
    105935 2rmc:A (1.64) BS01 peptide 5.2.1.8 GO:0000413 ... P30412 8265636
    105936 2rmc:C (1.64) BS01 peptide 5.2.1.8 GO:0000413 ... P30412 8265636
    105937 2rmc:E (1.64) BS01 peptide 5.2.1.8 GO:0000413 ... P30412 8265636
    105938 2rmc:G (1.64) BS01 peptide 5.2.1.8 GO:0000413 ... P30412 8265636
    105939 2rmk:A (-1.00) BS01 MG 3.6.5.2 GO:0000242 ... P63000 18006505
    105940 2rmn:A (-1.00) BS01 ZN ? GO:0000976 ... Q9H3D4 27225672
    105941 2rmp:A (2.7) BS01 peptide 3.4.23.23 GO:0004190 ... P00799 10089458
    105942 2rmx:A (-1.00) BS01 peptide 3.1.3.48 N/A P29350 N/A
    105943 2rn5:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 18491415
    105944 2rnb:A (-1.00) BS01 CU1 ? GO:0005507 ... Q14061 18093982
    105945 2rnf:A (2.4) BS01 UM3 3.1.27.- GO:0003676 ... P34096 9878400
    105946 2rnf:B (2.4) BS01 UM3 3.1.27.- GO:0003676 ... P34096 9878400
    105947 2rns:A (1.6) BS01 SO4 4.6.1.18 GO:0003676 ... P61823 1463719
    105948 2rnt:A (1.8) BS01 GPG 4.6.1.24 GO:0001411 ... P00651 2541256
    105949 2rnw:A (-1.00) BS01 peptide 2.3.1.48
    2.3.1.57
    GO:0004402 ... Q92831 18400184
    105950 2rnx:A (-1.00) BS01 peptide 2.3.1.48
    2.3.1.57
    GO:0004402 ... Q92831 18400184
    105951 2rny:A (-1.00) BS01 peptide 2.3.1.-
    2.3.1.48
    N/A Q92793 18400184
    105952 2ro1:A (-1.00) BS01 ZN 2.3.2.27 GO:0003714 ... Q13263 18488044
    105953 2ro1:A (-1.00) BS02 ZN 2.3.2.27 GO:0003714 ... Q13263 18488044
    105954 2ro8:A (-1.00) BS01 CA ? GO:0005509 ... Q6LEG8 18347016
    105955 2ro8:A (-1.00) BS02 CA ? GO:0005509 ... Q6LEG8 18347016
    105956 2ro9:A (-1.00) BS01 CA ? GO:0005509 ... P62163 18347016
    105957 2ro9:A (-1.00) BS02 CA ? GO:0005509 ... P62163 18347016
    105958 2roa:A (-1.00) BS01 CA ? GO:0005509 ... Q39890 18347016
    105959 2roa:A (-1.00) BS02 CA ? GO:0005509 ... Q39890 18347016
    105960 2rob:A (-1.00) BS01 CA ? GO:0005509 ... Q39890 18347016
    105961 2rob:A (-1.00) BS02 CA ? GO:0005509 ... Q39890 18347016
    105962 2roc:A (-1.00) BS01 peptide ? GO:0042981 ... P97287 18589438
    105963 2rod:A (-1.00) BS01 peptide ? GO:0042981 ... P97287 18589438
    105964 2rok:A (-1.00) BS01 7MG 3.1.13.4 GO:0003676 ... Q8VDG3 18641416
    105965 2rok:A (-1.00) BS02 GDP 3.1.13.4 GO:0003676 ... Q8VDG3 18641416
    105966 2rol:A (-1.00) BS01 peptide ? N/A Q8TE68 18644376
    105967 2rom:A (2.0) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 9334748
    105968 2ror:A (-1.00) BS01 peptide ? N/A P15498 N/A
    105969 2row:A (-1.00) BS01 ZN 2.7.11.1 N/A Q62868 N/A
    105970 2row:A (-1.00) BS02 ZN 2.7.11.1 N/A Q62868 N/A
    105971 2rox:A (2.0) BS01 T44 ? GO:0001523 ... P02766 15299640 BindingDB: IC50=10500nM
    105972 2rox:B (2.0) BS01 T44 ? GO:0001523 ... P02766 15299640 BindingDB: IC50=10500nM
    105973 2roy:A (2.2) BS01 P28 ? GO:0001523 ... P02766 15299640
    105974 2roy:B (2.2) BS01 P28 ? GO:0001523 ... P02766 15299640
    105975 2rpc:A (-1.00) BS01 ZN ? GO:0000977 ... O60481 18716025
    105976 2rpc:A (-1.00) BS02 ZN ? GO:0000977 ... O60481 18716025
    105977 2rpc:A (-1.00) BS03 ZN ? GO:0000977 ... O60481 18716025
    105978 2rpc:A (-1.00) BS04 ZN ? GO:0000977 ... O60481 18716025
    105979 2rpn:A (-1.00) BS01 peptide ? N/A P15891 19590096
    105980 2rpp:A (-1.00) BS01 ZN ? GO:0046872 ... Q5VZF2 19177353
    105981 2rpp:A (-1.00) BS02 ZN ? GO:0046872 ... Q5VZF2 19177353
    105982 2rpq:A (-1.00) BS01 peptide ? GO:0003723 ... P61956 18842587
    105983 2rpr:A (-1.00) BS01 ZN ? N/A Q4VC44 N/A
    105984 2rpz:A (-1.00) BS01 ZN 3.5.4.36 N/A Q9WV35 N/A
    105985 2rqa:A (-1.00) BS01 ZN 3.6.4.13 N/A Q96C10 19380577
    105986 2rqb:A (-1.00) BS01 ZN 3.6.4.13 N/A Q9BYX4 19380577
    105987 2rqc:A (-1.00) BS01 rna ? GO:0003676 ... Q92879 19553194
    105988 2rqf:A (-1.00) BS01 JH3 ? N/A Q9U556 22355650
    105989 2rqg:B (-1.00) BS01 peptide ? GO:0003723 ... P11940 N/A
    105990 2rqh:B (-1.00) BS01 peptide ? GO:0003723 ... P11940 N/A
    105991 2rqu:A (-1.00) BS01 peptide ? GO:0005096 ... Q9ULH1 20509626
    105992 2rqw:A (-1.00) BS01 peptide ? N/A P29366 20410294
    105993 2rqz:A (-1.00) BS01 FUC ? GO:0005509 ... Q01705 20883017
    105994 2rr1:1 (3.0) BS01 W8R 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    105995 2rr2:A (-1.00) BS01 FUC ? GO:0005509 ... Q01705 20883017
    105996 2rr4:A (-1.00) BS01 peptide ? GO:0008270 ... Q9H0M4 20826339
    105997 2rr4:A (-1.00) BS02 ZN ? GO:0008270 ... Q9H0M4 20826339
    105998 2rra:A (-1.00) BS01 rna ? GO:0003676 ... P62995 20926394
    105999 2rs1:1 (3.0) BS01 W84 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 2558377
    106000 2rs2:A (-1.00) BS01 rna ? GO:0003676 ... Q61474 22140116

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).