SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    123601 3a09:A (1.4) BS04 CA ? N/A A0ACD6B942 N/A
    123602 3a0b:A (3.7) BS01 OEC 1.10.3.9 GO:0005506 ... P51765 19433803
    123603 3a0b:A (3.7) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 19433803
    123604 3a0b:A (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123605 3a0b:A (3.7) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123606 3a0b:A (3.7) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123607 3a0b:A (3.7) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123608 3a0b:A (3.7) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123609 3a0b:A (3.7) BS08 BR 1.10.3.9 GO:0005506 ... P51765 19433803
    123610 3a0b:A (3.7) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123611 3a0b:A (3.7) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123612 3a0b:B (3.7) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    123613 3a0b:B (3.7) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    123614 3a0b:B (3.7) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    123615 3a0b:B (3.7) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    123616 3a0b:B (3.7) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    123617 3a0b:B (3.7) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    123618 3a0b:B (3.7) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    123619 3a0b:B (3.7) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    123620 3a0b:B (3.7) BS09 CLA ? GO:0009521 ... D0VWR1 19433803
    123621 3a0b:B (3.7) BS10 CLA ? GO:0009521 ... D0VWR1 19433803
    123622 3a0b:B (3.7) BS11 CLA ? GO:0009521 ... D0VWR1 19433803
    123623 3a0b:B (3.7) BS12 CLA ? GO:0009521 ... D0VWR1 19433803
    123624 3a0b:B (3.7) BS13 CLA ? GO:0009521 ... D0VWR1 19433803
    123625 3a0b:B (3.7) BS14 CLA ? GO:0009521 ... D0VWR1 19433803
    123626 3a0b:B (3.7) BS15 CLA ? GO:0009521 ... D0VWR1 19433803
    123627 3a0b:B (3.7) BS16 CLA ? GO:0009521 ... D0VWR1 19433803
    123628 3a0b:C (3.7) BS01 OEC ? GO:0005737 ... D0VWR7 19433803
    123629 3a0b:C (3.7) BS02 CLA ? GO:0005737 ... D0VWR7 19433803
    123630 3a0b:C (3.7) BS03 CLA ? GO:0005737 ... D0VWR7 19433803
    123631 3a0b:C (3.7) BS04 CLA ? GO:0005737 ... D0VWR7 19433803
    123632 3a0b:C (3.7) BS05 CLA ? GO:0005737 ... D0VWR7 19433803
    123633 3a0b:C (3.7) BS06 CLA ? GO:0005737 ... D0VWR7 19433803
    123634 3a0b:C (3.7) BS07 CLA ? GO:0005737 ... D0VWR7 19433803
    123635 3a0b:C (3.7) BS08 CLA ? GO:0005737 ... D0VWR7 19433803
    123636 3a0b:C (3.7) BS09 CLA ? GO:0005737 ... D0VWR7 19433803
    123637 3a0b:C (3.7) BS10 CLA ? GO:0005737 ... D0VWR7 19433803
    123638 3a0b:C (3.7) BS11 CLA ? GO:0005737 ... D0VWR7 19433803
    123639 3a0b:C (3.7) BS12 CLA ? GO:0005737 ... D0VWR7 19433803
    123640 3a0b:C (3.7) BS13 CLA ? GO:0005737 ... D0VWR7 19433803
    123641 3a0b:C (3.7) BS14 CLA ? GO:0005737 ... D0VWR7 19433803
    123642 3a0b:D (3.7) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123643 3a0b:D (3.7) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123644 3a0b:D (3.7) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123645 3a0b:D (3.7) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123646 3a0b:D (3.7) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123647 3a0b:D (3.7) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123648 3a0b:D (3.7) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123649 3a0b:D (3.7) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123650 3a0b:E (3.7) BS01 peptide ? GO:0005506 ... P12238 19433803
    123651 3a0b:E (3.7) BS02 HEM ? GO:0005506 ... P12238 19433803
    123652 3a0b:F (3.7) BS01 HEM ? GO:0005506 ... P12239 19433803
    123653 3a0b:H (3.7) BS01 CLA ? GO:0009523 ... P19052 19433803
    123654 3a0b:H (3.7) BS02 CLA ? GO:0009523 ... P19052 19433803
    123655 3a0b:H (3.7) BS03 CLA ? GO:0009523 ... P19052 19433803
    123656 3a0b:I (3.7) BS01 CLA ? GO:0005737 ... P12240 19433803
    123657 3a0b:I (3.7) BS02 CLA ? GO:0005737 ... P12240 19433803
    123658 3a0b:J (3.7) BS01 peptide ? GO:0009523 ... Q7DGD4 19433803
    123659 3a0b:K (3.7) BS01 peptide ? GO:0005737 ... P19054 19433803
    123660 3a0b:K (3.7) BS02 CLA ? GO:0005737 ... P19054 19433803
    123661 3a0b:K (3.7) BS03 CLA ? GO:0005737 ... P19054 19433803
    123662 3a0b:K (3.7) BS04 CLA ? GO:0005737 ... P19054 19433803
    123663 3a0b:L (3.7) BS01 CLA ? GO:0005737 ... P12241 19433803
    123664 3a0b:M (3.7) BS01 CLA ? GO:0005737 ... P12312 19433803
    123665 3a0b:V (3.7) BS01 HEM ? GO:0005506 ... P0A387 19433803
    123666 3a0b:X (3.7) BS01 CLA ? GO:0009523 ... D0VWR4 19433803
    123667 3a0b:Z (3.7) BS01 peptide ? GO:0009523 ... D0VWR5 19433803
    123668 3a0b:Z (3.7) BS02 CLA ? GO:0009523 ... D0VWR5 19433803
    123669 3a0b:a (3.7) BS01 OEC 1.10.3.9 GO:0005506 ... P51765 19433803
    123670 3a0b:a (3.7) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 19433803
    123671 3a0b:a (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123672 3a0b:a (3.7) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123673 3a0b:a (3.7) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123674 3a0b:a (3.7) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123675 3a0b:a (3.7) BS07 BR 1.10.3.9 GO:0005506 ... P51765 19433803
    123676 3a0b:a (3.7) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123677 3a0b:a (3.7) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123678 3a0b:a (3.7) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123679 3a0b:a (3.7) BS11 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123680 3a0b:b (3.7) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    123681 3a0b:b (3.7) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    123682 3a0b:b (3.7) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    123683 3a0b:b (3.7) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    123684 3a0b:b (3.7) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    123685 3a0b:b (3.7) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    123686 3a0b:b (3.7) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    123687 3a0b:b (3.7) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    123688 3a0b:b (3.7) BS09 CLA ? GO:0009521 ... D0VWR1 19433803
    123689 3a0b:b (3.7) BS10 CLA ? GO:0009521 ... D0VWR1 19433803
    123690 3a0b:b (3.7) BS11 CLA ? GO:0009521 ... D0VWR1 19433803
    123691 3a0b:b (3.7) BS12 CLA ? GO:0009521 ... D0VWR1 19433803
    123692 3a0b:b (3.7) BS13 CLA ? GO:0009521 ... D0VWR1 19433803
    123693 3a0b:b (3.7) BS14 CLA ? GO:0009521 ... D0VWR1 19433803
    123694 3a0b:b (3.7) BS15 CLA ? GO:0009521 ... D0VWR1 19433803
    123695 3a0b:c (3.7) BS01 OEC ? GO:0005737 ... D0VWR7 19433803
    123696 3a0b:c (3.7) BS02 CLA ? GO:0005737 ... D0VWR7 19433803
    123697 3a0b:c (3.7) BS03 CLA ? GO:0005737 ... D0VWR7 19433803
    123698 3a0b:c (3.7) BS04 CLA ? GO:0005737 ... D0VWR7 19433803
    123699 3a0b:c (3.7) BS05 CLA ? GO:0005737 ... D0VWR7 19433803
    123700 3a0b:c (3.7) BS06 CLA ? GO:0005737 ... D0VWR7 19433803
    123701 3a0b:c (3.7) BS07 CLA ? GO:0005737 ... D0VWR7 19433803
    123702 3a0b:c (3.7) BS08 CLA ? GO:0005737 ... D0VWR7 19433803
    123703 3a0b:c (3.7) BS09 CLA ? GO:0005737 ... D0VWR7 19433803
    123704 3a0b:c (3.7) BS10 CLA ? GO:0005737 ... D0VWR7 19433803
    123705 3a0b:c (3.7) BS11 CLA ? GO:0005737 ... D0VWR7 19433803
    123706 3a0b:c (3.7) BS12 CLA ? GO:0005737 ... D0VWR7 19433803
    123707 3a0b:c (3.7) BS13 CLA ? GO:0005737 ... D0VWR7 19433803
    123708 3a0b:c (3.7) BS14 CLA ? GO:0005737 ... D0VWR7 19433803
    123709 3a0b:d (3.7) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123710 3a0b:d (3.7) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123711 3a0b:d (3.7) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123712 3a0b:d (3.7) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123713 3a0b:d (3.7) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123714 3a0b:d (3.7) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123715 3a0b:d (3.7) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123716 3a0b:d (3.7) BS08 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123717 3a0b:e (3.7) BS01 peptide ? GO:0005506 ... P12238 19433803
    123718 3a0b:e (3.7) BS02 HEM ? GO:0005506 ... P12238 19433803
    123719 3a0b:f (3.7) BS01 HEM ? GO:0005506 ... P12239 19433803
    123720 3a0b:h (3.7) BS01 CLA ? GO:0009523 ... P19052 19433803
    123721 3a0b:h (3.7) BS02 CLA ? GO:0009523 ... P19052 19433803
    123722 3a0b:h (3.7) BS03 CLA ? GO:0009523 ... P19052 19433803
    123723 3a0b:i (3.7) BS01 CLA ? GO:0005737 ... P12240 19433803
    123724 3a0b:i (3.7) BS02 CLA ? GO:0005737 ... P12240 19433803
    123725 3a0b:k (3.7) BS01 peptide ? GO:0005737 ... P19054 19433803
    123726 3a0b:k (3.7) BS02 CLA ? GO:0005737 ... P19054 19433803
    123727 3a0b:l (3.7) BS01 CLA ? GO:0005737 ... P12241 19433803
    123728 3a0b:m (3.7) BS01 CLA ? GO:0005737 ... P12312 19433803
    123729 3a0b:v (3.7) BS01 HEM ? GO:0005506 ... P0A387 19433803
    123730 3a0b:x (3.7) BS01 CLA ? GO:0009523 ... D0VWR4 19433803
    123731 3a0b:z (3.7) BS01 peptide ? GO:0009523 ... D0VWR5 19433803
    123732 3a0b:z (3.7) BS02 CLA ? GO:0009523 ... D0VWR5 19433803
    123733 3a0d:A (2.2) BS01 MMA ? N/A Q8L568 20546901
    123734 3a0d:A (2.2) BS02 SO4 ? N/A Q8L568 20546901
    123735 3a0d:A (2.2) BS03 SO4 ? N/A Q8L568 20546901
    123736 3a0d:A (2.2) BS04 SO4 ? N/A Q8L568 20546901
    123737 3a0e:A (2.0) BS01 MAN ? N/A Q8L568 20546901
    123738 3a0e:A (2.0) BS02 SO4 ? N/A Q8L568 20546901
    123739 3a0e:A (2.0) BS03 SO4 ? N/A Q8L568 20546901
    123740 3a0g:A (2.5) BS01 HEM ? GO:0004601 ... P01947 N/A
    123741 3a0g:A (2.5) BS02 OXY ? GO:0004601 ... P01947 N/A
    123742 3a0g:B (2.5) BS01 HEM ? GO:0004601 ... P02095 N/A
    123743 3a0g:B (2.5) BS02 OXY ? GO:0004601 ... P02095 N/A
    123744 3a0h:A (4.0) BS01 OEC 1.10.3.9 GO:0005506 ... P51765 19433803
    123745 3a0h:A (4.0) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123746 3a0h:A (4.0) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123747 3a0h:A (4.0) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123748 3a0h:A (4.0) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123749 3a0h:A (4.0) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123750 3a0h:A (4.0) BS07 FE2 1.10.3.9 GO:0005506 ... P51765 19433803
    123751 3a0h:A (4.0) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123752 3a0h:A (4.0) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123753 3a0h:A (4.0) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123754 3a0h:B (4.0) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    123755 3a0h:B (4.0) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    123756 3a0h:B (4.0) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    123757 3a0h:B (4.0) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    123758 3a0h:B (4.0) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    123759 3a0h:B (4.0) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    123760 3a0h:B (4.0) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    123761 3a0h:B (4.0) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    123762 3a0h:B (4.0) BS09 CLA ? GO:0009521 ... D0VWR1 19433803
    123763 3a0h:B (4.0) BS10 CLA ? GO:0009521 ... D0VWR1 19433803
    123764 3a0h:B (4.0) BS11 CLA ? GO:0009521 ... D0VWR1 19433803
    123765 3a0h:B (4.0) BS12 CLA ? GO:0009521 ... D0VWR1 19433803
    123766 3a0h:B (4.0) BS13 CLA ? GO:0009521 ... D0VWR1 19433803
    123767 3a0h:B (4.0) BS14 CLA ? GO:0009521 ... D0VWR1 19433803
    123768 3a0h:B (4.0) BS15 CLA ? GO:0009521 ... D0VWR1 19433803
    123769 3a0h:C (4.0) BS01 OEC ? GO:0005737 ... D0VWR7 19433803
    123770 3a0h:C (4.0) BS02 CLA ? GO:0005737 ... D0VWR7 19433803
    123771 3a0h:C (4.0) BS03 CLA ? GO:0005737 ... D0VWR7 19433803
    123772 3a0h:C (4.0) BS04 CLA ? GO:0005737 ... D0VWR7 19433803
    123773 3a0h:C (4.0) BS05 CLA ? GO:0005737 ... D0VWR7 19433803
    123774 3a0h:C (4.0) BS06 CLA ? GO:0005737 ... D0VWR7 19433803
    123775 3a0h:C (4.0) BS07 CLA ? GO:0005737 ... D0VWR7 19433803
    123776 3a0h:C (4.0) BS08 CLA ? GO:0005737 ... D0VWR7 19433803
    123777 3a0h:C (4.0) BS09 CLA ? GO:0005737 ... D0VWR7 19433803
    123778 3a0h:C (4.0) BS10 CLA ? GO:0005737 ... D0VWR7 19433803
    123779 3a0h:C (4.0) BS11 CLA ? GO:0005737 ... D0VWR7 19433803
    123780 3a0h:C (4.0) BS12 CLA ? GO:0005737 ... D0VWR7 19433803
    123781 3a0h:C (4.0) BS13 CLA ? GO:0005737 ... D0VWR7 19433803
    123782 3a0h:C (4.0) BS14 CLA ? GO:0005737 ... D0VWR7 19433803
    123783 3a0h:D (4.0) BS01 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123784 3a0h:D (4.0) BS02 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123785 3a0h:D (4.0) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123786 3a0h:D (4.0) BS04 FE2 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123787 3a0h:D (4.0) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123788 3a0h:D (4.0) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123789 3a0h:D (4.0) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123790 3a0h:D (4.0) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123791 3a0h:D (4.0) BS09 IOD 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123792 3a0h:E (4.0) BS01 peptide ? GO:0005506 ... P12238 19433803
    123793 3a0h:E (4.0) BS02 HEM ? GO:0005506 ... P12238 19433803
    123794 3a0h:F (4.0) BS01 HEM ? GO:0005506 ... P12239 19433803
    123795 3a0h:H (4.0) BS01 CLA ? GO:0009523 ... P19052 19433803
    123796 3a0h:H (4.0) BS02 CLA ? GO:0009523 ... P19052 19433803
    123797 3a0h:H (4.0) BS03 CLA ? GO:0009523 ... P19052 19433803
    123798 3a0h:I (4.0) BS01 CLA ? GO:0005737 ... P12240 19433803
    123799 3a0h:K (4.0) BS01 peptide ? GO:0005737 ... P19054 19433803
    123800 3a0h:K (4.0) BS02 CLA ? GO:0005737 ... P19054 19433803

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).