SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    135601 3dta:M (3.2) BS03 FE ? GO:0009772 ... P0C0Y9 N/A
    135602 3dta:M (3.2) BS04 BCL ? GO:0009772 ... P0C0Y9 N/A
    135603 3dta:M (3.2) BS05 BCL ? GO:0009772 ... P0C0Y9 N/A
    135604 3dta:M (3.2) BS06 BPH ? GO:0009772 ... P0C0Y9 N/A
    135605 3dta:M (3.2) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    135606 3dta:M (3.2) BS08 SPN ? GO:0009772 ... P0C0Y9 N/A
    135607 3dtb:A (1.3) BS01 PGA 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135608 3dtb:A (1.3) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135609 3dtb:A (1.3) BS03 BCT 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135610 3dtb:A (1.3) BS04 GDP 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135611 3dtb:B (1.3) BS01 PGA 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135612 3dtb:B (1.3) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135613 3dtb:B (1.3) BS03 GDP 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18772387
    135614 3dtc:A (2.6) BS01 VIN 2.7.11.25 GO:0004672 ... P80192 18714982
    135615 3dtf:A (2.2) BS01 SO4 2.6.1.42 GO:0003824 ... A0R066 20445230
    135616 3dtf:B (2.2) BS01 SO4 2.6.1.42 GO:0003824 ... A0R066 20445230
    135617 3dtg:A (1.9) BS01 PLP 2.6.1.42 GO:0003824 ... A0R066 N/A
    135618 3dtg:A (1.9) BS02 OBZ 2.6.1.42 GO:0003824 ... A0R066 N/A
    135619 3dtg:B (1.9) BS01 OBZ 2.6.1.42 GO:0003824 ... A0R066 N/A
    135620 3dtg:B (1.9) BS02 PLP 2.6.1.42 GO:0003824 ... A0R066 N/A
    135621 3dti:A (3.5) BS01 ZN 3.4.24.- N/A C1CZ84 19150362
    135622 3dtk:A (3.24) BS01 ZN 3.4.24.- N/A C1CZ84 19150362
    135623 3dtk:A (3.24) BS02 ZN 3.4.24.- N/A C1CZ84 19150362
    135624 3dtn:A (2.09) BS01 CA ? N/A Q8PTS9 N/A
    135625 3dtn:B (2.09) BS01 CA ? N/A Q8PTS9 N/A
    135626 3dtr:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    135627 3dtr:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    135628 3dtr:L (3.1) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    135629 3dtr:L (3.1) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    135630 3dtr:L (3.1) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    135631 3dtr:L (3.1) BS06 BPH ? GO:0009772 ... P0C0Y8 N/A
    135632 3dtr:L (3.1) BS07 FE ? GO:0009772 ... P0C0Y8 N/A
    135633 3dtr:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    135634 3dtr:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    135635 3dtr:M (3.1) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    135636 3dtr:M (3.1) BS04 BCL ? GO:0009772 ... P0C0Y9 N/A
    135637 3dtr:M (3.1) BS05 BPH ? GO:0009772 ... P0C0Y9 N/A
    135638 3dtr:M (3.1) BS06 FE ? GO:0009772 ... P0C0Y9 N/A
    135639 3dtr:M (3.1) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    135640 3dtr:M (3.1) BS08 SPN ? GO:0009772 ... P0C0Y9 N/A
    135641 3dts:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    135642 3dts:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    135643 3dts:L (3.1) BS03 U10 ? GO:0009772 ... P0C0Y8 N/A
    135644 3dts:L (3.1) BS04 BPH ? GO:0009772 ... P0C0Y8 N/A
    135645 3dts:L (3.1) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    135646 3dts:L (3.1) BS06 BPH ? GO:0009772 ... P0C0Y8 N/A
    135647 3dts:L (3.1) BS07 FE ? GO:0009772 ... P0C0Y8 N/A
    135648 3dts:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    135649 3dts:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    135650 3dts:M (3.1) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    135651 3dts:M (3.1) BS04 BPH ? GO:0009772 ... P0C0Y9 N/A
    135652 3dts:M (3.1) BS05 BCL ? GO:0009772 ... P0C0Y9 N/A
    135653 3dts:M (3.1) BS06 FE ? GO:0009772 ... P0C0Y9 N/A
    135654 3dts:M (3.1) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    135655 3dts:M (3.1) BS08 SPN ? GO:0009772 ... P0C0Y9 N/A
    135656 3dtt:A (1.7) BS01 NAP ? N/A A0ACD6B8C7 N/A
    135657 3dtt:B (1.7) BS01 NAP ? N/A A0ACD6B8C7 N/A
    135658 3dtu:A (2.15) BS01 DMU 7.1.1.9 GO:0004129 ... P33517 18759498
    135659 3dtu:A (2.15) BS02 DMU 7.1.1.9 GO:0004129 ... P33517 18759498
    135660 3dtu:A (2.15) BS03 DMU 7.1.1.9 GO:0004129 ... P33517 18759498
    135661 3dtu:A (2.15) BS04 CU 7.1.1.9 GO:0004129 ... P33517 18759498
    135662 3dtu:A (2.15) BS05 MG 7.1.1.9 GO:0004129 ... P33517 18759498
    135663 3dtu:A (2.15) BS06 CA 7.1.1.9 GO:0004129 ... P33517 18759498
    135664 3dtu:A (2.15) BS07 HEA 7.1.1.9 GO:0004129 ... P33517 18759498
    135665 3dtu:A (2.15) BS08 HEA 7.1.1.9 GO:0004129 ... P33517 18759498
    135666 3dtu:B (2.15) BS01 DMU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135667 3dtu:B (2.15) BS02 DMU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135668 3dtu:B (2.15) BS03 CU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135669 3dtu:B (2.15) BS04 CU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135670 3dtu:C (2.15) BS01 DMU 7.1.1.9 GO:0004129 ... P33517 18759498
    135671 3dtu:C (2.15) BS02 DMU 7.1.1.9 GO:0004129 ... P33517 18759498
    135672 3dtu:C (2.15) BS03 CU 7.1.1.9 GO:0004129 ... P33517 18759498
    135673 3dtu:C (2.15) BS04 MG 7.1.1.9 GO:0004129 ... P33517 18759498
    135674 3dtu:C (2.15) BS05 CA 7.1.1.9 GO:0004129 ... P33517 18759498
    135675 3dtu:C (2.15) BS06 HEA 7.1.1.9 GO:0004129 ... P33517 18759498
    135676 3dtu:C (2.15) BS07 HEA 7.1.1.9 GO:0004129 ... P33517 18759498
    135677 3dtu:C (2.15) BS08 DXC 7.1.1.9 GO:0004129 ... P33517 18759498
    135678 3dtu:D (2.15) BS01 DMU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135679 3dtu:D (2.15) BS02 DXC 7.1.1.9 GO:0004129 ... Q03736 18759498
    135680 3dtu:D (2.15) BS03 DMU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135681 3dtu:D (2.15) BS04 CU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135682 3dtu:D (2.15) BS05 CU 7.1.1.9 GO:0004129 ... Q03736 18759498
    135683 3dtw:A (2.9) BS01 A96 2.7.10.1 GO:0004672 ... P35968 18723346 BindingDB: IC50=353nM
    135684 3dtw:B (2.9) BS01 A96 2.7.10.1 GO:0004672 ... P35968 18723346 BindingDB: IC50=353nM
    135685 3dtx:A (2.1) BS01 peptide ? N/A P01889 N/A
    135686 3dty:A (2.04) BS01 MG ? GO:0000166 ... Q880Y1 N/A
    135687 3dty:E (2.04) BS01 MG ? GO:0000166 ... Q880Y1 N/A
    135688 3du2:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    135689 3du2:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    135690 3du2:L (3.1) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    135691 3du2:L (3.1) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    135692 3du2:L (3.1) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    135693 3du2:L (3.1) BS06 BPH ? GO:0009772 ... P0C0Y8 N/A
    135694 3du2:L (3.1) BS07 FE ? GO:0009772 ... P0C0Y8 N/A
    135695 3du2:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    135696 3du2:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    135697 3du2:M (3.1) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    135698 3du2:M (3.1) BS04 BCL ? GO:0009772 ... P0C0Y9 N/A
    135699 3du2:M (3.1) BS05 BPH ? GO:0009772 ... P0C0Y9 N/A
    135700 3du2:M (3.1) BS06 FE ? GO:0009772 ... P0C0Y9 N/A
    135701 3du2:M (3.1) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    135702 3du2:M (3.1) BS08 SPN ? GO:0009772 ... P0C0Y9 N/A
    135703 3du3:L (2.8) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    135704 3du3:L (2.8) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    135705 3du3:L (2.8) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    135706 3du3:L (2.8) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    135707 3du3:L (2.8) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    135708 3du3:L (2.8) BS06 BPH ? GO:0009772 ... P0C0Y8 N/A
    135709 3du3:L (2.8) BS07 FE ? GO:0009772 ... P0C0Y8 N/A
    135710 3du3:M (2.8) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    135711 3du3:M (2.8) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    135712 3du3:M (2.8) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    135713 3du3:M (2.8) BS04 BCL ? GO:0009772 ... P0C0Y9 N/A
    135714 3du3:M (2.8) BS05 BPH ? GO:0009772 ... P0C0Y9 N/A
    135715 3du3:M (2.8) BS06 FE ? GO:0009772 ... P0C0Y9 N/A
    135716 3du3:M (2.8) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    135717 3du3:M (2.8) BS08 SPN ? GO:0009772 ... P0C0Y9 N/A
    135718 3du4:A (2.2) BS01 PLP 2.6.1.105 GO:0003824 ... P53555 20565114
    135719 3du4:A (2.2) BS02 KAP 2.6.1.105 GO:0003824 ... P53555 20565114
    135720 3du4:A (2.2) BS03 PLP 2.6.1.105 GO:0003824 ... P53555 20565114
    135721 3du4:A (2.2) BS04 KAP 2.6.1.105 GO:0003824 ... P53555 20565114
    135722 3du4:B (2.2) BS01 PLP 2.6.1.105 GO:0003824 ... P53555 20565114
    135723 3du4:B (2.2) BS02 KAP 2.6.1.105 GO:0003824 ... P53555 20565114
    135724 3du4:B (2.2) BS03 PLP 2.6.1.105 GO:0003824 ... P53555 20565114
    135725 3du4:B (2.2) BS04 KAP 2.6.1.105 GO:0003824 ... P53555 20565114
    135726 3du7:A (4.1) BS01 MG 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135727 3du7:A (4.1) BS02 CN2 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135728 3du7:A (4.1) BS03 GTP 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135729 3du7:B (4.1) BS01 CN2 ? GO:0000226 ... Q6B856 18787557
    135730 3du7:B (4.1) BS02 HOS ? GO:0000226 ... Q6B856 18787557
    135731 3du7:B (4.1) BS03 GDP ? GO:0000226 ... Q6B856 18787557
    135732 3du7:C (4.1) BS01 HOS 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135733 3du7:C (4.1) BS02 GTP 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135734 3du7:C (4.1) BS03 CN2 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    135735 3du7:D (4.1) BS01 GDP ? GO:0000226 ... Q6B856 18787557
    135736 3du7:D (4.1) BS02 CN2 ? GO:0000226 ... Q6B856 18787557
    135737 3du7:D (4.1) BS03 HOS ? GO:0000226 ... Q6B856 18787557
    135738 3du8:A (2.2) BS01 553 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 19115845 MOAD: ic50=0.146uM
    135739 3du8:B (2.2) BS01 553 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 19115845 MOAD: ic50=0.146uM
    135740 3duf:A (2.5) BS01 MG 1.2.4.1 GO:0004739 ... P21873 19081062
    135741 3duf:A (2.5) BS02 R1T 1.2.4.1 GO:0004739 ... P21873 19081062
    135742 3duf:B (2.5) BS01 R1T 1.2.4.1 GO:0004739 ... P21874 19081062
    135743 3duf:C (2.5) BS01 MG 1.2.4.1 GO:0004739 ... P21873 19081062
    135744 3duf:C (2.5) BS02 R1T 1.2.4.1 GO:0004739 ... P21873 19081062
    135745 3duf:D (2.5) BS01 R1T 1.2.4.1 GO:0004739 ... P21874 19081062
    135746 3duf:E (2.5) BS01 MG 1.2.4.1 GO:0004739 ... P21873 19081062
    135747 3duf:E (2.5) BS02 R1T 1.2.4.1 GO:0004739 ... P21873 19081062
    135748 3duf:F (2.5) BS01 R1T 1.2.4.1 GO:0004739 ... P21874 19081062
    135749 3duf:G (2.5) BS01 MG 1.2.4.1 GO:0004739 ... P21873 19081062
    135750 3duf:G (2.5) BS02 R1T 1.2.4.1 GO:0004739 ... P21873 19081062
    135751 3duf:H (2.5) BS01 R1T 1.2.4.1 GO:0004739 ... P21874 19081062
    135752 3dug:A (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135753 3dug:A (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135754 3dug:A (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135755 3dug:A (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135756 3dug:A (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135757 3dug:B (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135758 3dug:B (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135759 3dug:B (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135760 3dug:B (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135761 3dug:B (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135762 3dug:C (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135763 3dug:C (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135764 3dug:C (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135765 3dug:C (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135766 3dug:C (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135767 3dug:D (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135768 3dug:D (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135769 3dug:D (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135770 3dug:D (2.62) BS04 ARG N/A GO:0016787 ... N/A 19281183
    135771 3dug:E (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135772 3dug:E (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135773 3dug:E (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135774 3dug:E (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135775 3dug:E (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135776 3dug:F (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135777 3dug:F (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135778 3dug:F (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135779 3dug:F (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135780 3dug:F (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135781 3dug:G (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135782 3dug:G (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135783 3dug:G (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135784 3dug:G (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135785 3dug:G (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135786 3dug:H (2.62) BS01 ZN N/A GO:0016787 ... N/A 19281183
    135787 3dug:H (2.62) BS02 ZN N/A GO:0016787 ... N/A 19281183
    135788 3dug:H (2.62) BS03 ZN N/A GO:0016787 ... N/A 19281183
    135789 3dug:H (2.62) BS04 ZN N/A GO:0016787 ... N/A 19281183
    135790 3dug:H (2.62) BS05 ARG N/A GO:0016787 ... N/A 19281183
    135791 3duq:L (2.7) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    135792 3duq:L (2.7) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    135793 3duq:L (2.7) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    135794 3duq:L (2.7) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    135795 3duq:L (2.7) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    135796 3duq:L (2.7) BS06 BPH ? GO:0009772 ... P0C0Y8 N/A
    135797 3duq:L (2.7) BS07 FE ? GO:0009772 ... P0C0Y8 N/A
    135798 3duq:M (2.7) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    135799 3duq:M (2.7) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    135800 3duq:M (2.7) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).