SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11801 1elx:A (2.6) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11802 1elx:A (2.6) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11803 1elx:B (2.6) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11804 1elx:B (2.6) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11805 1elx:B (2.6) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11806 1elx:B (2.6) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11807 1ely:A (2.8) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11808 1ely:A (2.8) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11809 1ely:A (2.8) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11810 1ely:A (2.8) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11811 1ely:B (2.8) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11812 1ely:B (2.8) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11813 1ely:B (2.8) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11814 1ely:B (2.8) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11815 1elz:A (2.8) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11816 1elz:A (2.8) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11817 1elz:A (2.8) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11818 1elz:A (2.8) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11819 1elz:B (2.8) BS01 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11820 1elz:B (2.8) BS02 ZN 3.1.3.1 GO:0000287 ... P00634 9533886
    11821 1elz:B (2.8) BS03 MG 3.1.3.1 GO:0000287 ... P00634 9533886
    11822 1elz:B (2.8) BS04 PO4 3.1.3.1 GO:0000287 ... P00634 9533886
    11823 1em1:A (2.13) BS01 MN 1.15.1.1 GO:0004784 ... P04179 10852710
    11824 1em1:B (2.13) BS01 MN 1.15.1.1 GO:0004784 ... P04179 10852710
    11825 1em6:A (2.2) BS01 NBG 2.4.1.1 GO:0002060 ... P06737 10980448
    11826 1em6:A (2.2) BS02 CP4 2.4.1.1 GO:0002060 ... P06737 10980448 MOAD: ic50=6nM
    BindingDB: IC50=6.0nM
    11827 1em6:A (2.2) BS03 PLP 2.4.1.1 GO:0002060 ... P06737 10980448
    11828 1em6:B (2.2) BS01 CP4 2.4.1.1 GO:0002060 ... P06737 10980448 BindingDB: IC50=6.0nM
    11829 1em6:B (2.2) BS02 NBG 2.4.1.1 GO:0002060 ... P06737 10980448
    11830 1em6:B (2.2) BS03 PLP 2.4.1.1 GO:0002060 ... P06737 10980448
    11831 1emd:A (1.9) BS01 NAD 1.1.1.37 GO:0003824 ... P61889 8331658
    11832 1emh:A (1.8) BS01 dna 3.2.2.27 GO:0004844 ... P13051 10805771
    11833 1emj:A (2.0) BS01 dna 3.2.2.27 GO:0004844 ... P13051 10805771
    11834 1emj:A (2.0) BS02 dna 3.2.2.27 GO:0004844 ... P13051 10805771
    11835 1emj:A (2.0) BS03 URA 3.2.2.27 GO:0004844 ... P13051 10805771
    11836 1emn:A (-1.00) BS01 CA ? GO:0005509 ... P35555 8653794
    11837 1emn:A (-1.00) BS02 CA ? GO:0005509 ... P35555 8653794
    11838 1emo:A (-1.00) BS01 CA ? GO:0005509 ... P35555 8653794
    11839 1emo:A (-1.00) BS02 CA ? GO:0005509 ... P35555 8653794
    11840 1emu:A (1.9) BS01 peptide ? GO:0090090 ... O15169 10811618
    11841 1emy:A (1.78) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02186 7657658
    11842 1en4:A (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11843 1en4:B (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11844 1en4:C (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11845 1en4:D (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11846 1en5:A (2.3) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11847 1en5:B (2.3) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11848 1en5:C (2.3) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11849 1en5:D (2.3) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11850 1en6:A (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11851 1en6:B (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11852 1en6:C (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11853 1en6:D (2.0) BS01 MN 1.15.1.1 GO:0003677 ... P00448 11141052
    11854 1en7:A (2.4) BS01 ZN 3.1.-.- GO:0004518 ... P13340 10075917
    11855 1en7:A (2.4) BS02 CA 3.1.-.- GO:0004518 ... P13340 10075917
    11856 1en7:B (2.4) BS01 ZN 3.1.-.- GO:0004518 ... P13340 10075917
    11857 1en7:B (2.4) BS02 CA 3.1.-.- GO:0004518 ... P13340 10075917
    11858 1en7:B (2.4) BS03 CA 3.1.-.- GO:0004518 ... P13340 10075917
    11859 1ena:A (2.15) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8025105
    11860 1enc:A (1.95) BS01 CA 3.1.31.1 GO:0003676 ... P00644 8025105
    11861 1enc:A (1.95) BS02 THP 3.1.31.1 GO:0003676 ... P00644 8025105
    11862 1eno:A (1.9) BS01 NAD 1.3.1.9 GO:0004318 ... P80030 8535786
    11863 1enp:A (2.6) BS01 NAD 1.3.1.9 GO:0004318 ... P80030 8535786
    11864 1enq:A (2.5) BS01 ZN ? GO:0030246 ... P02866 8663112
    11865 1enq:B (2.5) BS01 ZN ? GO:0030246 ... P02866 8663112
    11866 1enq:C (2.5) BS01 ZN ? GO:0030246 ... P02866 8663112
    11867 1enq:D (2.5) BS01 ZN ? GO:0030246 ... P02866 8663112
    11868 1enr:A (1.83) BS01 CA ? GO:0030246 ... P02866 8663112
    11869 1enr:A (1.83) BS02 ZN ? GO:0030246 ... P02866 8663112
    11870 1ens:A (2.8) BS01 CO ? GO:0030246 ... P02866 8663112
    11871 1ens:B (2.8) BS01 CO ? GO:0030246 ... P02866 8663112
    11872 1ent:E (1.9) BS01 0EM 3.4.23.22 GO:0004190 ... P11838 2179568 MOAD: Ki=110nM
    11873 1enu:A (1.95) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 11178905
    11874 1enu:A (1.95) BS02 APZ 2.4.2.29 GO:0002099 ... P28720 11178905 MOAD: Ki=8.3uM
    11875 1eny:A (2.2) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 7886450
    11876 1enz:A (2.7) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 7886450
    11877 1eo2:B (2.25) BS01 FE 1.13.11.3 GO:0003824 ... P20372 10891075
    11878 1eo3:A (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11879 1eo3:A (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11880 1eo3:A (2.0) BS03 MG 3.1.21.4 GO:0003677 ... P04390 N/A
    11881 1eo3:A (2.0) BS04 MG 3.1.21.4 GO:0003677 ... P04390 N/A
    11882 1eo3:B (2.0) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11883 1eo3:B (2.0) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11884 1eo3:B (2.0) BS03 MG 3.1.21.4 GO:0003677 ... P04390 N/A
    11885 1eo3:B (2.0) BS04 MG 3.1.21.4 GO:0003677 ... P04390 N/A
    11886 1eo4:A (1.9) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11887 1eo4:A (1.9) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11888 1eo4:A (1.9) BS03 MN 3.1.21.4 GO:0003677 ... P04390 N/A
    11889 1eo4:A (1.9) BS04 MN 3.1.21.4 GO:0003677 ... P04390 N/A
    11890 1eo4:A (1.9) BS05 MN 3.1.21.4 GO:0003677 ... P04390 N/A
    11891 1eo4:B (1.9) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11892 1eo4:B (1.9) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11893 1eo5:A (2.0) BS01 BGC 2.4.1.19 GO:0003824 ... P43379 10869182
    11894 1eo5:A (2.0) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11895 1eo5:A (2.0) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11896 1eo5:A (2.0) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11897 1eo5:A (2.0) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11898 1eo5:A (2.0) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11899 1eo5:A (2.0) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11900 1eo5:A (2.0) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11901 1eo5:A (2.0) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11902 1eo5:A (2.0) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11903 1eo5:A (2.0) BS11 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11904 1eo5:A (2.0) BS12 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11905 1eo5:A (2.0) BS13 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11906 1eo5:A (2.0) BS14 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11907 1eo5:A (2.0) BS15 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11908 1eo7:A (2.48) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11909 1eo7:A (2.48) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11910 1eo7:A (2.48) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11911 1eo7:A (2.48) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11912 1eo7:A (2.48) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11913 1eo7:A (2.48) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11914 1eo7:A (2.48) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11915 1eo7:A (2.48) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11916 1eo7:A (2.48) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11917 1eo7:A (2.48) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 10869182
    11918 1eo7:A (2.48) BS11 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11919 1eo7:A (2.48) BS12 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11920 1eo7:A (2.48) BS13 CA 2.4.1.19 GO:0003824 ... P43379 10869182
    11921 1eo9:B (2.0) BS01 FE 1.13.11.3 GO:0003824 ... P20372 10891075
    11922 1eo9:B (2.0) BS02 SO4 1.13.11.3 GO:0003824 ... P20372 10891075
    11923 1eoa:B (2.15) BS01 FE 1.13.11.3 GO:0003824 ... P20372 10891075
    11924 1eoa:B (2.15) BS02 CYN 1.13.11.3 GO:0003824 ... P20372 10891075
    11925 1eoa:B (2.15) BS03 CYN 1.13.11.3 GO:0003824 ... P20372 10891075
    11926 1eoa:B (2.15) BS04 CYN 1.13.11.3 GO:0003824 ... P20372 10891075
    11927 1eob:B (2.2) BS01 FE 1.13.11.3 GO:0003824 ... P20372 10891075
    11928 1eoc:B (2.25) BS01 FE 1.13.11.3 GO:0003824 ... P20372 10891075
    11929 1eoc:B (2.25) BS02 4NC 1.13.11.3 GO:0003824 ... P20372 10891075 MOAD: Ki=0.9uM
    11930 1eoi:A (2.4) BS01 MOO 3.1.3.2 GO:0003993 ... Q9S1A6 10835340
    11931 1eoi:B (2.4) BS01 MOO 3.1.3.2 GO:0003993 ... Q9S1A6 10835340
    11932 1eoi:C (2.4) BS01 MOO 3.1.3.2 GO:0003993 ... Q9S1A6 10835340
    11933 1eoj:A (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10694407
    11934 1eol:A (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10694407
    11935 1eom:A (2.1) BS01 MAN 3.2.1.96 GO:0005576 ... P36913 10891067
    11936 1eom:A (2.1) BS02 MAN 3.2.1.96 GO:0005576 ... P36913 10891067
    11937 1eon:A (1.6) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11938 1eon:A (1.6) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11939 1eon:B (1.6) BS01 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11940 1eon:B (1.6) BS02 dna 3.1.21.4 GO:0003677 ... P04390 N/A
    11941 1eoo:A (2.16) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11942 1eoo:A (2.16) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11943 1eoo:B (2.16) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11944 1eoo:B (2.16) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11945 1eop:A (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11946 1eop:A (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11947 1eop:B (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11948 1eop:B (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P04390 10801972
    11949 1eos:A (2.0) BS01 U2G 4.6.1.18 GO:0003676 ... P61823 10892814
    11950 1eou:A (2.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 11802772
    11951 1eou:A (2.1) BS02 SMS 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 11802772 MOAD: ic50=36nM
    BindingDB: IC50=36nM, Kd=10nM, Ki=12nM
    11952 1eow:A (2.0) BS01 SO4 4.6.1.18 GO:0003676 ... P61823 10892814
    11953 1eow:A (2.0) BS02 U2G 4.6.1.18 GO:0003676 ... P61823 10892814
    11954 1ep1:A (2.2) BS01 FMN 1.3.1.14 GO:0004152 ... P54322 11188687
    11955 1ep1:B (2.2) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    11956 1ep1:B (2.2) BS02 FES 1.3.3.1 GO:0005515 ... P56968 11188687
    11957 1ep2:A (2.4) BS01 FMN 1.3.1.14 GO:0004152 ... P54322 11188687
    11958 1ep2:B (2.4) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    11959 1ep2:B (2.4) BS02 FES 1.3.3.1 GO:0005515 ... P56968 11188687
    11960 1ep3:A (2.1) BS01 FMN 1.3.1.14 GO:0004152 ... P54322 11188687
    11961 1ep3:B (2.1) BS01 FAD 1.3.3.1 GO:0005515 ... P56968 11188687
    11962 1ep3:B (2.1) BS02 FES 1.3.3.1 GO:0005515 ... P56968 11188687
    11963 1ep4:A (2.5) BS01 S11 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P04585 10799511 BindingDB: IC50=47nM
    11964 1ep9:A (2.4) BS01 CP 2.1.3.3 GO:0000050 ... P00480 11237854
    11965 1epb:A (2.2) BS01 9CR ? GO:0005576 ... P06911 8069623
    11966 1epb:B (2.2) BS01 9CR ? GO:0005576 ... P06911 8069623
    11967 1epl:E (2.0) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 7703859
    11968 1epm:E (1.6) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 7703859
    11969 1epn:E (1.6) BS01 2ZS 3.4.23.22 GO:0004190 ... P11838 7703859
    11970 1epo:E (2.0) BS01 2Z3 3.4.23.22 GO:0004190 ... P11838 1304340 MOAD: Ki=11nM
    11971 1epp:E (1.9) BS01 1Z1 3.4.23.22 GO:0004190 ... P11838 8254610 MOAD: Ki=69nM
    11972 1epq:E (1.9) BS01 0QF 3.4.23.22 GO:0004190 ... P11838 8254610 MOAD: Ki=6.5nM
    11973 1epr:E (2.3) BS01 0QS 3.4.23.22 GO:0004190 ... P11838 7703859
    11974 1ept:B (1.8) BS01 CA 3.4.21.4 GO:0004252 ... P00761 7947985
    11975 1epv:A (2.2) BS01 DCS 5.1.1.1 GO:0003824 ... P10724 12741835
    11976 1epv:A (2.2) BS02 DCS 5.1.1.1 GO:0003824 ... P10724 12741835
    11977 1epv:B (2.2) BS01 DCS 5.1.1.1 GO:0003824 ... P10724 12741835
    11978 1epv:B (2.2) BS02 DCS 5.1.1.1 GO:0003824 ... P10724 12741835
    11979 1epw:A (1.9) BS01 ZN 3.4.24.69 GO:0004222 ... P10844 10932256
    11980 1epy:A (1.85) BS01 CO 3.2.1.17 GO:0003796 ... P00720 10835104
    11981 1epz:A (1.75) BS01 TYD 5.1.3.13 GO:0000271 ... O27818 10827167
    11982 1eq2:A (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11983 1eq2:A (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11984 1eq2:B (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11985 1eq2:B (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11986 1eq2:C (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11987 1eq2:C (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11988 1eq2:D (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11989 1eq2:D (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11990 1eq2:E (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11991 1eq2:E (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11992 1eq2:F (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11993 1eq2:F (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11994 1eq2:G (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11995 1eq2:G (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11996 1eq2:H (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11997 1eq2:H (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    11998 1eq2:I (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473
    11999 1eq2:I (2.0) BS02 ADQ 5.1.3.20 GO:0005515 ... P67910 10896473
    12000 1eq2:J (2.0) BS01 NAP 5.1.3.20 GO:0005515 ... P67910 10896473

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).