SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    136601 3e1q:G (2.6) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136602 3e1q:H (2.6) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136603 3e1q:H (2.6) BS02 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136604 3e1q:H (2.6) BS03 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136605 3e1q:I (2.6) BS01 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136606 3e1q:I (2.6) BS02 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136607 3e1q:I (2.6) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136608 3e1q:J (2.6) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136609 3e1q:J (2.6) BS02 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136610 3e1q:J (2.6) BS03 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136611 3e1q:K (2.6) BS01 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136612 3e1q:K (2.6) BS02 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136613 3e1q:K (2.6) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136614 3e1q:L (2.6) BS01 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136615 3e1q:L (2.6) BS02 FE2 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136616 3e1q:L (2.6) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19705876
    136617 3e1r:A (2.0) BS01 peptide ? GO:0000281 ... Q53EZ4 18948538
    136618 3e1r:B (2.0) BS01 peptide ? GO:0000281 ... Q53EZ4 18948538
    136619 3e1t:A (2.05) BS01 FAD N/A GO:0004497 ... N/A 19000696
    136620 3e1u:A (2.3) BS01 ZN 3.5.4.38 GO:0008270 ... Q9HC16 18849968
    136621 3e1v:A (2.8) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136622 3e1v:B (2.8) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136623 3e1w:A (2.6) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136624 3e1w:B (2.6) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136625 3e1y:A (3.8) BS01 ATP ? GO:0002184 ... P62495 19417105
    136626 3e1y:A (3.8) BS02 ATP ? GO:0002184 ... P62495 19417105
    136627 3e1y:B (3.8) BS01 ATP ? GO:0002184 ... P62495 19417105
    136628 3e1y:B (3.8) BS02 ATP ? GO:0002184 ... P62495 19417105
    136629 3e1z:A (1.86) BS01 ZN ? GO:0004869 ... Q966X9 19143838
    136630 3e22:A (3.8) BS01 GTP 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136631 3e22:A (3.8) BS02 MG 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136632 3e22:A (3.8) BS03 LOC 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136633 3e22:B (3.8) BS01 GDP ? GO:0000226 ... Q6B856 18787557
    136634 3e22:B (3.8) BS02 LOC ? GO:0000226 ... Q6B856 18787557 BindingDB: IC50=800nM, Ki=780nM
    136635 3e22:B (3.8) BS03 TZT ? GO:0000226 ... Q6B856 18787557
    136636 3e22:C (3.8) BS01 TZT 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136637 3e22:C (3.8) BS02 GTP 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136638 3e22:C (3.8) BS03 MG 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136639 3e22:C (3.8) BS04 LOC 3.6.5.- GO:0000226 ... Q3ZCJ7 18787557
    136640 3e22:D (3.8) BS01 GDP ? GO:0000226 ... Q6B856 18787557
    136641 3e22:D (3.8) BS02 LOC ? GO:0000226 ... Q6B856 18787557 BindingDB: IC50=800nM, Ki=780nM
    136642 3e23:A (1.6) BS01 SAM ? GO:0008168 ... Q6N6X2 N/A
    136643 3e24:A (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136644 3e24:B (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136645 3e25:A (2.7) BS01 UDP 2.4.1.266 GO:0000287 ... P9WMW9 19015727
    136646 3e27:A (2.2) BS01 DND N/A GO:0003824 ... N/A 19716475
    136647 3e27:B (2.2) BS01 DND N/A GO:0003824 ... N/A 19716475
    136648 3e27:C (2.2) BS01 DND N/A GO:0003824 ... N/A 19716475
    136649 3e27:D (2.2) BS01 DND N/A GO:0003824 ... N/A 19716475
    136650 3e28:A (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136651 3e28:B (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136652 3e28:C (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136653 3e28:D (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136654 3e28:E (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136655 3e28:F (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136656 3e2a:A (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136657 3e2a:B (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136658 3e2a:C (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136659 3e2a:D (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136660 3e2a:E (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136661 3e2a:F (2.301) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136662 3e2a:F (2.301) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 19459702
    136663 3e2b:A (2.0) BS01 peptide ? GO:0000132 ... Q24117 18948118
    136664 3e2c:A (1.8) BS01 ZN 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136665 3e2c:A (1.8) BS02 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136666 3e2c:A (1.8) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136667 3e2c:A (1.8) BS04 EDO 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136668 3e2c:A (1.8) BS05 EDO 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136669 3e2c:B (1.8) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136670 3e2c:B (1.8) BS02 HEM 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136671 3e2c:B (1.8) BS03 ZN 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136672 3e2c:B (1.8) BS04 EDO 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136673 3e2c:B (1.8) BS05 EDO 1.16.3.1 GO:0004322 ... P0ABD3 19439409
    136674 3e2d:A (1.4) BS01 ZN 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136675 3e2d:A (1.4) BS02 ZN 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136676 3e2d:A (1.4) BS03 MG 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136677 3e2d:B (1.4) BS01 ZN 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136678 3e2d:B (1.4) BS02 ZN 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136679 3e2d:B (1.4) BS03 MG 3.1.3.1 GO:0004035 ... Q93P54 18977465
    136680 3e2e:A (3.0) BS01 rna 2.7.7.6 GO:0000428 ... P00573 18948533
    136681 3e2e:A (3.0) BS02 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136682 3e2e:A (3.0) BS03 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136683 3e2h:A (3.8) BS01 peptide ? N/A P01897 18941216
    136684 3e2h:B (3.8) BS01 peptide ? GO:0002250 ... P01738 18941216
    136685 3e2h:C (3.8) BS01 peptide ? N/A A2NTY6 18941216
    136686 3e2i:A (2.01) BS01 ZN 2.7.1.21 GO:0004797 ... Q0H0G9 N/A
    136687 3e2j:A (2.9) BS01 MG 3.6.3.14 N/A P22027 18768789
    136688 3e2j:B (2.9) BS01 MG 3.6.3.14 N/A P22027 18768789
    136689 3e2j:C (2.9) BS01 MG 3.6.3.14 N/A P22027 18768789
    136690 3e2m:A (2.0) BS01 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    BindingDB: IC50=0.4nM
    136691 3e2m:B (2.0) BS01 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    BindingDB: IC50=0.4nM
    136692 3e2m:B (2.0) BS02 E2M ? N/A P20701 18783948 MOAD: ic50=0.4nM
    BindingDB: IC50=0.4nM
    136693 3e2n:A (1.3) BS01 HEM 1.11.1.11
    1.11.1.5
    GO:0004601 ... P00431
    P48534
    18771292
    136694 3e2o:A (1.06) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18771292
    136695 3e2q:A (1.75) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736
    136696 3e2q:A (1.75) BS02 HYP 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736
    136697 3e2r:A (1.85) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736
    136698 3e2r:A (1.85) BS02 TFB 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736 MOAD: Ki=1.5mM
    136699 3e2s:A (2.0) BS01 PRO 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736
    136700 3e2s:A (2.0) BS02 FAD 1.2.1.88
    1.5.5.2
    GO:0003842 ... P09546 19140736
    136701 3e2t:A (1.9) BS01 FE 1.14.16.4 GO:0004497 ... P70080 18937498
    136702 3e2t:A (1.9) BS02 IMD 1.14.16.4 GO:0004497 ... P70080 18937498
    136703 3e2t:A (1.9) BS03 TRP 1.14.16.4 GO:0004497 ... P70080 18937498
    136704 3e2u:A (2.6) BS01 peptide ? N/A Q14203 17828277
    136705 3e2u:A (2.6) BS02 peptide ? N/A Q14203 17828277
    136706 3e2u:B (2.6) BS01 peptide ? N/A Q14203 17828277
    136707 3e2u:B (2.6) BS02 peptide ? N/A Q14203 17828277
    136708 3e2u:C (2.6) BS01 peptide ? N/A Q14203 17828277
    136709 3e2u:C (2.6) BS02 peptide ? N/A Q14203 17828277
    136710 3e2u:D (2.6) BS01 peptide ? N/A Q14203 17828277
    136711 3e2u:D (2.6) BS02 peptide ? N/A Q14203 17828277
    136712 3e2v:A (1.5) BS01 MG ? GO:0005829 ... A6ZKP4 N/A
    136713 3e2v:B (1.5) BS01 MG ? GO:0005829 ... A6ZKP4 N/A
    136714 3e2w:A (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136715 3e2w:B (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136716 3e2w:C (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136717 3e2w:D (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136718 3e2w:E (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136719 3e2w:F (2.296) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 19459702
    136720 3e2w:F (2.296) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 19459702
    136721 3e2x:A (2.55) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136722 3e2x:A (2.55) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136723 3e2x:B (2.55) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136724 3e2x:B (2.55) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136725 3e2x:B (2.55) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136726 3e2x:B (2.55) BS04 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136727 3e2x:B (2.55) BS05 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136728 3e2y:A (2.26) BS01 GLN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136729 3e2y:A (2.26) BS02 PMP 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136730 3e2y:B (2.26) BS01 PMP 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136731 3e2y:B (2.26) BS02 GLN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136732 3e2z:A (2.81) BS01 KYN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136733 3e2z:A (2.81) BS02 KYN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136734 3e2z:B (2.81) BS01 KYN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136735 3e2z:B (2.81) BS02 PMP 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136736 3e2z:B (2.81) BS03 KYN 2.6.1.63
    2.6.1.7
    4.4.1.13
    GO:0005739 ... Q71RI9 29712768
    136737 3e30:B (2.45) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 19246009
    136738 3e30:B (2.45) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 19246009
    136739 3e30:B (2.45) BS03 ED4 2.5.1.58 GO:0003824 ... Q02293 19246009
    136740 3e31:A (2.95) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136741 3e31:B (2.95) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136742 3e32:B (2.45) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 19246009
    136743 3e32:B (2.45) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 19246009
    136744 3e32:B (2.45) BS03 ED2 2.5.1.58 GO:0003824 ... Q02293 19246009
    136745 3e33:A (1.9) BS01 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 19246009
    136746 3e33:B (1.9) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 19246009
    136747 3e33:B (1.9) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 19246009
    136748 3e33:B (1.9) BS03 ED7 2.5.1.58 GO:0003824 ... Q02293 19246009
    136749 3e34:A (2.05) BS01 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 19246009
    136750 3e34:A (2.05) BS02 ED1 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 19246009
    136751 3e34:B (2.05) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 19246009
    136752 3e34:B (2.05) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 19246009
    136753 3e34:B (2.05) BS03 ED1 2.5.1.58 GO:0003824 ... Q02293 19246009
    136754 3e37:A (1.8) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 19246009
    136755 3e37:B (1.8) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 19246009
    136756 3e37:B (1.8) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 19246009
    136757 3e37:B (1.8) BS03 ED5 2.5.1.58 GO:0003824 ... P49356 19246009 MOAD: ic50=4050nM
    136758 3e37:B (1.8) BS04 ZN 2.5.1.58 GO:0003824 ... P49356 19246009
    136759 3e38:A (2.2) BS01 ZN ? GO:0004534 ... A6L615 N/A
    136760 3e38:A (2.2) BS02 ZN ? GO:0004534 ... A6L615 N/A
    136761 3e38:A (2.2) BS03 ZN ? GO:0004534 ... A6L615 N/A
    136762 3e38:B (2.2) BS01 ZN ? GO:0004534 ... A6L615 N/A
    136763 3e38:B (2.2) BS02 ZN ? GO:0004534 ... A6L615 N/A
    136764 3e38:B (2.2) BS03 ZN ? GO:0004534 ... A6L615 N/A
    136765 3e39:A (1.7) BS01 FMN ? GO:0016491 ... Q314Q8 N/A
    136766 3e39:A (1.7) BS02 FMN ? GO:0016491 ... Q314Q8 N/A
    136767 3e39:B (1.7) BS01 FMN ? GO:0016491 ... Q314Q8 N/A
    136768 3e39:B (1.7) BS02 FMN ? GO:0016491 ... Q314Q8 N/A
    136769 3e3b:X (3.2) BS01 CCK 2.7.11.1 GO:0000785 ... P19784 19193990
    136770 3e3c:A (2.5) BS01 HHG ? N/A Q7DB61 19228114
    136771 3e3c:B (2.5) BS01 HHG ? N/A Q7DB61 19228114
    136772 3e3d:A (1.55) BS01 I3C 3.2.1.17 GO:0003796 ... P00698 19020357
    136773 3e3f:A (2.3) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136774 3e3f:A (2.3) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136775 3e3f:A (2.3) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136776 3e3f:A (2.3) BS04 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136777 3e3f:B (2.3) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136778 3e3f:B (2.3) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136779 3e3g:A (2.3) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136780 3e3g:A (2.3) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136781 3e3g:A (2.3) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136782 3e3g:A (2.3) BS04 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136783 3e3g:A (2.3) BS05 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136784 3e3g:B (2.3) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136785 3e3g:B (2.3) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136786 3e3g:B (2.3) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136787 3e3g:B (2.3) BS04 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136788 3e3g:C (2.3) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136789 3e3g:C (2.3) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136790 3e3g:D (2.3) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136791 3e3g:D (2.3) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136792 3e3g:D (2.3) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136793 3e3g:E (2.3) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136794 3e3g:E (2.3) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136795 3e3g:E (2.3) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136796 3e3g:E (2.3) BS04 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136797 3e3g:F (2.3) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136798 3e3g:F (2.3) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136799 3e3g:F (2.3) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136800 3e3h:A (2.15) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 18434422

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).