SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10801 1e6e:C (2.3) BS01 FAD 1.18.1.6 GO:0004324 ... P08165 11053423
    10802 1e6e:D (2.3) BS01 FES ? GO:0051536 ... P00257 11053423
    10803 1e6i:A (1.87) BS01 peptide 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q03330 11080160
    10804 1e6q:M (1.35) BS01 NTZ 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.7mM
    10805 1e6q:M (1.35) BS02 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10806 1e6q:M (1.35) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10807 1e6q:M (1.35) BS04 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10808 1e6r:A (2.5) BS01 AMI ? GO:0004553 ... Q54276 11481469
    10809 1e6r:B (2.5) BS01 AMI ? GO:0004553 ... Q54276 11481469
    10810 1e6s:M (1.35) BS01 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    10811 1e6s:M (1.35) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10812 1e6s:M (1.35) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10813 1e6s:M (1.35) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10814 1e6s:M (1.35) BS05 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10815 1e6u:A (1.45) BS01 NAP 1.1.1.271 GO:0005737 ... P32055 11021971
    10816 1e6u:A (1.45) BS02 UVW 1.1.1.271 GO:0005737 ... P32055 11021971
    10817 1e6v:A (2.7) BS01 F43 2.8.4.1 GO:0005737 ... Q49605 11023796
    10818 1e6v:A (2.7) BS02 TP7 2.8.4.1 GO:0005737 ... Q49605 11023796
    10819 1e6v:A (2.7) BS03 F43 2.8.4.1 GO:0005737 ... Q49605 11023796
    10820 1e6v:A (2.7) BS04 TP7 2.8.4.1 GO:0005737 ... Q49605 11023796
    10821 1e6v:A (2.7) BS05 COM 2.8.4.1 GO:0005737 ... Q49605 11023796
    10822 1e6v:B (2.7) BS01 TP7 2.8.4.1 GO:0015948 ... Q49601 11023796
    10823 1e6v:B (2.7) BS02 F43 2.8.4.1 GO:0015948 ... Q49601 11023796
    10824 1e6v:C (2.7) BS01 F43 2.8.4.1 GO:0015948 ... Q49604 11023796
    10825 1e6v:D (2.7) BS01 F43 2.8.4.1 GO:0005737 ... Q49605 11023796
    10826 1e6v:D (2.7) BS02 TP7 2.8.4.1 GO:0005737 ... Q49605 11023796
    10827 1e6v:D (2.7) BS03 COM 2.8.4.1 GO:0005737 ... Q49605 11023796
    10828 1e6v:D (2.7) BS04 F43 2.8.4.1 GO:0005737 ... Q49605 11023796
    10829 1e6v:D (2.7) BS05 TP7 2.8.4.1 GO:0005737 ... Q49605 11023796
    10830 1e6v:E (2.7) BS01 F43 2.8.4.1 GO:0015948 ... Q49601 11023796
    10831 1e6v:E (2.7) BS02 TP7 2.8.4.1 GO:0015948 ... Q49601 11023796
    10832 1e6v:F (2.7) BS01 F43 2.8.4.1 GO:0015948 ... Q49604 11023796
    10833 1e6w:A (1.7) BS01 NAD 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62
    GO:0000049 ... O70351 11023795
    10834 1e6w:B (1.7) BS01 NAD 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62
    GO:0000049 ... O70351 11023795
    10835 1e6w:C (1.7) BS01 NAD 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62
    GO:0000049 ... O70351 11023795
    10836 1e6w:C (1.7) BS02 EST 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62
    GO:0000049 ... O70351 11023795
    10837 1e6w:D (1.7) BS01 NAD 1.1.1.159
    1.1.1.178
    1.1.1.239
    1.1.1.35
    1.1.1.53
    1.1.1.62
    GO:0000049 ... O70351 11023795
    10838 1e6x:M (1.6) BS01 LGC 3.2.1.147 GO:0004553 ... P29736 10978344
    10839 1e6x:M (1.6) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10840 1e6x:M (1.6) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10841 1e6x:M (1.6) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10842 1e6y:A (1.6) BS01 F43 2.8.4.1 GO:0005737 ... P07962 11023796
    10843 1e6y:A (1.6) BS02 TP7 2.8.4.1 GO:0005737 ... P07962 11023796
    10844 1e6y:A (1.6) BS03 COM 2.8.4.1 GO:0005737 ... P07962 11023796
    10845 1e6y:A (1.6) BS04 F43 2.8.4.1 GO:0005737 ... P07962 11023796
    10846 1e6y:A (1.6) BS05 TP7 2.8.4.1 GO:0005737 ... P07962 11023796
    10847 1e6y:B (1.6) BS01 TP7 2.8.4.1 GO:0005737 ... P07955 11023796
    10848 1e6y:B (1.6) BS02 COM 2.8.4.1 GO:0005737 ... P07955 11023796
    10849 1e6y:B (1.6) BS03 F43 2.8.4.1 GO:0005737 ... P07955 11023796
    10850 1e6y:C (1.6) BS01 F43 2.8.4.1 GO:0005737 ... P07964 11023796
    10851 1e6y:D (1.6) BS01 F43 2.8.4.1 GO:0005737 ... P07962 11023796
    10852 1e6y:D (1.6) BS02 TP7 2.8.4.1 GO:0005737 ... P07962 11023796
    10853 1e6y:D (1.6) BS03 F43 2.8.4.1 GO:0005737 ... P07962 11023796
    10854 1e6y:D (1.6) BS04 TP7 2.8.4.1 GO:0005737 ... P07962 11023796
    10855 1e6y:D (1.6) BS05 COM 2.8.4.1 GO:0005737 ... P07962 11023796
    10856 1e6y:E (1.6) BS01 F43 2.8.4.1 GO:0005737 ... P07955 11023796
    10857 1e6y:E (1.6) BS02 TP7 2.8.4.1 GO:0005737 ... P07955 11023796
    10858 1e6y:E (1.6) BS03 COM 2.8.4.1 GO:0005737 ... P07955 11023796
    10859 1e6y:F (1.6) BS01 F43 2.8.4.1 GO:0005737 ... P07964 11023796
    10860 1e6z:A (1.99) BS01 NGO 3.2.1.14 GO:0004553 ... Q54276 11481469
    10861 1e6z:B (1.99) BS01 NGO 3.2.1.14 GO:0004553 ... Q54276 11481469
    10862 1e70:M (1.65) BS01 G2F 3.2.1.147 GO:0004553 ... P29736 10978344
    10863 1e70:M (1.65) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10864 1e70:M (1.65) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10865 1e70:M (1.65) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10866 1e70:M (1.65) BS05 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10867 1e71:M (1.5) BS01 ASC 3.2.1.147 GO:0004553 ... P29736 10978344
    10868 1e71:M (1.5) BS02 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10869 1e71:M (1.5) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10870 1e71:M (1.5) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10871 1e71:M (1.5) BS05 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10872 1e71:M (1.5) BS06 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10873 1e72:M (1.6) BS01 ASC 3.2.1.147 GO:0004553 ... P29736 10978344
    10874 1e72:M (1.6) BS02 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    10875 1e72:M (1.6) BS03 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10876 1e72:M (1.6) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10877 1e72:M (1.6) BS05 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10878 1e73:M (1.5) BS01 ASC 3.2.1.147 GO:0004553 ... P29736 10978344
    10879 1e73:M (1.5) BS02 G2F 3.2.1.147 GO:0004553 ... P29736 10978344
    10880 1e73:M (1.5) BS03 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10881 1e73:M (1.5) BS04 SO4 3.2.1.147 GO:0004553 ... P29736 10978344
    10882 1e73:M (1.5) BS05 ZN 3.2.1.147 GO:0004553 ... P29736 10978344
    10883 1e77:A (2.69) BS01 BG6 1.1.1.363 GO:0004345 ... P11411 11106478
    10884 1e79:A (2.4) BS01 ATP 3.6.1.34 GO:0005515 ... P19483 11062563
    10885 1e79:B (2.4) BS01 ADP 3.6.1.34 GO:0005515 ... P19483 11062563
    10886 1e79:C (2.4) BS01 ATP 3.6.1.34 GO:0005515 ... P19483 11062563
    10887 1e79:D (2.4) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 11062563
    10888 1e79:D (2.4) BS02 DCW 7.1.2.2 GO:0005515 ... P00829 11062563
    10889 1e79:F (2.4) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 11062563
    10890 1e7a:A (2.2) BS01 PFL ? GO:0003677 ... P02768 10940303
    10891 1e7a:A (2.2) BS02 PFL ? GO:0003677 ... P02768 10940303
    10892 1e7a:B (2.2) BS01 PFL ? GO:0003677 ... P02768 10940303
    10893 1e7a:B (2.2) BS02 PFL ? GO:0003677 ... P02768 10940303
    10894 1e7b:A (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10895 1e7b:A (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10896 1e7b:B (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10897 1e7b:B (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10898 1e7b:B (2.38) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10899 1e7c:A (2.4) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10900 1e7c:A (2.4) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10901 1e7c:A (2.4) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10902 1e7c:A (2.4) BS04 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10903 1e7c:A (2.4) BS05 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    10904 1e7d:A (2.8) BS01 ZN 3.1.-.- GO:0004518 ... P13340 11327769
    10905 1e7d:A (2.8) BS02 CA 3.1.-.- GO:0004518 ... P13340 11327769
    10906 1e7d:B (2.8) BS01 ZN 3.1.-.- GO:0004518 ... P13340 11327769
    10907 1e7d:B (2.8) BS02 CA 3.1.-.- GO:0004518 ... P13340 11327769
    10908 1e7j:A () BS01 dna ? N/A N/A N/A
    10909 1e7j:A () BS02 dna ? N/A N/A N/A
    10910 1e7k:A (2.9) BS01 rna ? GO:0000244 ... P55769 11163207
    10911 1e7k:B (2.9) BS01 rna ? GO:0000244 ... P55769 11163207
    10912 1e7l:A (1.32) BS01 ZN 3.1.-.- GO:0004518 ... P13340 11327769
    10913 1e7l:B (1.32) BS01 ZN 3.1.-.- GO:0004518 ... P13340 11327769
    10914 1e7p:A (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    10915 1e7p:B (3.1) BS01 FES 1.3.5.1 GO:0005886 ... P17596 11248702
    10916 1e7p:B (3.1) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 11248702
    10917 1e7p:B (3.1) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 11248702
    10918 1e7p:C (3.1) BS01 HEM ? GO:0005886 ... P17413 11248702
    10919 1e7p:C (3.1) BS02 HEM ? GO:0005886 ... P17413 11248702
    10920 1e7p:D (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    10921 1e7p:E (3.1) BS01 FES 1.3.5.1 GO:0005886 ... P17596 11248702
    10922 1e7p:E (3.1) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 11248702
    10923 1e7p:E (3.1) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 11248702
    10924 1e7p:F (3.1) BS01 HEM ? GO:0005886 ... P17413 11248702
    10925 1e7p:F (3.1) BS02 HEM ? GO:0005886 ... P17413 11248702
    10926 1e7p:G (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    10927 1e7p:H (3.1) BS01 FES 1.3.5.1 GO:0005886 ... P17596 11248702
    10928 1e7p:H (3.1) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 11248702
    10929 1e7p:H (3.1) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 11248702
    10930 1e7p:I (3.1) BS01 HEM ? GO:0005886 ... P17413 11248702
    10931 1e7p:I (3.1) BS02 HEM ? GO:0005886 ... P17413 11248702
    10932 1e7p:J (3.1) BS01 FAD 1.3.5.1 GO:0000104 ... P17412 11248702
    10933 1e7p:K (3.1) BS01 FES 1.3.5.1 GO:0005886 ... P17596 11248702
    10934 1e7p:K (3.1) BS02 F3S 1.3.5.1 GO:0005886 ... P17596 11248702
    10935 1e7p:K (3.1) BS03 SF4 1.3.5.1 GO:0005886 ... P17596 11248702
    10936 1e7p:L (3.1) BS01 HEM ? GO:0005886 ... P17413 11248702
    10937 1e7p:L (3.1) BS02 HEM ? GO:0005886 ... P17413 11248702
    10938 1e7q:A (1.6) BS01 NAP 1.1.1.271 GO:0005737 ... P32055 11021971
    10939 1e7q:A (1.6) BS02 UVW 1.1.1.271 GO:0005737 ... P32055 11021971
    10940 1e7r:A (1.6) BS01 NAP 1.1.1.271 GO:0005737 ... P32055 11021971
    10941 1e7r:A (1.6) BS02 UVW 1.1.1.271 GO:0005737 ... P32055 11021971
    10942 1e7s:A (1.5) BS01 NAP 1.1.1.271 GO:0005737 ... P32055 11021971
    10943 1e7s:A (1.5) BS02 UVW 1.1.1.271 GO:0005737 ... P32055 11021971
    10944 1e7u:A (2.0) BS01 KWT 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... O02697 11090628
    10945 1e7v:A (2.4) BS01 LY2 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... O02697 11090628
    10946 1e7w:A (1.75) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 11373620
    10947 1e7w:A (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    10948 1e7w:B (1.75) BS01 NDP 1.5.1.33 GO:0004155 ... Q01782 11373620
    10949 1e7w:B (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    10950 1e7y:A (2.48) BS01 BG6 1.1.1.363 GO:0004345 ... P11411 11106478
    10951 1e7y:A (2.48) BS02 NDP 1.1.1.363 GO:0004345 ... P11411 11106478
    10952 1e80:E (2.05) BS01 0GQ 3.4.23.22 GO:0004190 ... P11838 N/A
    10953 1e81:E (2.05) BS01 M91 3.4.23.22 GO:0004190 ... P11838 N/A
    10954 1e82:E (2.05) BS01 M90 3.4.23.22 GO:0004190 ... P11838 N/A
    10955 1e83:A (2.05) BS01 HEC ? GO:0005506 ... P00138 11060017
    10956 1e84:A (1.9) BS01 HEC ? GO:0005506 ... P00138 11060017
    10957 1e85:A (1.35) BS01 HEC ? GO:0005506 ... P00138 11060017
    10958 1e86:A (1.95) BS01 HEC ? GO:0005506 ... P00138 11060017
    10959 1e86:A (1.95) BS02 CMO ? GO:0005506 ... P00138 11060017
    10960 1e8a:A (1.95) BS01 CA ? GO:0002548 ... P80511 11134923
    10961 1e8a:A (1.95) BS02 CA ? GO:0002548 ... P80511 11134923
    10962 1e8a:B (1.95) BS01 CA ? GO:0002548 ... P80511 11134923
    10963 1e8a:B (1.95) BS02 CA ? GO:0002548 ... P80511 11134923
    10964 1e8c:A (2.0) BS01 UAG 6.3.2.13 GO:0000287 ... P22188 11124264
    10965 1e8c:A (2.0) BS02 API 6.3.2.13 GO:0000287 ... P22188 11124264
    10966 1e8c:B (2.0) BS01 UAG 6.3.2.13 GO:0000287 ... P22188 11124264
    10967 1e8c:B (2.0) BS02 API 6.3.2.13 GO:0000287 ... P22188 11124264
    10968 1e8d:A (2.2) BS01 CNH 4.1.2.47 GO:0003824 ... P52705 11316882
    10969 1e8d:A (2.2) BS02 CNH 4.1.2.47 GO:0003824 ... P52705 11316882
    10970 1e8d:B (2.2) BS01 CNH 4.1.2.47 GO:0003824 ... P52705 11316882
    10971 1e8e:A (-1.00) BS01 HEC ? GO:0003674 ... Q9RQB9 11327772
    10972 1e8g:A (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    10973 1e8g:A (2.1) BS02 FCR 1.1.3.38 GO:0003824 ... P56216 10984479
    10974 1e8g:B (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    10975 1e8g:B (2.1) BS02 FCR 1.1.3.38 GO:0003824 ... P56216 10984479
    10976 1e8h:A (2.6) BS01 ADP 1.1.3.38 GO:0003824 ... P56216 10984479
    10977 1e8h:B (2.6) BS01 ADP 1.1.3.38 GO:0003824 ... P56216 10984479
    10978 1e8k:A (1.9) BS01 ALA 5.2.1.8 GO:0000413 ... P52011 11180378
    10979 1e8k:A (1.9) BS02 PRO 5.2.1.8 GO:0000413 ... P52011 11180378
    10980 1e8m:A (1.5) BS01 P0H 3.4.21.26 GO:0004252 ... P23687 11031266
    10981 1e8n:A (1.5) BS01 peptide 3.4.21.26 GO:0004252 ... P23687 11031266
    10982 1e8o:A (3.2) BS01 rna ? GO:0003723 ... P49458 11089964
    10983 1e8o:B (3.2) BS01 rna ? GO:0005786 ... P37108 11089964
    10984 1e8o:C (3.2) BS01 rna ? GO:0003723 ... P49458 11089964
    10985 1e8o:D (3.2) BS01 rna ? GO:0005786 ... P37108 11089964
    10986 1e8t:A (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10987 1e8u:A (2.0) BS01 CA 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10988 1e8u:A (2.0) BS02 SLB 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10989 1e8u:B (2.0) BS01 CA 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10990 1e8u:B (2.0) BS02 SLB 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10991 1e8v:A (2.0) BS01 CA 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10992 1e8v:A (2.0) BS02 DAN 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10993 1e8v:B (2.0) BS01 CA 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10994 1e8v:B (2.0) BS02 DAN 3.2.1.18 GO:0004308 ... Q9Q2W5 11062565
    10995 1e8w:A (2.5) BS01 QUE 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... O02697 11090628
    10996 1e8x:A (2.2) BS01 ATP 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... O02697 11090628
    10997 1e8z:A (2.4) BS01 STU 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 11090628
    10998 1e90:A (2.7) BS01 MYC 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... O02697 11090628
    10999 1e91:A (-1.00) BS01 peptide ? GO:0003714 ... Q62141 11101889
    11000 1e92:A (2.2) BS01 NAP 1.5.1.33 GO:0004155 ... Q01782 11373620

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).