SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    136801 3e3h:A (2.15) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 18434422
    136802 3e3h:A (2.15) BS03 EBP 3.1.8.1 GO:0004063 ... P0A434 18434422
    136803 3e3h:B (2.15) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 18434422
    136804 3e3h:B (2.15) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 18434422
    136805 3e3i:A (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136806 3e3i:A (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136807 3e3i:B (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136808 3e3i:B (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136809 3e3i:B (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136810 3e3i:C (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136811 3e3i:C (2.0) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136812 3e3i:C (2.0) BS03 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136813 3e3i:D (2.0) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136814 3e3i:D (2.0) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136815 3e3i:D (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136816 3e3i:E (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136817 3e3i:E (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136818 3e3i:E (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136819 3e3i:F (2.0) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136820 3e3i:F (2.0) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136821 3e3i:F (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136822 3e3i:G (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136823 3e3i:G (2.0) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136824 3e3i:H (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136825 3e3i:H (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136826 3e3i:H (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136827 3e3i:I (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136828 3e3i:I (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136829 3e3i:I (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136830 3e3i:J (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136831 3e3i:J (2.0) BS02 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136832 3e3i:J (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136833 3e3i:K (2.0) BS01 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136834 3e3i:K (2.0) BS02 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136835 3e3i:L (2.0) BS01 SO4 4.2.1.1 GO:0004089 ... P45148 20359198
    136836 3e3i:L (2.0) BS02 ZN 4.2.1.1 GO:0004089 ... P45148 20359198
    136837 3e3i:L (2.0) BS03 BCT 4.2.1.1 GO:0004089 ... P45148 20359198
    136838 3e3j:B (6.7) BS01 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136839 3e3j:B (6.7) BS02 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136840 3e3j:B (6.7) BS03 rna 2.7.7.6 GO:0000428 ... P00573 18948533
    136841 3e3j:C (6.7) BS01 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136842 3e3j:C (6.7) BS02 dna 2.7.7.6 GO:0000428 ... P00573 18948533
    136843 3e3j:C (6.7) BS03 rna 2.7.7.6 GO:0000428 ... P00573 18948533
    136844 3e3k:A (2.8) BS01 HCT ? GO:0005515 ... P33590 18759453
    136845 3e3k:B (2.8) BS01 HCT ? GO:0005515 ... P33590 18759453
    136846 3e3k:C (2.8) BS01 HCT ? GO:0005515 ... P33590 18759453
    136847 3e3n:A (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136848 3e3n:A (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136849 3e3n:B (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136850 3e3n:B (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136851 3e3n:C (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136852 3e3n:C (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136853 3e3n:D (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136854 3e3n:D (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136855 3e3n:E (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136856 3e3n:E (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136857 3e3n:F (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136858 3e3n:F (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136859 3e3n:G (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136860 3e3n:G (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136861 3e3n:H (2.7) BS01 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136862 3e3n:H (2.7) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136863 3e3o:A (2.6) BS01 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136864 3e3o:A (2.6) BS02 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136865 3e3o:B (2.6) BS01 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136866 3e3o:B (2.6) BS02 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136867 3e3o:C (2.6) BS01 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136868 3e3o:C (2.6) BS02 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136869 3e3o:D (2.6) BS01 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136870 3e3o:D (2.6) BS02 IMP 2.4.1.1 GO:0004645 ... P00489 34473107
    136871 3e3q:A (2.95) BS01 peptide ? N/A P01897 18941216
    136872 3e3q:B (2.95) BS01 peptide ? N/A P01897 18941216
    136873 3e3q:C (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136874 3e3q:D (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136875 3e3q:E (2.95) BS01 peptide N/A N/A N/A 18941216
    136876 3e3q:F (2.95) BS01 peptide N/A N/A N/A 18941216
    136877 3e3q:H (2.95) BS01 peptide ? N/A P01897 18941216
    136878 3e3q:I (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136879 3e3q:J (2.95) BS01 peptide N/A N/A N/A 18941216
    136880 3e3q:L (2.95) BS01 peptide ? N/A P01897 18941216
    136881 3e3q:M (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136882 3e3q:N (2.95) BS01 peptide N/A N/A N/A 18941216
    136883 3e3q:P (2.95) BS01 peptide ? N/A P01897 18941216
    136884 3e3q:R (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136885 3e3q:S (2.95) BS01 peptide N/A N/A N/A 18941216
    136886 3e3q:U (2.95) BS01 peptide ? N/A P01897 18941216
    136887 3e3q:V (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136888 3e3q:W (2.95) BS01 peptide N/A N/A N/A 18941216
    136889 3e3q:Y (2.95) BS01 peptide ? N/A P01897 18941216
    136890 3e3q:Z (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136891 3e3q:a (2.95) BS01 peptide N/A N/A N/A 18941216
    136892 3e3q:c (2.95) BS01 peptide ? N/A P01897 18941216
    136893 3e3q:d (2.95) BS01 peptide ? GO:0002250 ... P01738 18941216
    136894 3e3q:e (2.95) BS01 peptide N/A N/A N/A 18941216
    136895 3e3r:A (2.65) BS01 CA ? GO:0005509 ... Q13938 18775726
    136896 3e3r:A (2.65) BS02 CA ? GO:0005509 ... Q13938 18775726
    136897 3e3r:A (2.65) BS03 CA ? GO:0005509 ... Q13938 18775726
    136898 3e3r:A (2.65) BS04 CA ? GO:0005509 ... Q13938 18775726
    136899 3e3r:B (2.65) BS01 CA ? GO:0005509 ... Q13938 18775726
    136900 3e3r:B (2.65) BS02 CA ? GO:0005509 ... Q13938 18775726
    136901 3e3r:B (2.65) BS03 CA ? GO:0005509 ... Q13938 18775726
    136902 3e3r:B (2.65) BS04 CA ? GO:0005509 ... Q13938 18775726
    136903 3e3s:A (1.73) BS01 I3C ? GO:0031410 ... P02883 19020357
    136904 3e3s:A (1.73) BS02 I3C ? GO:0031410 ... P02883 19020357
    136905 3e3s:A (1.73) BS03 I3C ? GO:0031410 ... P02883 19020357
    136906 3e3t:A (1.6) BS01 I3C 3.4.21.36 GO:0004252 ... P00772 19020357
    136907 3e3t:A (1.6) BS02 I3C 3.4.21.36 GO:0004252 ... P00772 19020357
    136908 3e3t:A (1.6) BS03 I3C 3.4.21.36 GO:0004252 ... P00772 19020357
    136909 3e3t:A (1.6) BS04 I3C 3.4.21.36 GO:0004252 ... P00772 19020357
    136910 3e3u:A (1.56) BS01 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    BindingDB: IC50=13nM
    136911 3e3u:A (1.56) BS02 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    BindingDB: IC50=13nM
    136912 3e3u:A (1.56) BS03 NVC 3.5.1.88 GO:0006412 ... P9WIJ3 19008098 MOAD: ic50=0.013uM
    BindingDB: IC50=13nM
    136913 3e3y:A (2.13) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136914 3e3y:A (2.13) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136915 3e3y:A (2.13) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136916 3e3y:B (2.13) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136917 3e3y:B (2.13) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136918 3e3y:B (2.13) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136919 3e3z:A (1.7) BS01 MG 3.6.3.14 N/A P22027 18768789
    136920 3e3z:A (1.7) BS02 PA0 3.6.3.14 N/A P22027 18768789
    136921 3e40:A (2.1) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136922 3e40:A (2.1) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136923 3e40:A (2.1) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136924 3e40:B (2.1) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136925 3e40:B (2.1) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136926 3e40:B (2.1) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136927 3e41:A (2.73) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136928 3e41:A (2.73) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136929 3e41:A (2.73) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136930 3e41:B (2.73) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136931 3e41:B (2.73) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136932 3e41:B (2.73) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136933 3e42:A (2.68) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136934 3e42:A (2.68) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136935 3e42:A (2.68) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136936 3e42:B (2.68) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136937 3e42:B (2.68) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136938 3e42:B (2.68) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136939 3e43:A (2.73) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136940 3e43:A (2.73) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136941 3e43:B (2.73) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136942 3e43:B (2.73) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136943 3e44:A (2.52) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136944 3e44:A (2.52) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136945 3e44:A (2.52) BS03 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136946 3e44:A (2.52) BS04 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136947 3e44:A (2.52) BS05 MN 3.1.21.4 GO:0003677 ... P17743 18762194
    136948 3e44:A (2.52) BS06 MN 3.1.21.4 GO:0003677 ... P17743 18762194
    136949 3e44:B (2.52) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136950 3e44:B (2.52) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136951 3e44:B (2.52) BS03 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136952 3e44:B (2.52) BS04 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136953 3e44:B (2.52) BS05 MN 3.1.21.4 GO:0003677 ... P17743 18762194
    136954 3e44:B (2.52) BS06 MN 3.1.21.4 GO:0003677 ... P17743 18762194
    136955 3e45:A (2.78) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136956 3e45:A (2.78) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136957 3e45:A (2.78) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136958 3e45:B (2.78) BS01 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136959 3e45:B (2.78) BS02 dna 3.1.21.4 GO:0003677 ... P17743 18762194
    136960 3e45:B (2.78) BS03 CA 3.1.21.4 GO:0003677 ... P17743 18762194
    136961 3e47:K (3.0) BS01 ESY 3.4.25.1 GO:0004298 ... P30656 16537370
    136962 3e47:Y (3.0) BS01 ESY 3.4.25.1 GO:0004298 ... P30656 16537370
    136963 3e49:A (1.75) BS01 ZN ? GO:0043720 ... Q13GE9 N/A
    136964 3e49:B (1.75) BS01 ZN ? GO:0043720 ... Q13GE9 N/A
    136965 3e49:C (1.75) BS01 ZN ? GO:0043720 ... Q13GE9 N/A
    136966 3e49:D (1.75) BS01 ZN ? GO:0043720 ... Q13GE9 N/A
    136967 3e4a:A (2.6) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 20498699
    136968 3e4a:A (2.6) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 20498699
    136969 3e4a:A (2.6) BS03 QIX 3.4.24.56 GO:0001540 ... P14735 20498699
    136970 3e4a:B (2.6) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 20498699
    136971 3e4a:B (2.6) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 20498699
    136972 3e4a:B (2.6) BS03 QIX 3.4.24.56 GO:0001540 ... P14735 20498699
    136973 3e4d:A (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136974 3e4d:B (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136975 3e4d:C (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136976 3e4d:D (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136977 3e4d:E (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136978 3e4d:F (2.01) BS01 MG 3.1.2.12 GO:0005829 ... A9CJ11 19653299
    136979 3e4e:A (2.6) BS01 HEM 1.14.13.n7
    1.14.14.1
    GO:0001676 ... P05181 18818195
    136980 3e4e:A (2.6) BS02 4PZ 1.14.13.n7
    1.14.14.1
    GO:0001676 ... P05181 18818195
    136981 3e4e:B (2.6) BS01 HEM 1.14.13.n7
    1.14.14.1
    GO:0001676 ... P05181 18818195
    136982 3e4e:B (2.6) BS02 4PZ 1.14.13.n7
    1.14.14.1
    GO:0001676 ... P05181 18818195
    136983 3e4g:A (0.96) BS01 MG 3.6.3.14 N/A P22027 18768789
    136984 3e4n:A (1.21) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 19204297
    136985 3e4o:A (2.3) BS01 MG 2.7.13.3 N/A P13633 18725229
    136986 3e4o:B (2.3) BS01 MG 2.7.13.3 N/A P13633 18725229
    136987 3e4q:A (2.75) BS01 CA 2.7.13.3 N/A P13633 18725229
    136988 3e4q:B (2.75) BS01 CA 2.7.13.3 N/A P13633 18725229
    136989 3e4v:A (1.4) BS01 FMN ? GO:0010181 ... Q1H3S7 N/A
    136990 3e4v:A (1.4) BS02 FMN ? GO:0010181 ... Q1H3S7 N/A
    136991 3e4v:B (1.4) BS01 FMN ? GO:0010181 ... Q1H3S7 N/A
    136992 3e4v:B (1.4) BS02 FMN ? GO:0010181 ... Q1H3S7 N/A
    136993 3e4w:A (1.8) BS01 HEM 1.11.1.- GO:0004096 ... Q73WB6 19827095
    136994 3e4w:B (1.8) BS01 HEM 1.11.1.- GO:0004096 ... Q73WB6 19827095
    136995 3e4y:A (2.6) BS01 HEM 1.11.1.- GO:0004096 ... Q73WB6 19827095
    136996 3e4z:A (2.28) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 19896952
    136997 3e4z:A (2.28) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 19896952
    136998 3e4z:B (2.28) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 19896952
    136999 3e4z:B (2.28) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 19896952
    137000 3e50:A (2.3) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 19896952

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).