SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    106201 2tep:B (2.5) BS01 GAL ? GO:0030246 ... P02872 N/A
    106202 2tep:B (2.5) BS02 CA ? GO:0030246 ... P02872 N/A
    106203 2tep:B (2.5) BS03 MN ? GO:0030246 ... P02872 N/A
    106204 2tep:C (2.5) BS01 GAL ? GO:0030246 ... P02872 N/A
    106205 2tep:C (2.5) BS02 CA ? GO:0030246 ... P02872 N/A
    106206 2tep:C (2.5) BS03 MN ? GO:0030246 ... P02872 N/A
    106207 2tep:D (2.5) BS01 GAL ? GO:0030246 ... P02872 N/A
    106208 2tep:D (2.5) BS02 CA ? GO:0030246 ... P02872 N/A
    106209 2tep:D (2.5) BS03 MN ? GO:0030246 ... P02872 N/A
    106210 2tga:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    106211 2tgd:A (2.1) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    106212 2tgd:A (2.1) BS02 DFP 3.4.21.4 GO:0004175 ... P00760 N/A
    106213 2tgp:Z (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    106214 2tgt:A (1.7) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    106215 2thf:B (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10051558
    106216 2thf:B (2.1) BS02 0G6 3.4.21.5 GO:0004252 ... P00734 10051558
    106217 2tio:A (1.93) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9920392
    106218 2tio:A (1.93) BS02 SO4 3.4.21.4 GO:0004175 ... P00760 9920392
    106219 2tio:A (1.93) BS03 BEN 3.4.21.4 GO:0004175 ... P00760 9920392
    106220 2tio:A (1.93) BS04 HEX 3.4.21.4 GO:0004175 ... P00760 9920392
    106221 2tli:A (1.95) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 10651278
    106222 2tli:A (1.95) BS02 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106223 2tli:A (1.95) BS03 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106224 2tli:A (1.95) BS04 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106225 2tli:A (1.95) BS05 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106226 2tlx:A (1.65) BS01 VAL 3.4.24.27 GO:0004222 ... P00800 10651278
    106227 2tlx:A (1.65) BS02 LYS 3.4.24.27 GO:0004222 ... P00800 10651278
    106228 2tlx:A (1.65) BS03 ZN 3.4.24.27 GO:0004222 ... P00800 10651278
    106229 2tlx:A (1.65) BS04 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106230 2tlx:A (1.65) BS05 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106231 2tlx:A (1.65) BS06 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106232 2tlx:A (1.65) BS07 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    106233 2tmd:A (2.4) BS01 SF4 1.5.8.2 GO:0010181 ... P16099 1551870
    106234 2tmd:A (2.4) BS02 FMN 1.5.8.2 GO:0010181 ... P16099 1551870
    106235 2tmd:A (2.4) BS03 ADP 1.5.8.2 GO:0010181 ... P16099 1551870
    106236 2tmd:B (2.4) BS01 SF4 1.5.8.2 GO:0010181 ... P16099 1551870
    106237 2tmd:B (2.4) BS02 FMN 1.5.8.2 GO:0010181 ... P16099 1551870
    106238 2tmd:B (2.4) BS03 ADP 1.5.8.2 GO:0010181 ... P16099 1551870
    106239 2tmk:A (2.4) BS01 ATM 2.7.4.9 GO:0004550 ... P00572 9253404
    106240 2tmk:B (2.4) BS01 ATM 2.7.4.9 GO:0004550 ... P00572 9253404
    106241 2tmn:E (1.6) BS01 CA 3.4.24.27 GO:0004222 ... P00800 3709536
    106242 2tmn:E (1.6) BS02 CA 3.4.24.27 GO:0004222 ... P00800 3709536
    106243 2tmn:E (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 3709536
    106244 2tmn:E (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 3709536
    106245 2tmn:E (1.6) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 3709536
    106246 2tmn:E (1.6) BS06 0FA 3.4.24.27 GO:0004222 ... P00800 3709536 MOAD: Ki=1.3uM
    BindingDB: Ki=21300nM, Kd=1288nM
    106247 2tmv:P (2.9) BS01 rna ? GO:0005198 ... P69687 2769760
    106248 2tn4:A (2.0) BS01 CA ? GO:0005509 ... P02586 9438870
    106249 2tn4:A (2.0) BS02 CA ? GO:0005509 ... P02586 9438870
    106250 2tn4:A (2.0) BS03 CA ? GO:0005509 ... P02586 9438870
    106251 2tn4:A (2.0) BS04 CA ? GO:0005509 ... P02586 9438870
    106252 2tn4:A (2.0) BS05 CA ? GO:0005509 ... P02586 9438870
    106253 2tod:A (2.0) BS01 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106254 2tod:A (2.0) BS02 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    106255 2tod:A (2.0) BS03 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106256 2tod:B (2.0) BS01 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    106257 2tod:B (2.0) BS02 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106258 2tod:C (2.0) BS01 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106259 2tod:C (2.0) BS02 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    106260 2tod:D (2.0) BS01 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106261 2tod:D (2.0) BS02 PLP 4.1.1.17 GO:0003824 ... P07805 10563800
    106262 2tod:D (2.0) BS03 DMO 4.1.1.17 GO:0003824 ... P07805 10563800
    106263 2toh:A (2.3) BS01 FE 1.14.16.2 GO:0004497 ... P04177 9753429
    106264 2toh:A (2.3) BS02 HBI 1.14.16.2 GO:0004497 ... P04177 9753429 MOAD: Ki=70uM
    106265 2tpi:Z (2.1) BS01 ILE 3.4.21.4 GO:0004175 ... P00760 N/A
    106266 2tpi:Z (2.1) BS02 VAL 3.4.21.4 GO:0004175 ... P00760 N/A
    106267 2tpl:B (2.5) BS01 HPP 4.1.99.2 GO:0006520 ... P31013 9174368 MOAD: Ki=1.25mM
    106268 2tpr:A (2.4) BS01 FAD 1.8.1.12 GO:0004362 ... P39040 1924336
    106269 2tpr:B (2.4) BS01 FAD 1.8.1.12 GO:0004362 ... P39040 1924336
    106270 2tps:A (1.25) BS01 MG 2.5.1.3 GO:0000287 ... P39594 10350464
    106271 2tps:A (1.25) BS02 TPS 2.5.1.3 GO:0000287 ... P39594 10350464
    106272 2tps:A (1.25) BS03 POP 2.5.1.3 GO:0000287 ... P39594 10350464
    106273 2tps:B (1.25) BS01 MG 2.5.1.3 GO:0000287 ... P39594 10350464
    106274 2tps:B (1.25) BS02 TPS 2.5.1.3 GO:0000287 ... P39594 10350464
    106275 2tps:B (1.25) BS03 POP 2.5.1.3 GO:0000287 ... P39594 10350464
    106276 2trm:A (2.8) BS01 CA 3.4.21.4 GO:0004252 ... P00763 3112942
    106277 2trs:A (2.04) BS01 IPL 4.2.1.20 GO:0000162 ... P00929 9201907
    106278 2trs:B (2.04) BS01 PLS 4.2.1.20 GO:0000162 ... P0A2K1 9201907
    106279 2trt:A (2.5) BS01 TAC ? GO:0000976 ... P0ACT4 8153629
    106280 2trx:A (1.68) BS01 CU ? GO:0005515 ... P0AA25 2181145
    106281 2trx:B (1.68) BS01 CU ? GO:0005515 ... P0AA25 2181145
    106282 2tsa:A (2.2) BS01 CU ? GO:0005507 ... P00282 15299604
    106283 2tsa:B (2.2) BS01 CU ? GO:0005507 ... P00282 15299604
    106284 2tsa:C (2.2) BS01 CU ? GO:0005507 ... P00282 15299604
    106285 2tsa:D (2.2) BS01 CU ? GO:0005507 ... P00282 15299604
    106286 2tsb:A (2.3) BS01 AZI ? GO:0005507 ... P00282 15299604
    106287 2tsb:A (2.3) BS02 CU ? GO:0005507 ... P00282 15299604
    106288 2tsb:B (2.3) BS01 AZI ? GO:0005507 ... P00282 15299604
    106289 2tsb:B (2.3) BS02 CU ? GO:0005507 ... P00282 15299604
    106290 2tsb:C (2.3) BS01 AZI ? GO:0005507 ... P00282 15299604
    106291 2tsb:C (2.3) BS02 CU ? GO:0005507 ... P00282 15299604
    106292 2tsb:D (2.3) BS01 AZI ? GO:0005507 ... P00282 15299604
    106293 2tsb:D (2.3) BS02 CU ? GO:0005507 ... P00282 15299604
    106294 2tsc:A (1.97) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 2223754
    106295 2tsc:A (1.97) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 2223754
    106296 2tsc:B (1.97) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 2223754
    106297 2tsc:B (1.97) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 2223754
    106298 2tsr:A (2.6) BS01 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106299 2tsr:A (2.6) BS02 D16 2.1.1.45 GO:0003729 ... P45352 9894005
    106300 2tsr:A (2.6) BS03 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106301 2tsr:B (2.6) BS01 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106302 2tsr:B (2.6) BS02 D16 2.1.1.45 GO:0003729 ... P45352 9894005
    106303 2tsr:C (2.6) BS01 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106304 2tsr:C (2.6) BS02 D16 2.1.1.45 GO:0003729 ... P45352 9894005
    106305 2tsr:C (2.6) BS03 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106306 2tsr:D (2.6) BS01 UMP 2.1.1.45 GO:0003729 ... P45352 9894005
    106307 2tsr:D (2.6) BS02 D16 2.1.1.45 GO:0003729 ... P45352 9894005
    106308 2tsy:A (2.5) BS01 G3P 4.2.1.20 GO:0000162 ... P00929 9201907
    106309 2tsy:B (2.5) BS01 PLS 4.2.1.20 GO:0000162 ... P0A2K1 9201907
    106310 2tys:B (1.9) BS01 PLT 4.2.1.20 GO:0000162 ... P0A2K1 9201907
    106311 2uag:A (1.7) BS01 MG 6.3.2.9 GO:0005515 ... P14900 10356330
    106312 2uag:A (1.7) BS02 UMA 6.3.2.9 GO:0005515 ... P14900 10356330
    106313 2uag:A (1.7) BS03 ADP 6.3.2.9 GO:0005515 ... P14900 10356330
    106314 2ubp:C (2.0) BS01 NI 3.5.1.5 GO:0005737 ... P41020 10368287
    106315 2ubp:C (2.0) BS02 NI 3.5.1.5 GO:0005737 ... P41020 10368287
    106316 2udp:A (1.8) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 8931134
    106317 2udp:A (1.8) BS02 UPP 5.1.3.2 GO:0003978 ... P09147 8931134
    106318 2udp:B (1.8) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 8931134
    106319 2udp:B (1.8) BS02 UPP 5.1.3.2 GO:0003978 ... P09147 8931134
    106320 2ukd:A (2.2) BS01 ADP 2.7.4.14 GO:0000287 ... P20425 9280438
    106321 2ukd:A (2.2) BS02 C5P 2.7.4.14 GO:0000287 ... P20425 9280438
    106322 2up1:A (2.1) BS01 dna ? GO:0003676 ... P09651 10323862
    106323 2upj:A (3.0) BS01 U02 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 7658450
    106324 2upj:B (3.0) BS01 U02 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 7658450
    106325 2ush:A (2.22) BS01 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106326 2ush:A (2.22) BS02 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106327 2ush:A (2.22) BS03 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106328 2ush:A (2.22) BS04 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106329 2ush:B (2.22) BS01 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106330 2ush:B (2.22) BS02 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106331 2ush:B (2.22) BS03 ZN 3.1.3.5
    3.6.1.45
    GO:0000166 ... P07024 10331872
    106332 2usn:A (2.2) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 9792098
    106333 2usn:A (2.2) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 9792098
    106334 2usn:A (2.2) BS03 CA 3.4.24.17 GO:0004222 ... P08254 9792098
    106335 2usn:A (2.2) BS04 CA 3.4.24.17 GO:0004222 ... P08254 9792098
    106336 2usn:A (2.2) BS05 CA 3.4.24.17 GO:0004222 ... P08254 9792098
    106337 2usn:A (2.2) BS06 IN8 3.4.24.17 GO:0004222 ... P08254 9792098 MOAD: Ki=0.31uM
    106338 2uu7:A (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106339 2uu7:B (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106340 2uu7:C (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106341 2uu7:D (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106342 2uu7:E (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106343 2uu7:F (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106344 2uu7:G (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106345 2uu7:H (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106346 2uu7:I (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106347 2uu7:J (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106348 2uu7:K (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106349 2uu7:L (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106350 2uu7:M (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106351 2uu7:N (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106352 2uu7:O (3.0) BS01 MG 2.3.1.225
    6.3.1.2
    GO:0003824 ... Q8HZM5 18005987
    106353 2uu8:A (0.94) BS01 CA ? GO:0030246 ... P02866 17642517
    106354 2uu9:B (3.1) BS01 rna ? GO:0003735 ... P80371 17496902
    106355 2uu9:B (3.1) BS02 MG ? GO:0003735 ... P80371 17496902
    106356 2uu9:C (3.1) BS01 rna ? GO:0003676 ... P80372 17496902
    106357 2uu9:D (3.1) BS01 rna ? GO:0003723 ... P80373 17496902
    106358 2uu9:E (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 17496902
    106359 2uu9:F (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 17496902
    106360 2uu9:G (3.1) BS01 rna ? GO:0000049 ... P17291 17496902
    106361 2uu9:H (3.1) BS01 rna ? GO:0003735 ... P0DOY9 17496902
    106362 2uu9:I (3.1) BS01 rna ? GO:0003723 ... P80374 17496902
    106363 2uu9:J (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 17496902
    106364 2uu9:K (3.1) BS01 rna ? GO:0003735 ... P80376 17496902
    106365 2uu9:L (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 17496902
    106366 2uu9:L (3.1) BS02 MG ? GO:0000049 ... Q5SHN3 17496902
    106367 2uu9:M (3.1) BS01 rna ? GO:0000049 ... P80377 17496902
    106368 2uu9:M (3.1) BS02 MG ? GO:0000049 ... P80377 17496902
    106369 2uu9:N (3.1) BS01 rna ? GO:0003735 ... P0DOY6 17496902
    106370 2uu9:N (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 17496902
    106371 2uu9:O (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 17496902
    106372 2uu9:P (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 17496902
    106373 2uu9:Q (3.1) BS01 rna ? GO:0003735 ... P0DOY7 17496902
    106374 2uu9:Q (3.1) BS02 MG ? GO:0003735 ... P0DOY7 17496902
    106375 2uu9:R (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 17496902
    106376 2uu9:S (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 17496902
    106377 2uu9:T (3.1) BS01 rna ? GO:0003723 ... P80380 17496902
    106378 2uua:B (2.9) BS01 rna ? GO:0003735 ... P80371 17496902
    106379 2uua:B (2.9) BS02 MG ? GO:0003735 ... P80371 17496902
    106380 2uua:C (2.9) BS01 rna ? GO:0003676 ... P80372 17496902
    106381 2uua:D (2.9) BS01 rna ? GO:0003723 ... P80373 17496902
    106382 2uua:D (2.9) BS02 MG ? GO:0003723 ... P80373 17496902
    106383 2uua:E (2.9) BS01 rna ? GO:0003723 ... Q5SHQ5 17496902
    106384 2uua:F (2.9) BS01 rna ? GO:0003735 ... Q5SLP8 17496902
    106385 2uua:G (2.9) BS01 rna ? GO:0000049 ... P17291 17496902
    106386 2uua:G (2.9) BS02 MG ? GO:0000049 ... P17291 17496902
    106387 2uua:H (2.9) BS01 rna ? GO:0003735 ... P0DOY9 17496902
    106388 2uua:H (2.9) BS02 MG ? GO:0003735 ... P0DOY9 17496902
    106389 2uua:H (2.9) BS03 MG ? GO:0003735 ... P0DOY9 17496902
    106390 2uua:I (2.9) BS01 rna ? GO:0003723 ... P80374 17496902
    106391 2uua:J (2.9) BS01 rna ? GO:0000049 ... Q5SHN7 17496902
    106392 2uua:K (2.9) BS01 rna ? GO:0003735 ... P80376 17496902
    106393 2uua:L (2.9) BS01 rna ? GO:0000049 ... Q5SHN3 17496902
    106394 2uua:L (2.9) BS02 MG ? GO:0000049 ... Q5SHN3 17496902
    106395 2uua:M (2.9) BS01 rna ? GO:0000049 ... P80377 17496902
    106396 2uua:M (2.9) BS02 MG ? GO:0000049 ... P80377 17496902
    106397 2uua:N (2.9) BS01 rna ? GO:0003735 ... P0DOY6 17496902
    106398 2uua:N (2.9) BS02 ZN ? GO:0003735 ... P0DOY6 17496902
    106399 2uua:O (2.9) BS01 rna ? GO:0003735 ... Q5SJ76 17496902
    106400 2uua:P (2.9) BS01 rna ? GO:0003735 ... Q5SJH3 17496902

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).