SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11401 1ef0:A (2.1) BS01 ZN 3.1.-.-
    7.1.2.2
    GO:0003677 ... P17255 10828056
    11402 1ef0:B (2.1) BS01 ZN 3.1.-.-
    7.1.2.2
    GO:0003677 ... P17255 10828056
    11403 1ef2:A (2.5) BS01 MN 3.5.1.5 GO:0005515 ... P18314 10555581
    11404 1ef2:A (2.5) BS02 MN 3.5.1.5 GO:0005515 ... P18314 10555581
    11405 1ef3:A (2.8) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 10882376
    11406 1ef3:A (2.8) BS02 FID 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 10882376 BindingDB: IC50=35nM, Kd=16nM
    11407 1ef3:B (2.8) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 10882376
    11408 1ef3:B (2.8) BS02 FID 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 10882376 BindingDB: IC50=35nM, Kd=16nM
    11409 1ef4:A (-1.00) BS01 ZN 2.7.7.6 GO:0000428 ... O26147 10841539
    11410 1ef9:A (2.7) BS01 2CP 4.1.1.- GO:0003824 ... P52045 10769118
    11411 1efa:A (2.6) BS01 dna ? GO:0000976 ... P03023 10700279
    11412 1efa:A (2.6) BS02 dna ? GO:0000976 ... P03023 10700279
    11413 1efa:A (2.6) BS03 NPF ? GO:0000976 ... P03023 10700279
    11414 1efa:B (2.6) BS01 dna ? GO:0000976 ... P03023 10700279
    11415 1efa:B (2.6) BS02 dna ? GO:0000976 ... P03023 10700279
    11416 1efa:B (2.6) BS03 NPF ? GO:0000976 ... P03023 10700279
    11417 1efa:C (2.6) BS01 NPF ? GO:0000976 ... P03023 10700279
    11418 1efc:A (2.05) BS01 GDP ? GO:0000287 ... P0CE47 9918724
    11419 1efc:B (2.05) BS01 GDP ? GO:0000287 ... P0CE47 9918724
    11420 1efd:N (1.9) BS01 GCR ? GO:0005515 ... P07822 10742172
    11421 1efg:A (2.7) BS01 GDP ? GO:0003746 ... Q5SHN5 8070396
    11422 1efh:A (2.4) BS01 A3P 2.8.2.14
    2.8.2.2
    GO:0004027 ... Q06520 10854859
    11423 1efh:B (2.4) BS01 A3P 2.8.2.14
    2.8.2.2
    GO:0004027 ... Q06520 10854859
    11424 1efi:D (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    11425 1efi:E (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    11426 1efi:F (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    11427 1efi:G (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    11428 1efi:H (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    11429 1efk:A (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11430 1efk:A (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11431 1efk:A (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11432 1efk:A (2.6) BS04 MAK 1.1.1.38 GO:0004470 ... P23368 10700286
    11433 1efk:A (2.6) BS05 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11434 1efk:B (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11435 1efk:B (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11436 1efk:B (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11437 1efk:B (2.6) BS04 MAK 1.1.1.38 GO:0004470 ... P23368 10700286
    11438 1efk:C (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11439 1efk:C (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11440 1efk:C (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11441 1efk:C (2.6) BS04 MAK 1.1.1.38 GO:0004470 ... P23368 10700286
    11442 1efk:D (2.6) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11443 1efk:D (2.6) BS02 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11444 1efk:D (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11445 1efk:D (2.6) BS04 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11446 1efk:D (2.6) BS05 MAK 1.1.1.38 GO:0004470 ... P23368 10700286
    11447 1efl:A (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11448 1efl:A (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11449 1efl:A (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11450 1efl:A (2.6) BS04 TTN 1.1.1.38 GO:0004470 ... P23368 10700286
    11451 1efl:B (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11452 1efl:B (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11453 1efl:B (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11454 1efl:B (2.6) BS04 TTN 1.1.1.38 GO:0004470 ... P23368 10700286
    11455 1efl:C (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11456 1efl:C (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11457 1efl:C (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11458 1efl:C (2.6) BS04 TTN 1.1.1.38 GO:0004470 ... P23368 10700286
    11459 1efl:D (2.6) BS01 MG 1.1.1.38 GO:0004470 ... P23368 10700286
    11460 1efl:D (2.6) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11461 1efl:D (2.6) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    11462 1efl:D (2.6) BS04 TTN 1.1.1.38 GO:0004470 ... P23368 10700286
    11463 1efm:A (2.7) BS01 GDP ? GO:0000287 ... P0CE48 3898365
    11464 1efp:A (2.6) BS01 FAD ? GO:0009055 ... P38974 10026281
    11465 1efp:B (2.6) BS01 FAD ? GO:0005737 ... P38975 10026281
    11466 1efp:B (2.6) BS02 AMP ? GO:0005737 ... P38975 10026281
    11467 1efp:C (2.6) BS01 FAD ? GO:0009055 ... P38974 10026281
    11468 1efp:D (2.6) BS01 FAD ? GO:0005737 ... P38975 10026281
    11469 1efp:D (2.6) BS02 AMP ? GO:0005737 ... P38975 10026281
    11470 1efr:A (3.1) BS01 peptide 3.6.1.34 GO:0005515 ... P19483 8790345
    11471 1efr:A (3.1) BS02 ANP 3.6.1.34 GO:0005515 ... P19483 8790345
    11472 1efr:B (3.1) BS01 peptide 3.6.1.34 GO:0005515 ... P19483 8790345
    11473 1efr:B (3.1) BS02 ANP 3.6.1.34 GO:0005515 ... P19483 8790345
    11474 1efr:C (3.1) BS01 ANP 3.6.1.34 GO:0005515 ... P19483 8790345
    11475 1efr:D (3.1) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 8790345
    11476 1efr:E (3.1) BS01 peptide 7.1.2.2 GO:0005515 ... P00829 8790345
    11477 1efr:F (3.1) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 8790345
    11478 1efr:G (3.1) BS01 peptide 3.6.1.34 GO:0005515 ... P05631 8790345
    11479 1eft:A (2.5) BS01 MG ? GO:0000287 ... Q01698 8069622
    11480 1eft:A (2.5) BS02 GNP ? GO:0000287 ... Q01698 8069622
    11481 1efv:A (2.1) BS01 FAD ? GO:0005515 ... P13804 8962055
    11482 1efv:B (2.1) BS01 AMP ? GO:0005515 ... P38117 8962055
    11483 1efw:A (3.0) BS01 rna 6.1.1.12 GO:0000166 ... P36419 10843857
    11484 1efw:B (3.0) BS01 rna 6.1.1.12 GO:0000166 ... P36419 10843857
    11485 1efx:A (3.0) BS01 peptide ? N/A P10321 10850706
    11486 1efx:D (3.0) BS01 peptide ? N/A P43627 10850706
    11487 1efy:A (2.2) BS01 BZC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P26446 11063605 MOAD: Ki=6nM
    11488 1efz:A (2.0) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 10413112
    11489 1efz:A (2.0) BS02 PRF 2.4.2.29 GO:0002099 ... P28720 10413112
    11490 1eg2:A (1.75) BS01 MTA 2.1.1.72 GO:0003676 ... P14751 11024175
    11491 1eg4:A (2.0) BS01 peptide ? N/A P11532 10932245
    11492 1eg5:A (2.0) BS01 PLP 2.8.1.7 GO:0031071 ... Q9X218 10715213
    11493 1eg5:B (2.0) BS01 PLP 2.8.1.7 GO:0031071 ... Q9X218 10715213
    11494 1eg9:A (1.6) BS01 FE 1.14.12.12 GO:0005506 ... P0A110 10669618
    11495 1eg9:A (1.6) BS02 FES 1.14.12.12 GO:0005506 ... P0A110 10669618
    11496 1eg9:A (1.6) BS03 IND 1.14.12.12 GO:0005506 ... P0A110 10669618
    11497 1egc:A (2.6) BS01 CO8 1.3.8.7 GO:0003995 ... P11310 8823176
    11498 1egc:A (2.6) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11499 1egc:A (2.6) BS03 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11500 1egc:B (2.6) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11501 1egc:B (2.6) BS02 CO8 1.3.8.7 GO:0003995 ... P11310 8823176
    11502 1egc:B (2.6) BS03 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11503 1egc:C (2.6) BS01 CO8 1.3.8.7 GO:0003995 ... P11310 8823176
    11504 1egc:C (2.6) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11505 1egc:C (2.6) BS03 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11506 1egc:D (2.6) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11507 1egc:D (2.6) BS02 CO8 1.3.8.7 GO:0003995 ... P11310 8823176
    11508 1egc:D (2.6) BS03 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11509 1egd:A (2.4) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11510 1egd:A (2.4) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11511 1egd:B (2.4) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11512 1egd:B (2.4) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11513 1egd:C (2.4) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11514 1egd:C (2.4) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11515 1egd:D (2.4) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11516 1egd:D (2.4) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11517 1ege:A (2.75) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11518 1ege:A (2.75) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11519 1ege:B (2.75) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11520 1ege:B (2.75) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11521 1ege:C (2.75) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11522 1ege:C (2.75) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11523 1ege:D (2.75) BS01 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11524 1ege:D (2.75) BS02 FAD 1.3.8.7 GO:0003995 ... P11310 8823176
    11525 1egg:A (2.3) BS01 CA ? N/A P22897 10779515
    11526 1egg:B (2.3) BS01 CA ? N/A P22897 10779515
    11527 1egh:A (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11528 1egh:B (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11529 1egh:C (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11530 1egh:D (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11531 1egh:E (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11532 1egh:F (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    11533 1egi:A (2.3) BS01 CA ? N/A P22897 10779515
    11534 1egi:B (2.3) BS01 CA ? N/A P22897 10779515
    11535 1egm:A (1.85) BS01 CNC 4.2.1.28 GO:0003824 ... Q59470 10903944
    11536 1egm:B (1.85) BS01 CNC 4.2.1.28 GO:0050215 ... Q59471 10903944
    11537 1egm:E (1.85) BS01 CNC 4.2.1.28 GO:0050215 ... Q59471 10903944
    11538 1egm:L (1.85) BS01 CNC 4.2.1.28 GO:0003824 ... Q59470 10903944
    11539 1egn:A (1.6) BS01 CO 3.2.1.91 GO:0004553 ... P62694 11336632
    11540 1egn:A (1.6) BS02 CO 3.2.1.91 GO:0004553 ... P62694 11336632
    11541 1egp:A (2.0) BS01 peptide ? GO:0004867 ... P01051 8425603
    11542 1egq:A (1.55) BS01 CA 3.4.21.64 GO:0004252 ... P06873 11438752
    11543 1egq:A (1.55) BS02 CA 3.4.21.64 GO:0004252 ... P06873 11438752
    11544 1egu:A (1.56) BS01 SO4 4.2.2.1 GO:0005576 ... Q54873 10716923
    11545 1egv:A (1.75) BS01 COY 4.2.1.28 GO:0003824 ... Q59470 10903944
    11546 1egv:B (1.75) BS01 COY 4.2.1.28 GO:0050215 ... Q59471 10903944
    11547 1egv:E (1.75) BS01 COY 4.2.1.28 GO:0050215 ... Q59471 10903944
    11548 1egv:L (1.75) BS01 COY 4.2.1.28 GO:0003824 ... Q59470 10903944
    11549 1egw:A (1.5) BS01 dna ? GO:0000977 ... Q02078 10715212
    11550 1egw:A (1.5) BS02 dna ? GO:0000977 ... Q02078 10715212
    11551 1egw:B (1.5) BS01 dna ? GO:0000977 ... Q02078 10715212
    11552 1egw:B (1.5) BS02 dna ? GO:0000977 ... Q02078 10715212
    11553 1egw:B (1.5) BS03 dna ? GO:0000977 ... Q02078 10715212
    11554 1egw:C (1.5) BS01 dna ? GO:0000977 ... Q02078 10715212
    11555 1egw:C (1.5) BS02 dna ? GO:0000977 ... Q02078 10715212
    11556 1egw:C (1.5) BS03 dna ? GO:0000977 ... Q02078 10715212
    11557 1egw:D (1.5) BS01 dna ? GO:0000977 ... Q02078 10715212
    11558 1egw:D (1.5) BS02 dna ? GO:0000977 ... Q02078 10715212
    11559 1egy:A (2.35) BS01 HEM 1.14.15.35 GO:0004497 ... Q00441 10716705
    11560 1egy:A (2.35) BS02 9AP 1.14.15.35 GO:0004497 ... Q00441 10716705
    11561 1egy:A (2.35) BS03 9AP 1.14.15.35 GO:0004497 ... Q00441 10716705
    11562 1egz:A (2.3) BS01 CA 3.2.1.4 GO:0000272 ... P07103 11501995
    11563 1egz:B (2.3) BS01 CA 3.2.1.4 GO:0000272 ... P07103 11501995
    11564 1egz:C (2.3) BS01 CA 3.2.1.4 GO:0000272 ... P07103 11501995
    11565 1eh2:A (-1.00) BS01 CA ? GO:0005509 ... P42566 9721102
    11566 1eh3:A (2.0) BS01 FE 3.4.21.- GO:0005576 ... P02788 10828980
    11567 1eh3:A (2.0) BS02 CO3 3.4.21.- GO:0005576 ... P02788 10828980
    11568 1eh4:A (2.8) BS01 IC1 2.7.11.1 GO:0004672 ... P40233 10749871
    11569 1eh4:B (2.8) BS01 IC1 2.7.11.1 GO:0004672 ... P40233 10749871
    11570 1eh6:A (2.0) BS01 ZN 2.1.1.63 GO:0003677 ... P16455 10747039
    11571 1eh7:A (2.0) BS01 ZN 2.1.1.63 GO:0003677 ... P16455 10747039
    11572 1eh8:A (2.5) BS01 ZN 2.1.1.63 GO:0003677 ... P16455 10747039
    11573 1ehb:A (1.9) BS01 HEM ? GO:0020037 ... P00171 10842340
    11574 1ehe:A (1.7) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 11051564
    11575 1ehf:A (1.7) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 11051564
    11576 1ehg:A (1.7) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 11051564
    11577 1ehi:A (2.38) BS01 MG 6.3.2.4 GO:0005524 ... Q03ZI1 10801495
    11578 1ehi:A (2.38) BS02 ADP 6.3.2.4 GO:0005524 ... Q03ZI1 10801495
    11579 1ehi:A (2.38) BS03 PHY 6.3.2.4 GO:0005524 ... Q03ZI1 10801495
    11580 1ehj:A (-1.00) BS01 HEC ? GO:0009055 ... P00137 10561607
    11581 1ehj:A (-1.00) BS02 HEC ? GO:0009055 ... P00137 10561607
    11582 1ehj:A (-1.00) BS03 HEC ? GO:0009055 ... P00137 10561607
    11583 1ehk:A (2.4) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 10775261
    11584 1ehk:A (2.4) BS02 HEM 7.1.1.9 GO:0004129 ... Q5SJ79 10775261
    11585 1ehk:A (2.4) BS03 HAS 7.1.1.9 GO:0004129 ... Q5SJ79 10775261
    11586 1ehk:B (2.4) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 10775261
    11587 1ehl:H (2.4) BS01 dna ? N/A P01863 10835279
    11588 1ehl:L (2.4) BS01 dna ? GO:0002250 ... P01837 10835279
    11589 1ei1:A (2.3) BS01 ANP 5.6.2.2 GO:0003677 ... P0AES6 10734094
    11590 1ei1:B (2.3) BS01 ANP 5.6.2.2 GO:0003677 ... P0AES6 10734094
    11591 1ei6:A (2.1) BS01 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11592 1ei6:A (2.1) BS02 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11593 1ei6:A (2.1) BS03 PPF 3.11.1.2 GO:0016787 ... Q51782 N/A
    11594 1ei6:B (2.1) BS01 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11595 1ei6:B (2.1) BS02 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11596 1ei6:C (2.1) BS01 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11597 1ei6:C (2.1) BS02 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11598 1ei6:C (2.1) BS03 PPF 3.11.1.2 GO:0016787 ... Q51782 N/A
    11599 1ei6:D (2.1) BS01 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A
    11600 1ei6:D (2.1) BS02 ZN 3.11.1.2 GO:0016787 ... Q51782 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).