SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    140801 3fg8:D (1.8) BS01 3PB ? N/A Q0S7I6 N/A
    140802 3fg8:E (1.8) BS01 3PB ? N/A Q0S7I6 N/A
    140803 3fg8:F (1.8) BS01 3PB ? N/A Q0S7I6 N/A
    140804 3fga:C (2.7) BS01 peptide 3.1.3.16 GO:0000159 ... P67775 19716788
    140805 3fga:C (2.7) BS02 MN 3.1.3.16 GO:0000159 ... P67775 19716788
    140806 3fga:C (2.7) BS03 MN 3.1.3.16 GO:0000159 ... P67775 19716788
    140807 3fgc:A (2.3) BS01 FMN 1.14.14.3 GO:0005829 ... P07740 19435287
    140808 3fgd:A (1.33) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    140809 3fgd:A (1.33) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    140810 3fgd:A (1.33) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    140811 3fgd:A (1.33) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    140812 3fgd:A (1.33) BS05 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    140813 3fgd:A (1.33) BS06 BYA 3.4.24.27 GO:0004222 ... P00800 N/A
    140814 3fge:A (1.74) BS01 CA ? GO:0010181 ... Q082D2 N/A
    140815 3fgg:A (2.3) BS01 ZN ? N/A Q739E5 N/A
    140816 3fgg:A (2.3) BS02 ZN ? N/A Q739E5 N/A
    140817 3fgg:B (2.3) BS01 ZN ? N/A Q739E5 N/A
    140818 3fgg:B (2.3) BS02 ZN ? N/A Q739E5 N/A
    140819 3fgg:B (2.3) BS03 ZN ? N/A Q739E5 N/A
    140820 3fgo:A (2.5) BS01 MG 7.2.2.10 GO:0000166 ... P04191 19289472
    140821 3fgo:A (2.5) BS02 MF4 7.2.2.10 GO:0000166 ... P04191 19289472
    140822 3fgo:A (2.5) BS03 K 7.2.2.10 GO:0000166 ... P04191 19289472
    140823 3fgo:A (2.5) BS04 CZA 7.2.2.10 GO:0000166 ... P04191 19289472
    140824 3fgo:A (2.5) BS05 ACP 7.2.2.10 GO:0000166 ... P04191 19289472
    140825 3fgo:B (2.5) BS01 MG 7.2.2.10 GO:0000166 ... P04191 19289472
    140826 3fgo:B (2.5) BS02 MF4 7.2.2.10 GO:0000166 ... P04191 19289472
    140827 3fgo:B (2.5) BS03 K 7.2.2.10 GO:0000166 ... P04191 19289472
    140828 3fgo:B (2.5) BS04 CZA 7.2.2.10 GO:0000166 ... P04191 19289472
    140829 3fgo:B (2.5) BS05 ACP 7.2.2.10 GO:0000166 ... P04191 19289472
    140830 3fgs:A (1.8) BS01 CO3 ? GO:0005576 ... P02787 19219998
    140831 3fgs:A (1.8) BS02 FE ? GO:0005576 ... P02787 19219998
    140832 3fgu:A (2.15) BS01 BGC 2.7.1.1 GO:0001678 ... P35557 22101819
    140833 3fgu:A (2.15) BS02 ANP 2.7.1.1 GO:0001678 ... P35557 22101819
    140834 3fgz:A (2.0) BS01 MN ? GO:0000156 ... P0AE67 19646451
    140835 3fgz:A (2.0) BS02 BEF ? GO:0000156 ... P0AE67 19646451
    140836 3fgz:B (2.0) BS01 MN ? GO:0000156 ... P0AE67 19646451
    140837 3fgz:B (2.0) BS02 BEF ? GO:0000156 ... P0AE67 19646451
    140838 3fh0:A (2.15) BS01 ADP ? N/A A6T8F5 N/A
    140839 3fh0:B (2.15) BS01 ADP ? N/A A6T8F5 N/A
    140840 3fh4:A (1.95) BS01 ZN 3.4.11.10 GO:0006508 ... Q01693 19233285
    140841 3fh4:A (1.95) BS02 ZN 3.4.11.10 GO:0006508 ... Q01693 19233285
    140842 3fh5:A (1.63) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900
    140843 3fh5:A (1.63) BS02 24P 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900 MOAD: ic50=87nM
    BindingDB: IC50=449nM
    140844 3fh7:A (2.05) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900
    140845 3fh7:A (2.05) BS02 25P 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900 MOAD: Kd=25nM
    140846 3fh8:A (1.67) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900
    140847 3fh8:A (1.67) BS02 27P 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900 MOAD: ic50=180nM
    BindingDB: IC50=120nM
    140848 3fh9:A (1.62) BS01 HEM ? GO:0004601 ... D0VX09 N/A
    140849 3fh9:B (1.62) BS01 HEM ? GO:0004601 ... D0VX08 N/A
    140850 3fha:A (2.0) BS01 CA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140851 3fha:B (2.0) BS01 CA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140852 3fha:C (2.0) BS01 CA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140853 3fha:D (2.0) BS01 CA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140854 3fhb:A (2.3) BS01 GAB 2.4.2.- GO:0003950 ... Q9Y6F1 19354255 MOAD: Kd>2uM
    140855 3fhd:A (1.85) BS01 MG ? GO:0003677 ... P88925 19843164
    140856 3fhe:A (2.16) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900
    140857 3fhe:A (2.16) BS02 28P 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 19950900 BindingDB: IC50=6.0nM, Kd=350nM, Ki=3.0nM
    140858 3fhi:A (2.0) BS01 ANP 2.7.11.11 GO:0000287 ... P05132 15692043
    140859 3fhi:A (2.0) BS02 MN 2.7.11.11 GO:0000287 ... P05132 15692043
    140860 3fhi:B (2.0) BS01 ANP ? GO:0005952 ... P00514 15692043
    140861 3fhj:A (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140862 3fhj:A (2.65) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140863 3fhj:B (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140864 3fhj:B (2.65) BS02 PO4 6.1.1.2 GO:0000166 ... P00953 19174517
    140865 3fhj:B (2.65) BS03 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140866 3fhj:C (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140867 3fhj:C (2.65) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140868 3fhj:D (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140869 3fhj:D (2.65) BS02 PO4 6.1.1.2 GO:0000166 ... P00953 19174517
    140870 3fhj:D (2.65) BS03 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140871 3fhj:E (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140872 3fhj:E (2.65) BS02 PO4 6.1.1.2 GO:0000166 ... P00953 19174517
    140873 3fhj:E (2.65) BS03 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140874 3fhj:F (2.65) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140875 3fhj:F (2.65) BS02 PO4 6.1.1.2 GO:0000166 ... P00953 19174517
    140876 3fhj:F (2.65) BS03 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140877 3fhm:A (2.7) BS01 AMP ? N/A A9CIP4 N/A
    140878 3fhm:A (2.7) BS02 NAI ? N/A A9CIP4 N/A
    140879 3fhm:A (2.7) BS03 NAI ? N/A A9CIP4 N/A
    140880 3fhm:B (2.7) BS01 AMP ? N/A A9CIP4 N/A
    140881 3fhm:B (2.7) BS02 NAI ? N/A A9CIP4 N/A
    140882 3fhm:B (2.7) BS03 NAI ? N/A A9CIP4 N/A
    140883 3fhm:C (2.7) BS01 NAI ? N/A A9CIP4 N/A
    140884 3fhm:C (2.7) BS02 AMP ? N/A A9CIP4 N/A
    140885 3fhm:C (2.7) BS03 NAI ? N/A A9CIP4 N/A
    140886 3fhm:D (2.7) BS01 NAI ? N/A A9CIP4 N/A
    140887 3fhm:D (2.7) BS02 AMP ? N/A A9CIP4 N/A
    140888 3fhm:D (2.7) BS03 NAI ? N/A A9CIP4 N/A
    140889 3fhp:B (2.0) BS01 peptide ? N/A P01315 19770501
    140890 3fhp:D (2.0) BS01 peptide ? N/A P01315 19770501
    140891 3fhq:A (2.452) BS01 BMA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140892 3fhq:A (2.452) BS02 MAN 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140893 3fhq:A (2.452) BS03 NGT 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140894 3fhq:B (2.452) BS01 BMA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140895 3fhq:B (2.452) BS02 MAN 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140896 3fhq:B (2.452) BS03 NGT 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140897 3fhq:D (2.452) BS01 BMA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140898 3fhq:D (2.452) BS02 MAN 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140899 3fhq:D (2.452) BS03 NGT 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140900 3fhq:F (2.452) BS01 BMA 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140901 3fhq:F (2.452) BS02 MAN 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140902 3fhq:F (2.452) BS03 NGT 3.2.1.96 GO:0004553 ... Q9ZB22 19252736
    140903 3fhr:A (1.9) BS01 P4O 2.7.11.1 GO:0004672 ... Q16644 19937655 BindingDB: IC50=210nM
    140904 3fht:A (2.2) BS01 rna 3.6.4.13 GO:0003676 ... Q9UMR2 19219046
    140905 3fht:A (2.2) BS02 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 19219046
    140906 3fht:B (2.2) BS01 rna 3.6.4.13 GO:0003676 ... Q9UMR2 19219046
    140907 3fht:B (2.2) BS02 ANP 3.6.4.13 GO:0003676 ... Q9UMR2 19219046
    140908 3fhv:A (1.9) BS01 peptide ? N/A Q8Z1L1 19626704
    140909 3fhv:B (1.9) BS01 peptide ? N/A Q8Z1L1 19626704
    140910 3fhx:A (2.5) BS01 ATP 2.7.1.35 GO:0000287 ... O00764 19351586
    140911 3fhx:A (2.5) BS02 PXL 2.7.1.35 GO:0000287 ... O00764 19351586
    140912 3fhx:A (2.5) BS03 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140913 3fhx:A (2.5) BS04 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140914 3fhx:A (2.5) BS05 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140915 3fhx:A (2.5) BS06 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140916 3fhx:B (2.5) BS01 ATP 2.7.1.35 GO:0000287 ... O00764 19351586
    140917 3fhx:B (2.5) BS02 PXL 2.7.1.35 GO:0000287 ... O00764 19351586
    140918 3fhx:B (2.5) BS03 PLP 2.7.1.35 GO:0000287 ... O00764 19351586
    140919 3fhy:A (2.3) BS01 ATP 2.7.1.35 GO:0000287 ... O00764 19351586
    140920 3fhy:A (2.3) BS02 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140921 3fhy:A (2.3) BS03 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140922 3fhy:A (2.3) BS04 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140923 3fhy:B (2.3) BS01 ATP 2.7.1.35 GO:0000287 ... O00764 19351586
    140924 3fhy:B (2.3) BS02 SO4 2.7.1.35 GO:0000287 ... O00764 19351586
    140925 3fhz:A (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140926 3fhz:A (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140927 3fhz:A (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140928 3fhz:A (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140929 3fhz:B (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140930 3fhz:B (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140931 3fhz:B (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140932 3fhz:B (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140933 3fhz:B (3.27) BS05 ARG ? GO:0000987 ... P9WPY9 19265706
    140934 3fhz:C (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140935 3fhz:C (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140936 3fhz:C (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140937 3fhz:C (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140938 3fhz:D (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140939 3fhz:D (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140940 3fhz:D (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140941 3fhz:D (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140942 3fhz:E (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140943 3fhz:E (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140944 3fhz:E (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140945 3fhz:E (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140946 3fhz:F (3.27) BS01 dna ? GO:0000987 ... P9WPY9 19265706
    140947 3fhz:F (3.27) BS02 dna ? GO:0000987 ... P9WPY9 19265706
    140948 3fhz:F (3.27) BS03 ARG ? GO:0000987 ... P9WPY9 19265706
    140949 3fhz:F (3.27) BS04 ARG ? GO:0000987 ... P9WPY9 19265706
    140950 3fi0:A (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140951 3fi0:A (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140952 3fi0:B (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140953 3fi0:B (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140954 3fi0:C (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140955 3fi0:C (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140956 3fi0:D (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140957 3fi0:D (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140958 3fi0:E (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140959 3fi0:E (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140960 3fi0:F (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140961 3fi0:F (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140962 3fi0:G (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140963 3fi0:G (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140964 3fi0:H (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140965 3fi0:H (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140966 3fi0:I (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140967 3fi0:I (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140968 3fi0:J (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140969 3fi0:J (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140970 3fi0:K (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140971 3fi0:K (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140972 3fi0:L (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140973 3fi0:L (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140974 3fi0:M (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140975 3fi0:M (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140976 3fi0:N (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140977 3fi0:N (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140978 3fi0:O (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140979 3fi0:O (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140980 3fi0:P (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140981 3fi0:P (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140982 3fi0:Q (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140983 3fi0:Q (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140984 3fi0:R (2.7) BS01 TRP 6.1.1.2 GO:0000166 ... P00953 19174517
    140985 3fi0:R (2.7) BS02 AMP 6.1.1.2 GO:0000166 ... P00953 19174517
    140986 3fi2:A (2.28) BS01 JK1 2.7.11.24 GO:0004672 ... P53779 19261605 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    140987 3fi3:A (2.2) BS01 JK2 2.7.11.24 GO:0004672 ... P53779 19261605 MOAD: ic50=12nM
    BindingDB: IC50=9.0nM
    140988 3fi4:A (2.2) BS01 FI4 2.7.11.24 GO:0000165 ... Q16539 N/A
    140989 3fi8:A (2.3) BS01 ADP 2.7.1.32 N/A Q8IM71 N/A
    140990 3fi8:A (2.3) BS02 MG 2.7.1.32 N/A Q8IM71 N/A
    140991 3fi8:A (2.3) BS03 OPE 2.7.1.32 N/A Q8IM71 N/A
    140992 3fi8:A (2.3) BS04 OPE 2.7.1.32 N/A Q8IM71 N/A
    140993 3fia:A (1.45) BS01 CA ? GO:0005509 ... Q15811 N/A
    140994 3fib:A (2.1) BS01 CA ? GO:0007596 ... P02679 9207064
    140995 3fid:A (1.9) BS01 ZN ? N/A Q8ZPT3 19174515
    140996 3fid:A (1.9) BS02 ZN ? N/A Q8ZPT3 19174515
    140997 3fid:A (1.9) BS03 ZN ? N/A Q8ZPT3 19174515
    140998 3fid:A (1.9) BS04 ZN ? N/A Q8ZPT3 19174515
    140999 3fid:A (1.9) BS05 ZN ? N/A Q8ZPT3 19174515
    141000 3fid:B (1.9) BS01 ZN ? N/A Q8ZPT3 19174515

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).