SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    115001 2x2f:A (2.0) BS03 MG 3.6.5.5 GO:0003924 ... Q05193 20428113
    115002 2x2f:A (2.0) BS04 NA 3.6.5.5 GO:0003924 ... Q05193 20428113
    115003 2x2f:D (2.0) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 20428113
    115004 2x2f:D (2.0) BS02 ALF 3.6.5.5 GO:0003924 ... Q05193 20428113
    115005 2x2f:D (2.0) BS03 MG 3.6.5.5 GO:0003924 ... Q05193 20428113
    115006 2x2f:D (2.0) BS04 NA 3.6.5.5 GO:0003924 ... Q05193 20428113
    115007 2x2i:A (2.6) BS01 GLC 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115008 2x2i:A (2.6) BS02 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115009 2x2i:A (2.6) BS03 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115010 2x2i:B (2.6) BS01 GLC 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115011 2x2i:B (2.6) BS02 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115012 2x2i:B (2.6) BS03 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115013 2x2i:C (2.6) BS01 GLC 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115014 2x2i:C (2.6) BS02 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115015 2x2i:C (2.6) BS03 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115016 2x2i:D (2.6) BS01 GLC 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115017 2x2i:D (2.6) BS02 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115018 2x2i:D (2.6) BS03 AC1 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115019 2x2j:A (2.35) BS01 NOJ 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115020 2x2j:B (2.35) BS01 NOJ 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115021 2x2j:C (2.35) BS01 NOJ 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115022 2x2j:D (2.35) BS01 NOJ 4.2.2.13 GO:0004553 ... Q9STC1 23902768
    115023 2x2k:A (2.6) BS01 X2K 2.7.10.1 GO:0004672 ... P07949 20117004 BindingDB: IC50=300nM
    115024 2x2l:A (2.0) BS01 X2L 2.7.10.1 GO:0004672 ... P07949 20117004 MOAD: ic50=5.3uM
    BindingDB: IC50=5300nM
    115025 2x2m:A (2.5) BS01 X2M 2.7.10.1 GO:0004672 ... P07949 20117004 MOAD: ic50=0.17uM
    BindingDB: IC50=170nM
    115026 2x2m:B (2.5) BS01 X2M 2.7.10.1 GO:0004672 ... P07949 20117004 MOAD: ic50=0.17uM
    BindingDB: IC50=170nM
    115027 2x2n:A (2.6) BS01 HEM 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115028 2x2n:A (2.6) BS02 X2N 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115029 2x2n:B (2.6) BS01 HEM 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115030 2x2n:B (2.6) BS02 X2N 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115031 2x2n:C (2.6) BS01 HEM 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115032 2x2n:C (2.6) BS02 X2N 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115033 2x2n:D (2.6) BS01 HEM 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115034 2x2n:D (2.6) BS02 X2N 1.14.13.70 GO:0004497 ... Q385E8 20386598
    115035 2x2o:A (1.13) BS01 FMN ? GO:0010181 ... Q81G57 20187055
    115036 2x2o:A (1.13) BS02 ZN ? GO:0010181 ... Q81G57 20187055
    115037 2x2p:A (1.15) BS01 FMN ? GO:0010181 ... Q81G57 20187055
    115038 2x2p:A (1.15) BS02 ZN ? GO:0010181 ... Q81G57 20187055
    115039 2x2r:A (2.2) BS01 ADP ? GO:0003777 ... P52732 21344920
    115040 2x2r:A (2.2) BS02 X2O ? GO:0003777 ... P52732 21344920 MOAD: Ki=76.2nM
    115041 2x2r:B (2.2) BS01 ADP ? GO:0003777 ... P52732 21344920
    115042 2x2r:B (2.2) BS02 X2O ? GO:0003777 ... P52732 21344920 MOAD: Ki=76.2nM
    115043 2x2r:C (2.2) BS01 ADP ? GO:0003777 ... P52732 21344920
    115044 2x2r:C (2.2) BS02 X2O ? GO:0003777 ... P52732 21344920 MOAD: Ki=76.2nM
    115045 2x2t:A (1.97) BS01 GAL ? N/A A7XUK7 20566411
    115046 2x2v:D (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115047 2x2v:F (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115048 2x2v:G (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115049 2x2v:H (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115050 2x2v:J (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115051 2x2v:M (2.5) BS01 DPV ? GO:0005886 ... P22483 20689804
    115052 2x2w:A (2.0) BS01 X2W 2.7.2.8 GO:0003991 ... P0A6C8 20403363
    115053 2x2w:A (2.0) BS02 SO4 2.7.2.8 GO:0003991 ... P0A6C8 20403363
    115054 2x2w:B (2.0) BS01 X2W 2.7.2.8 GO:0003991 ... P0A6C8 20403363
    115055 2x2w:B (2.0) BS02 SO4 2.7.2.8 GO:0003991 ... P0A6C8 20403363
    115056 2x2y:A (2.35) BS01 MG 3.2.1.78 GO:0004553 ... Q9XCV5 20426480
    115057 2x2y:B (2.35) BS01 MG 3.2.1.78 GO:0004553 ... Q9XCV5 20426480
    115058 2x32:A (1.55) BS01 OTP ? N/A Q21LI5 20227408
    115059 2x32:B (1.55) BS01 OTP ? N/A Q21LI5 20227408
    115060 2x34:A (1.9) BS01 UQ8 ? N/A Q21LI5 20227408
    115061 2x34:B (1.9) BS01 UQ8 ? N/A Q21LI5 20227408
    115062 2x38:A (2.2) BS01 IC8 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 20081827 MOAD: ic50=130nM
    115063 2x39:A (1.93) BS01 peptide 2.7.11.1 GO:0004672 ... P31751 20151677
    115064 2x39:A (1.93) BS02 X39 2.7.11.1 GO:0004672 ... P31751 20151677 MOAD: ic50=2.2nM
    BindingDB: IC50=2.2nM
    115065 2x3a:A (2.0) BS01 ZN 3.4.24.39 GO:0004222 ... Q8GMV9 27528449
    115066 2x3b:A (2.28) BS01 ZN 3.4.24.39 GO:0004222 ... Q8GMV9 27528449
    115067 2x3b:B (2.28) BS01 ZN 3.4.24.39 GO:0004222 ... Q8GMV9 27528449
    115068 2x3c:A (1.99) BS01 ZN 3.4.24.39 GO:0004222 ... Q8GMV9 27528449
    115069 2x3f:A (1.95) BS01 APC 6.3.2.1 GO:0004592 ... Q6GDK5 20419351
    115070 2x3f:B (1.95) BS01 APC 6.3.2.1 GO:0004592 ... Q6GDK5 20419351
    115071 2x3j:A (2.0) BS01 ATP ? GO:0016881 ... Q93AT8 21835184
    115072 2x3j:A (2.0) BS02 MG ? GO:0016881 ... Q93AT8 21835184
    115073 2x3j:B (2.0) BS01 ATP ? GO:0016881 ... Q93AT8 21835184
    115074 2x3j:B (2.0) BS02 MG ? GO:0016881 ... Q93AT8 21835184
    115075 2x3j:B (2.0) BS03 X3J ? GO:0016881 ... Q93AT8 21835184
    115076 2x3k:A (2.5) BS01 AMP ? GO:0016881 ... Q93AT8 N/A
    115077 2x3k:B (2.5) BS01 AMP ? GO:0016881 ... Q93AT8 N/A
    115078 2x3l:A (2.0) BS01 PLP N/A GO:0003824 ... N/A 20419351
    115079 2x3l:A (2.0) BS02 PLP N/A GO:0003824 ... N/A 20419351
    115080 2x3l:B (2.0) BS01 PLP N/A GO:0003824 ... N/A 20419351
    115081 2x3l:B (2.0) BS02 PLP N/A GO:0003824 ... N/A 20419351
    115082 2x3n:A (1.75) BS01 FAD ? GO:0003824 ... Q9HWJ1 20419351
    115083 2x3t:A (2.749) BS01 GYV ? GO:0008061 ... P10968 20527753
    115084 2x3t:A (2.749) BS02 GYV ? GO:0008061 ... P10968 20527753
    115085 2x3t:A (2.749) BS03 GYV ? GO:0008061 ... P10968 20527753
    115086 2x3t:B (2.749) BS01 GYV ? GO:0008061 ... P10968 20527753
    115087 2x3t:B (2.749) BS02 GYV ? GO:0008061 ... P10968 20527753
    115088 2x3t:B (2.749) BS03 GYV ? GO:0008061 ... P10968 20527753
    115089 2x3t:B (2.749) BS04 GYV ? GO:0008061 ... P10968 20527753
    115090 2x3t:C (2.749) BS01 GYV ? GO:0008061 ... P10968 20527753
    115091 2x3t:C (2.749) BS02 GYV ? GO:0008061 ... P10968 20527753
    115092 2x3t:C (2.749) BS03 GYV ? GO:0008061 ... P10968 20527753
    115093 2x3t:D (2.749) BS01 GYV ? GO:0008061 ... P10968 20527753
    115094 2x3t:D (2.749) BS02 GYV ? GO:0008061 ... P10968 20527753
    115095 2x3t:D (2.749) BS03 GYV ? GO:0008061 ... P10968 20527753
    115096 2x3t:D (2.749) BS04 GYV ? GO:0008061 ... P10968 20527753
    115097 2x3t:D (2.749) BS05 GYV ? GO:0008061 ... P10968 20527753
    115098 2x3u:A (1.93) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 20471952
    115099 2x3y:A (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115100 2x3y:B (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115101 2x3y:C (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115102 2x3y:D (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115103 2x3y:E (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115104 2x3y:F (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115105 2x3y:G (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115106 2x3y:H (2.4) BS01 ZN 5.3.1.28 GO:0005737 ... Q93UJ2 20447408
    115107 2x41:A (2.05) BS01 BGC 3.2.1.21 GO:0004553 ... Q0GC07 20138890
    115108 2x42:A (2.099) BS01 GLC 3.2.1.21 GO:0004553 ... Q0GC07 20138890
    115109 2x45:A (1.4) BS01 HSM ? GO:0005576 ... Q5GQ85 N/A
    115110 2x45:A (1.4) BS02 HSM ? GO:0005576 ... Q5GQ85 N/A
    115111 2x45:A (1.4) BS03 HSM ? GO:0005576 ... Q5GQ85 N/A
    115112 2x45:B (1.4) BS01 HSM ? GO:0005576 ... Q5GQ85 N/A
    115113 2x45:B (1.4) BS02 HSM ? GO:0005576 ... Q5GQ85 N/A
    115114 2x45:B (1.4) BS03 HSM ? GO:0005576 ... Q5GQ85 N/A
    115115 2x45:C (1.4) BS01 HSM ? GO:0005576 ... Q5GQ85 N/A
    115116 2x45:C (1.4) BS02 HSM ? GO:0005576 ... Q5GQ85 N/A
    115117 2x45:C (1.4) BS03 HSM ? GO:0005576 ... Q5GQ85 N/A
    115118 2x49:A (1.5) BS01 CA ? GO:0009306 ... P0A1I3 20306492
    115119 2x4d:A (1.92) BS01 POP 3.1.3.-
    3.6.1.1
    GO:0004427 ... Q9H008 N/A
    115120 2x4d:A (1.92) BS02 MG 3.1.3.-
    3.6.1.1
    GO:0004427 ... Q9H008 N/A
    115121 2x4d:B (1.92) BS01 POP 3.1.3.-
    3.6.1.1
    GO:0004427 ... Q9H008 N/A
    115122 2x4d:B (1.92) BS02 MG 3.1.3.-
    3.6.1.1
    GO:0004427 ... Q9H008 N/A
    115123 2x4f:A (2.67) BS01 16X 2.7.11.1 GO:0004672 ... Q86YV6 N/A
    115124 2x4f:B (2.67) BS01 16X 2.7.11.1 GO:0004672 ... Q86YV6 N/A
    115125 2x4h:A (2.3) BS01 ZN ? GO:0003677 ... Q97WF3 20419351
    115126 2x4h:A (2.3) BS02 ZN ? GO:0003677 ... Q97WF3 20419351
    115127 2x4h:A (2.3) BS03 ZN ? GO:0003677 ... Q97WF3 20419351
    115128 2x4h:A (2.3) BS04 ZN ? GO:0003677 ... Q97WF3 20419351
    115129 2x4h:B (2.3) BS01 ZN ? GO:0003677 ... Q97WF3 20419351
    115130 2x4h:B (2.3) BS02 ZN ? GO:0003677 ... Q97WF3 20419351
    115131 2x4h:B (2.3) BS03 ZN ? GO:0003677 ... Q97WF3 20419351
    115132 2x4h:B (2.3) BS04 ZN ? GO:0003677 ... Q97WF3 20419351
    115133 2x4h:C (2.3) BS01 ZN ? GO:0003677 ... Q97WF3 20419351
    115134 2x4h:C (2.3) BS02 ZN ? GO:0003677 ... Q97WF3 20419351
    115135 2x4h:C (2.3) BS03 ZN ? GO:0003677 ... Q97WF3 20419351
    115136 2x4h:C (2.3) BS04 ZN ? GO:0003677 ... Q97WF3 20419351
    115137 2x4h:D (2.3) BS01 ZN ? GO:0003677 ... Q97WF3 20419351
    115138 2x4h:D (2.3) BS02 ZN ? GO:0003677 ... Q97WF3 20419351
    115139 2x4h:D (2.3) BS03 ZN ? GO:0003677 ... Q97WF3 20419351
    115140 2x4h:D (2.3) BS04 ZN ? GO:0003677 ... Q97WF3 20419351
    115141 2x4m:A (2.55) BS01 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115142 2x4m:A (2.55) BS02 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115143 2x4m:A (2.55) BS03 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115144 2x4m:A (2.55) BS04 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115145 2x4m:B (2.55) BS01 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115146 2x4m:B (2.55) BS02 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115147 2x4m:B (2.55) BS03 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115148 2x4m:C (2.55) BS01 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115149 2x4m:C (2.55) BS02 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115150 2x4m:C (2.55) BS03 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115151 2x4m:D (2.55) BS01 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115152 2x4m:D (2.55) BS02 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115153 2x4m:D (2.55) BS03 C8E 3.4.23.48 GO:0004175 ... P17811 20637417
    115154 2x4n:A (2.34) BS01 peptide ? N/A P04439 19655750
    115155 2x4n:D (2.34) BS01 peptide ? N/A P04439 19655750
    115156 2x4o:A (2.3) BS01 peptide ? N/A P04439 19655750
    115157 2x4o:D (2.3) BS01 peptide ? N/A P04439 19655750
    115158 2x4p:A (2.3) BS01 peptide ? N/A P04439 19655751
    115159 2x4p:D (2.3) BS01 peptide ? N/A P04439 19655751
    115160 2x4q:A (1.9) BS01 peptide ? N/A P04439 19655751
    115161 2x4q:D (1.9) BS01 peptide ? N/A P04439 19655751
    115162 2x4r:A (2.3) BS01 peptide ? N/A P04439 19655750
    115163 2x4r:D (2.3) BS01 peptide ? N/A P04439 19655750
    115164 2x4s:A (2.55) BS01 peptide ? N/A P04439 19655750
    115165 2x4s:D (2.55) BS01 peptide ? N/A P04439 19655750
    115166 2x4t:A (2.3) BS01 peptide ? N/A P04439 19655751
    115167 2x4t:D (2.3) BS01 peptide ? N/A P04439 19655751
    115168 2x4u:A (2.1) BS01 peptide ? N/A P04439 19655750
    115169 2x4u:D (2.1) BS01 peptide ? N/A P04439 19655750
    115170 2x4w:A (1.5) BS01 peptide ? N/A P55201 20400950
    115171 2x4x:A (1.85) BS01 peptide ? N/A P55201 20400950
    115172 2x4x:C (1.85) BS01 peptide ? N/A P55201 20400950
    115173 2x4x:E (1.85) BS01 peptide ? N/A P55201 20400950
    115174 2x4x:G (1.85) BS01 peptide ? N/A P55201 20400950
    115175 2x4y:A (1.7) BS01 peptide ? N/A P55201 20400950
    115176 2x4y:C (1.7) BS01 peptide ? N/A P55201 20400950
    115177 2x4y:E (1.7) BS01 peptide ? N/A P55201 20400950
    115178 2x4y:G (1.7) BS01 peptide ? N/A P55201 20400950
    115179 2x4y:I (1.7) BS01 peptide ? N/A P55201 20400950
    115180 2x4y:K (1.7) BS01 peptide ? N/A P55201 20400950
    115181 2x4y:M (1.7) BS01 peptide ? N/A P55201 20400950
    115182 2x4y:O (1.7) BS01 peptide ? N/A P55201 20400950
    115183 2x4z:A (2.1) BS01 7KC 2.7.11.1 GO:0004672 ... O96013 20439741 MOAD: Kd=2.7nM
    BindingDB: Ki=15nM, IC50=19nM
    115184 2x50:A (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115185 2x50:A (3.3) BS02 NDP 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115186 2x50:A (3.3) BS03 AG 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115187 2x50:B (3.3) BS01 FAD 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115188 2x50:B (3.3) BS02 AG 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115189 2x50:B (3.3) BS03 AG 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115190 2x50:B (3.3) BS04 NDP 1.8.1.12 GO:0004362 ... A4HSF7 24900299
    115191 2x51:B (2.2) BS01 CA ? GO:0000226 ... P62152 21278381
    115192 2x51:B (2.2) BS02 CA ? GO:0000226 ... P62152 21278381
    115193 2x51:B (2.2) BS03 CA ? GO:0000226 ... P62152 21278381
    115194 2x52:A (1.7) BS01 GYT ? GO:0008061 ... P10969 20527753
    115195 2x52:A (1.7) BS02 GYT ? GO:0008061 ... P10969 20527753
    115196 2x52:A (1.7) BS03 GYT ? GO:0008061 ... P10969 20527753
    115197 2x52:A (1.7) BS04 GYT ? GO:0008061 ... P10969 20527753
    115198 2x52:B (1.7) BS01 GYT ? GO:0008061 ... P10969 20527753
    115199 2x52:B (1.7) BS02 GYT ? GO:0008061 ... P10969 20527753
    115200 2x52:B (1.7) BS03 GYT ? GO:0008061 ... P10969 20527753

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).