SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    125001 3ab4:O (2.47) BS02 LYS 2.7.2.4 GO:0004072 ... P26512 20573952
    125002 3ab4:O (2.47) BS03 THR 2.7.2.4 GO:0004072 ... P26512 20573952
    125003 3ab4:P (2.47) BS01 THR 2.7.2.4 N/A P26512 20573952
    125004 3ab4:P (2.47) BS02 LYS 2.7.2.4 N/A P26512 20573952
    125005 3ab4:P (2.47) BS03 THR 2.7.2.4 N/A P26512 20573952
    125006 3ab5:A (1.18) BS01 FES ? GO:0009055 ... Q85FT5 N/A
    125007 3ab5:B (1.18) BS01 FES ? GO:0009055 ... Q85FT5 N/A
    125008 3ab8:A (1.7) BS01 ATP ? N/A Q5SLE3 N/A
    125009 3ab8:A (1.7) BS02 ATP ? N/A Q5SLE3 N/A
    125010 3ab8:B (1.7) BS01 ATP ? N/A Q5SLE3 N/A
    125011 3ab8:B (1.7) BS02 ATP ? N/A Q5SLE3 N/A
    125012 3ab9:A (1.65) BS01 CA ? GO:0005737 ... P0A6T9 20375021
    125013 3aba:A (1.8) BS01 HEM 1.14.13.- GO:0004497 ... Q93H81 20375018
    125014 3aba:A (1.8) BS02 FLI 1.14.13.- GO:0004497 ... Q93H81 20375018
    125015 3abb:A (2.3) BS01 HEM 1.14.13.- GO:0004497 ... Q93H80 20375018
    125016 3abd:A (1.9) BS01 peptide ? GO:0000122 ... Q9UI95 20164194
    125017 3abd:B (1.9) BS01 peptide ? GO:0000122 ... Q9UI95 20164194
    125018 3abe:C (2.6) BS01 peptide ? GO:0000122 ... Q9UI95 20164194
    125019 3abg:A (2.3) BS01 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125020 3abg:A (2.3) BS02 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125021 3abg:A (2.3) BS03 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125022 3abg:A (2.3) BS04 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125023 3abg:A (2.3) BS05 OXY 1.3.3.5 GO:0005507 ... Q12737 20606269
    125024 3abg:B (2.3) BS01 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125025 3abg:B (2.3) BS02 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125026 3abg:B (2.3) BS03 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125027 3abg:B (2.3) BS04 CU 1.3.3.5 GO:0005507 ... Q12737 20606269
    125028 3abg:B (2.3) BS05 OXY 1.3.3.5 GO:0005507 ... Q12737 20606269
    125029 3abi:A (2.44) BS01 SO4 1.4.1.18 N/A O59312 20056607
    125030 3abi:A (2.44) BS02 NAD 1.4.1.18 N/A O59312 20056607
    125031 3abi:B (2.44) BS01 NAD 1.4.1.18 N/A O59312 20056607
    125032 3abk:A (2.0) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 20208153
    125033 3abk:A (2.0) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 20208153
    125034 3abk:A (2.0) BS03 NO 7.1.1.9 GO:0004129 ... P00396 20208153
    125035 3abk:A (2.0) BS04 CU 7.1.1.9 GO:0004129 ... P00396 20208153
    125036 3abk:A (2.0) BS05 MG 7.1.1.9 GO:0004129 ... P00396 20208153
    125037 3abk:B (2.0) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 20208153
    125038 3abk:B (2.0) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 20208153
    125039 3abk:C (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 20208153
    125040 3abk:F (2.0) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 20208153
    125041 3abk:G (2.0) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 20208153
    125042 3abk:M (2.0) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 20208153
    125043 3abk:N (2.0) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 20208153
    125044 3abk:N (2.0) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 20208153
    125045 3abk:N (2.0) BS03 NO 7.1.1.9 GO:0004129 ... P00396 20208153
    125046 3abk:N (2.0) BS04 CU 7.1.1.9 GO:0004129 ... P00396 20208153
    125047 3abk:N (2.0) BS05 MG 7.1.1.9 GO:0004129 ... P00396 20208153
    125048 3abk:O (2.0) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 20208153
    125049 3abk:P (2.0) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 20208153
    125050 3abk:Q (2.0) BS01 DMU 1.9.3.1 GO:0006123 ... P00423 20208153
    125051 3abk:S (2.0) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 20208153
    125052 3abk:T (2.0) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 20208153
    125053 3abk:Z (2.0) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 20208153
    125054 3abl:A (2.1) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    125055 3abl:A (2.1) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    125056 3abl:A (2.1) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    125057 3abl:A (2.1) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125058 3abl:A (2.1) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125059 3abl:B (2.1) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 19164527
    125060 3abl:B (2.1) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    125061 3abl:C (2.1) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    125062 3abl:F (2.1) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    125063 3abl:M (2.1) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    125064 3abl:N (2.1) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    125065 3abl:N (2.1) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    125066 3abl:N (2.1) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    125067 3abl:N (2.1) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125068 3abl:N (2.1) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125069 3abl:O (2.1) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    125070 3abl:P (2.1) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    125071 3abl:S (2.1) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    125072 3abl:Z (2.1) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    125073 3abm:A (1.95) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    125074 3abm:A (1.95) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    125075 3abm:A (1.95) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    125076 3abm:A (1.95) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125077 3abm:A (1.95) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125078 3abm:B (1.95) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 19164527
    125079 3abm:B (1.95) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    125080 3abm:C (1.95) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    125081 3abm:F (1.95) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    125082 3abm:M (1.95) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    125083 3abm:N (1.95) BS01 CU 7.1.1.9 GO:0004129 ... P00396 19164527
    125084 3abm:N (1.95) BS02 PER 7.1.1.9 GO:0004129 ... P00396 19164527
    125085 3abm:N (1.95) BS03 MG 7.1.1.9 GO:0004129 ... P00396 19164527
    125086 3abm:N (1.95) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125087 3abm:N (1.95) BS05 HEA 7.1.1.9 GO:0004129 ... P00396 19164527
    125088 3abm:O (1.95) BS01 CUA 7.1.1.9 GO:0004129 ... P68530 19164527
    125089 3abm:P (1.95) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 19164527
    125090 3abm:Q (1.95) BS01 DMU 1.9.3.1 GO:0006123 ... P00423 19164527
    125091 3abm:S (1.95) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 19164527
    125092 3abm:Z (1.95) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 19164527
    125093 3abo:A (2.1) BS01 ETA 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125094 3abo:A (2.1) BS02 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125095 3abo:B (2.1) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125096 3abo:C (2.1) BS01 ETA 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125097 3abo:C (2.1) BS02 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125098 3abo:D (2.1) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125099 3abq:A (2.05) BS01 2A1 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125100 3abq:A (2.05) BS02 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125101 3abq:B (2.05) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125102 3abq:C (2.05) BS01 2A1 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125103 3abq:C (2.05) BS02 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125104 3abq:D (2.05) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125105 3abr:A (2.1) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125106 3abr:B (2.1) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125107 3abr:C (2.1) BS01 B12 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125108 3abr:D (2.1) BS01 B12 4.3.1.7 GO:0006520 ... P19636 20519496
    125109 3abs:A (2.25) BS01 COY 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125110 3abs:A (2.25) BS02 ETA 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125111 3abs:B (2.25) BS01 COY 4.3.1.7 GO:0006520 ... P19636 20519496
    125112 3abs:C (2.25) BS01 COY 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125113 3abs:C (2.25) BS02 ETA 4.3.1.7 GO:0005829 ... P0AEJ6 20519496
    125114 3abs:D (2.25) BS01 COY 4.3.1.7 GO:0006520 ... P19636 20519496
    125115 3abt:A (3.2) BS01 2PF 1.14.99.66 GO:0005634 ... O60341 20568732
    125116 3abu:A (3.1) BS01 12F 1.14.99.66 GO:0005634 ... O60341 20568732
    125117 3abv:A (3.24) BS01 FAD 1.3.5.1 GO:0005515 ... Q0QF01 26198225
    125118 3abv:B (3.24) BS01 FES 1.3.5.1 GO:0005515 ... Q007T0 26198225
    125119 3abv:B (3.24) BS02 SF4 1.3.5.1 GO:0005515 ... Q007T0 26198225
    125120 3abv:B (3.24) BS03 F6A 1.3.5.1 GO:0005515 ... Q007T0 26198225
    125121 3abv:B (3.24) BS04 F3S 1.3.5.1 GO:0005515 ... Q007T0 26198225
    125122 3abv:C (3.24) BS01 F6A ? GO:0006099 ... D0VWV4 26198225
    125123 3abv:C (3.24) BS02 HEM ? GO:0006099 ... D0VWV4 26198225
    125124 3abv:D (3.24) BS01 HEM ? GO:0005740 ... A5GZW8 26198225
    125125 3abv:D (3.24) BS02 EPH ? GO:0005740 ... A5GZW8 26198225
    125126 3abw:A (1.9) BS01 RET N/A GO:0005216 ... N/A N/A
    125127 3abw:A (1.9) BS02 22B N/A GO:0005216 ... N/A N/A
    125128 3abw:A (1.9) BS03 AZI N/A GO:0005216 ... N/A N/A
    125129 3abw:A (1.9) BS04 22B N/A GO:0005216 ... N/A N/A
    125130 3abw:B (1.9) BS01 RET N/A GO:0005216 ... N/A N/A
    125131 3abw:B (1.9) BS02 22B N/A GO:0005216 ... N/A N/A
    125132 3abw:B (1.9) BS03 AZI N/A GO:0005216 ... N/A N/A
    125133 3abw:D (1.9) BS01 22B N/A GO:0005216 ... N/A N/A
    125134 3abw:D (1.9) BS02 RET N/A GO:0005216 ... N/A N/A
    125135 3abw:D (1.9) BS03 AZI N/A GO:0005216 ... N/A N/A
    125136 3abx:A (1.4) BS01 RCB 3.2.1.- GO:0004553 ... B7X9Z2 20148970
    125137 3abx:A (1.4) BS02 RCB 3.2.1.- GO:0004553 ... B7X9Z2 20148970
    125138 3ac0:A (2.54) BS01 BGC 3.2.1.21 GO:0004553 ... D1GCC6 20662765
    125139 3ac0:B (2.54) BS01 BGC 3.2.1.21 GO:0004553 ... D1GCC6 20662765
    125140 3ac0:C (2.54) BS01 BGC 3.2.1.21 GO:0004553 ... D1GCC6 20662765
    125141 3ac0:D (2.54) BS01 BGC 3.2.1.21 GO:0004553 ... D1GCC6 20662765
    125142 3ac1:A (1.99) BS01 KZI 2.7.10.2 GO:0004672 ... P06239 N/A
    125143 3ac2:A (2.1) BS01 KSE 2.7.10.2 GO:0004672 ... P06239 N/A
    125144 3ac3:A (2.55) BS01 KSH 2.7.10.2 GO:0004672 ... P06239 N/A
    125145 3ac4:A (2.7) BS01 KZL 2.7.10.2 GO:0004672 ... P06239 N/A
    125146 3ac5:A (2.5) BS01 KZM 2.7.10.2 GO:0004672 ... P06239 N/A
    125147 3ac8:A (2.3) BS01 KSK 2.7.10.2 GO:0004672 ... P06239 N/A
    125148 3ac9:A (2.1) BS01 8GD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125149 3ac9:A (2.1) BS02 8GD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125150 3ac9:B (2.1) BS01 8GD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125151 3ac9:B (2.1) BS02 8GD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125152 3ac9:B (2.1) BS03 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125153 3ac9:B (2.1) BS04 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125154 3aca:A (2.05) BS01 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125155 3aca:A (2.05) BS02 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125156 3aca:A (2.05) BS03 8DD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125157 3aca:A (2.05) BS04 8DD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125158 3aca:B (2.05) BS01 8DD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125159 3aca:B (2.05) BS02 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125160 3aca:B (2.05) BS03 MN 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125161 3aca:B (2.05) BS04 8DD 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0016787 ... Q9UKK9 21768126
    125162 3acc:A (2.16) BS01 5GP 2.4.2.8 GO:0000287 ... Q5SLS3 20693661
    125163 3acd:A (1.89) BS01 IMP 2.4.2.8 GO:0000287 ... Q5SLS3 20693661
    125164 3acf:A (1.6) BS01 CA 3.2.1.4 GO:0008810 ... Q59290 20159017
    125165 3acg:A (1.5) BS01 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125166 3acg:A (1.5) BS02 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125167 3acg:A (1.5) BS03 CA 3.2.1.4 GO:0008810 ... Q59290 20159017
    125168 3ach:A (1.4) BS01 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125169 3ach:A (1.4) BS02 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125170 3ach:A (1.4) BS03 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125171 3ach:A (1.4) BS04 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125172 3ach:A (1.4) BS05 CA 3.2.1.4 GO:0008810 ... Q59290 20159017
    125173 3aci:A (1.6) BS01 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125174 3aci:A (1.6) BS02 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125175 3aci:A (1.6) BS03 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125176 3aci:A (1.6) BS04 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125177 3aci:A (1.6) BS05 BGC 3.2.1.4 GO:0008810 ... Q59290 20159017
    125178 3aci:A (1.6) BS06 CA 3.2.1.4 GO:0008810 ... Q59290 20159017
    125179 3acj:A (2.2) BS01 KSS 2.7.10.2 GO:0004672 ... P06239 N/A
    125180 3ack:A (2.6) BS01 KSR 2.7.10.2 GO:0004672 ... P06239 N/A
    125181 3acl:A (2.35) BS01 FE2 1.13.11.24 GO:0003712 ... O00625 20711196
    125182 3acl:A (2.35) BS02 3F1 1.13.11.24 GO:0003712 ... O00625 20711196 MOAD: Kd=0.6uM
    125183 3aco:A (2.7) BS01 CA ? N/A Q9UNF0 20188097
    125184 3acs:A (2.51) BS01 BGC 2.4.1.20 GO:0005975 ... O66264 N/A
    125185 3acs:A (2.51) BS02 BGC 2.4.1.20 GO:0005975 ... O66264 N/A
    125186 3acs:B (2.51) BS01 BGC 2.4.1.20 GO:0005975 ... O66264 N/A
    125187 3act:A (1.85) BS01 BGC 2.4.1.20 GO:0005975 ... O66264 N/A
    125188 3act:A (1.85) BS02 PO4 2.4.1.20 GO:0005975 ... O66264 N/A
    125189 3act:B (1.85) BS01 BGC 2.4.1.20 GO:0005975 ... O66264 N/A
    125190 3act:B (1.85) BS02 PO4 2.4.1.20 GO:0005975 ... O66264 N/A
    125191 3acw:A (1.63) BS01 651 2.5.1.96 GO:0004311 ... A9JQL9 21098670
    125192 3acx:A (1.31) BS01 673 2.5.1.96 GO:0004311 ... A9JQL9 21098670
    125193 3acy:A (1.84) BS01 702 2.5.1.96 GO:0004311 ... A9JQL9 21098670
    125194 3acy:A (1.84) BS02 MG 2.5.1.96 GO:0004311 ... A9JQL9 21098670
    125195 3ad4:A (2.2) BS01 KBM 2.7.10.2 GO:0004672 ... P06239 N/A
    125196 3ad5:A (2.0) BS01 5PB 2.7.10.2 GO:0004672 ... P06239 N/A
    125197 3ad6:A (2.15) BS01 KSC 2.7.10.2 GO:0004672 ... P06239 N/A
    125198 3ad7:A (2.2) BS01 NAD 1.5.3.24 GO:0005737 ... Q50LF0 20675294
    125199 3ad7:A (2.2) BS02 FMN 1.5.3.24 GO:0005737 ... Q50LF0 20675294
    125200 3ad7:B (2.2) BS01 FAD 1.5.3.24 GO:0005737 ... Q50LF2 20675294

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).