SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14801 1fvp:A (2.7) BS02 FMA ? GO:0016705 ... P12745 15299728
    14802 1fvp:A (2.7) BS03 FMA ? GO:0016705 ... P12745 15299728
    14803 1fvp:B (2.7) BS01 FMA ? GO:0016705 ... P12745 15299728
    14804 1fvp:B (2.7) BS02 FMA ? GO:0016705 ... P12745 15299728
    14805 1fvp:B (2.7) BS03 FMA ? GO:0016705 ... P12745 15299728
    14806 1fvs:A (-1.00) BS01 CU 7.2.2.8 GO:0046872 ... P38995 11083871
    14807 1fvt:A (2.2) BS01 106 2.7.11.22 GO:0000082 ... P24941 11141566 BindingDB: IC50=60nM
    14808 1fvu:B (1.8) BS01 MG ? GO:0005576 ... P22030 11148028
    14809 1fvu:D (1.8) BS01 MG ? GO:0005576 ... P22030 11148028
    14810 1fvv:A (2.8) BS01 107 2.7.11.22 GO:0000082 ... P24941 11141566
    14811 1fvv:C (2.8) BS01 107 2.7.11.22 GO:0000082 ... P24941 11141566
    14812 1fvx:A (1.9) BS01 FMN ? GO:0009055 ... P00322 9063874
    14813 1fw0:A (1.9) BS01 KAI ? GO:0015276 ... P19491 11086992 BindingDB: EC50=380000nM, Ki=3690nM
    14814 1fw1:A (1.9) BS01 SO4 2.5.1.18
    5.2.1.2
    GO:0003824 ... O43708 11327815
    14815 1fw1:A (1.9) BS02 GSH 2.5.1.18
    5.2.1.2
    GO:0003824 ... O43708 11327815
    14816 1fw2:A (2.6) BS01 CA 3.1.1.32
    3.1.1.4
    GO:0004620 ... P0A921 11371166
    14817 1fw4:A (1.7) BS01 CA ? GO:0005509 ... P62157 11320306
    14818 1fw4:A (1.7) BS02 CA ? GO:0005509 ... P62157 11320306
    14819 1fw6:A (2.7) BS01 dna ? GO:0003684 ... Q56215 11172706
    14820 1fw6:A (2.7) BS02 dna ? GO:0003684 ... Q56215 11172706
    14821 1fw6:A (2.7) BS03 ADP ? GO:0003684 ... Q56215 11172706
    14822 1fw6:B (2.7) BS01 dna ? GO:0003684 ... Q56215 11172706
    14823 1fw6:B (2.7) BS02 dna ? GO:0003684 ... Q56215 11172706
    14824 1fw6:B (2.7) BS03 ADP ? GO:0003684 ... Q56215 11172706
    14825 1fwa:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14826 1fwa:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14827 1fwa:C (2.0) BS03 CO3 3.5.1.5 GO:0005515 ... P18314 9201965
    14828 1fwb:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14829 1fwb:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14830 1fwc:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14831 1fwc:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14832 1fwd:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14833 1fwd:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14834 1fwe:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14835 1fwe:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14836 1fwe:C (2.0) BS03 HAE 3.5.1.5 GO:0005515 ... P18314 9201965
    14837 1fwf:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14838 1fwf:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14839 1fwg:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14840 1fwg:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14841 1fwh:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14842 1fwh:C (2.0) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14843 1fwi:C (2.0) BS01 NI 3.5.1.5 GO:0005515 ... P18314 8702515
    14844 1fwj:C (2.2) BS01 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14845 1fwj:C (2.2) BS02 NI 3.5.1.5 GO:0005515 ... P18314 9201965
    14846 1fwk:A (2.1) BS01 ADP 2.7.1.39 GO:0004413 ... Q58504 11188689
    14847 1fwk:B (2.1) BS01 ADP 2.7.1.39 GO:0004413 ... Q58504 11188689
    14848 1fwk:C (2.1) BS01 ADP 2.7.1.39 GO:0004413 ... Q58504 11188689
    14849 1fwk:D (2.1) BS01 ADP 2.7.1.39 GO:0004413 ... Q58504 11188689
    14850 1fwm:A (2.2) BS01 SO4 2.1.1.45 GO:0000287 ... P0A884 16615077
    14851 1fwm:B (2.2) BS01 SO4 2.1.1.45 GO:0000287 ... P0A884 16615077
    14852 1fwn:A (1.94) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14853 1fwn:B (1.94) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14854 1fwq:A (-1.00) BS01 ZN ? GO:0005085 ... P47224 7651540
    14855 1fws:A (1.9) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 19228070
    14856 1fws:B (1.9) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 19228070
    14857 1fwt:A (1.9) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14858 1fwt:A (1.9) BS02 E4P 2.5.1.55 GO:0005737 ... O66496 11115499
    14859 1fwt:B (1.9) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14860 1fwu:A (1.9) BS01 SGA ? N/A Q61830 11152606
    14861 1fwv:A (2.2) BS01 SGA ? N/A Q61830 11152606
    14862 1fww:A (1.85) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 19228070
    14863 1fww:A (1.85) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 19228070
    14864 1fww:B (1.85) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 19228070
    14865 1fwx:A (1.6) BS01 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14866 1fwx:A (1.6) BS02 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14867 1fwx:A (1.6) BS03 CUA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14868 1fwx:B (1.6) BS01 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14869 1fwx:B (1.6) BS02 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14870 1fwx:B (1.6) BS03 CUA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14871 1fwx:C (1.6) BS01 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14872 1fwx:C (1.6) BS02 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14873 1fwx:C (1.6) BS03 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14874 1fwx:C (1.6) BS04 CUA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14875 1fwx:D (1.6) BS01 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14876 1fwx:D (1.6) BS02 CA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14877 1fwx:D (1.6) BS03 CUA 1.7.2.4 GO:0004129 ... Q51705 11024061
    14878 1fwy:A (2.3) BS01 UD1 2.3.1.157
    2.7.7.23
    GO:0000287 ... P0ACC7 10428949
    14879 1fwy:B (2.3) BS01 UD1 2.3.1.157
    2.7.7.23
    GO:0000287 ... P0ACC7 10428949
    14880 1fwz:A (2.3) BS01 SO4 ? GO:0003677 ... P0DJL7 11320302
    14881 1fwz:A (2.3) BS02 ZN ? GO:0003677 ... P0DJL7 11320302
    14882 1fx1:A (2.0) BS01 FMN ? GO:0009055 ... P00323 N/A
    14883 1fx4:A (1.9) BS01 MG 4.6.1.1 GO:0009190 ... Q99280 11157750
    14884 1fx5:A (2.2) BS01 MN ? GO:0030246 ... P22972 11090284
    14885 1fx5:A (2.2) BS02 CA ? GO:0030246 ... P22972 11090284
    14886 1fx5:B (2.2) BS01 MN ? GO:0030246 ... P22972 11090284
    14887 1fx5:B (2.2) BS02 CA ? GO:0030246 ... P22972 11090284
    14888 1fx6:A (2.06) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14889 1fx6:B (2.06) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14890 1fx7:A (2.0) BS01 CO ? GO:0003677 ... P9WMH1 11053439
    14891 1fx7:A (2.0) BS02 CO ? GO:0003677 ... P9WMH1 11053439
    14892 1fx7:A (2.0) BS03 CO ? GO:0003677 ... P9WMH1 11053439
    14893 1fx7:B (2.0) BS01 CO ? GO:0003677 ... P9WMH1 11053439
    14894 1fx7:B (2.0) BS02 CO ? GO:0003677 ... P9WMH1 11053439
    14895 1fx7:B (2.0) BS03 CO ? GO:0003677 ... P9WMH1 11053439
    14896 1fx7:C (2.0) BS01 CO ? GO:0003677 ... P9WMH1 11053439
    14897 1fx7:C (2.0) BS02 CO ? GO:0003677 ... P9WMH1 11053439
    14898 1fx7:C (2.0) BS03 CO ? GO:0003677 ... P9WMH1 11053439
    14899 1fx7:D (2.0) BS01 CO ? GO:0003677 ... P9WMH1 11053439
    14900 1fx7:D (2.0) BS02 CO ? GO:0003677 ... P9WMH1 11053439
    14901 1fx7:D (2.0) BS03 CO ? GO:0003677 ... P9WMH1 11053439
    14902 1fx8:A (2.2) BS01 GOL ? GO:0005372 ... P0AER0 11039922
    14903 1fx8:A (2.2) BS02 GOL ? GO:0005372 ... P0AER0 11039922
    14904 1fx9:A (2.0) BS01 CA 3.1.1.4 GO:0002446 ... P00592 11170377
    14905 1fx9:A (2.0) BS02 SO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14906 1fx9:A (2.0) BS03 MJI 3.1.1.4 GO:0002446 ... P00592 11170377
    14907 1fx9:B (2.0) BS01 MJI 3.1.1.4 GO:0002446 ... P00592 11170377
    14908 1fx9:B (2.0) BS02 CA 3.1.1.4 GO:0002446 ... P00592 11170377
    14909 1fx9:B (2.0) BS03 SO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14910 1fx9:B (2.0) BS04 SO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14911 1fxa:A (2.5) BS01 FES ? GO:0009055 ... P0A3C7 1902376
    14912 1fxa:B (2.5) BS01 FES ? GO:0009055 ... P0A3C7 1902376
    14913 1fxd:A (1.7) BS01 F3S ? GO:0005506 ... P00209 2056535
    14914 1fxf:A (1.85) BS01 CA 3.1.1.4 GO:0002446 ... P00592 11170377
    14915 1fxf:A (1.85) BS02 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14916 1fxf:A (1.85) BS03 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14917 1fxf:A (1.85) BS04 MJI 3.1.1.4 GO:0002446 ... P00592 11170377
    14918 1fxf:A (1.85) BS05 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14919 1fxf:B (1.85) BS01 MJI 3.1.1.4 GO:0002446 ... P00592 11170377
    14920 1fxf:B (1.85) BS02 CA 3.1.1.4 GO:0002446 ... P00592 11170377
    14921 1fxf:B (1.85) BS03 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14922 1fxf:B (1.85) BS04 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14923 1fxf:B (1.85) BS05 PO4 3.1.1.4 GO:0002446 ... P00592 11170377
    14924 1fxh:A (1.97) BS01 PAC 3.5.1.11 GO:0016787 ... P06875 11239085
    14925 1fxh:B (1.97) BS01 CA 3.5.1.11 GO:0016787 ... P06875 11239085
    14926 1fxh:B (1.97) BS02 PAC 3.5.1.11 GO:0016787 ... P06875 11239085
    14927 1fxi:A (2.2) BS01 FES ? GO:0009055 ... P00250 2123937
    14928 1fxi:B (2.2) BS01 FES ? GO:0009055 ... P00250 2123937
    14929 1fxi:C (2.2) BS01 FES ? GO:0009055 ... P00250 2123937
    14930 1fxi:D (2.2) BS01 FES ? GO:0009055 ... P00250 2123937
    14931 1fxl:A (1.8) BS01 rna ? GO:0003676 ... P26378 11175903
    14932 1fxo:A (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14933 1fxo:A (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14934 1fxo:A (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14935 1fxo:B (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14936 1fxo:B (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14937 1fxo:B (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14938 1fxo:C (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14939 1fxo:C (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14940 1fxo:C (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14941 1fxo:D (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14942 1fxo:D (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14943 1fxo:D (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14944 1fxo:E (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14945 1fxo:E (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14946 1fxo:E (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14947 1fxo:F (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14948 1fxo:F (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14949 1fxo:F (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14950 1fxo:G (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14951 1fxo:G (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14952 1fxo:G (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14953 1fxo:H (1.66) BS01 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14954 1fxo:H (1.66) BS02 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14955 1fxo:H (1.66) BS03 TMP 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    14956 1fxp:A (1.8) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14957 1fxp:B (1.8) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14958 1fxq:A (1.8) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14959 1fxq:A (1.8) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 11115499
    14960 1fxq:B (1.8) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11115499
    14961 1fxq:B (1.8) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 11115499
    14962 1fxr:A (2.3) BS01 SF4 ? GO:0005506 ... P00210 7803404
    14963 1fxr:B (2.3) BS01 SO4 ? GO:0005506 ... P00210 7803404
    14964 1fxr:B (2.3) BS02 SF4 ? GO:0005506 ... P00210 7803404
    14965 1fxs:A (2.3) BS01 NAP 1.1.1.271 GO:0005737 ... P32055 9862812
    14966 1fxu:A (2.2) BS01 PO4 2.4.2.1 GO:0003824 ... P55859 11134924
    14967 1fxu:A (2.2) BS02 GU7 2.4.2.1 GO:0003824 ... P55859 11134924
    14968 1fxv:A (2.25) BS01 PNN 3.5.1.11 GO:0016787 ... P06875 11239085
    14969 1fxv:B (2.25) BS01 PNN 3.5.1.11 GO:0016787 ... P06875 11239085
    14970 1fxv:B (2.25) BS02 CA 3.5.1.11 GO:0016787 ... P06875 11239085
    14971 1fxw:A (2.1) BS01 CA 3.1.1.47 GO:0003847 ... Q29460 11522926
    14972 1fxy:A (2.15) BS01 0G6 3.4.21.4 GO:0004252 ... P00742 9707558
    14973 1fy4:A (0.81) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 11134922
    14974 1fy5:A (0.81) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 11134922
    14975 1fy6:A (1.89) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14976 1fy6:A (1.89) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 11115499
    14977 1fy6:B (1.89) BS01 PO4 2.5.1.55 GO:0005737 ... O66496 11115499
    14978 1fy7:A (2.0) BS01 COA 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q08649 11106757
    14979 1fy8:E (1.7) BS01 CA 3.4.21.4 GO:0004252 ... P00763 11420435
    14980 1fyd:A (2.25) BS01 AMP 6.3.1.5 GO:0003952 ... P08164 11375500
    14981 1fyd:A (2.25) BS02 POP 6.3.1.5 GO:0003952 ... P08164 11375500
    14982 1fyf:A (1.65) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 11136973
    14983 1fyf:A (1.65) BS02 SSA 6.1.1.3 GO:0000166 ... P0A8M3 11136973
    14984 1fyf:B (1.65) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 11136973
    14985 1fyf:B (1.65) BS02 SSA 6.1.1.3 GO:0000166 ... P0A8M3 11136973
    14986 1fyk:A (2.5) BS01 dna ? GO:0003700 ... P22121 11599025
    14987 1fyn:A (2.3) BS01 peptide 2.7.10.2 N/A P06241 7664083
    14988 1fyr:A (2.4) BS01 peptide ? N/A P62993 11063574
    14989 1fyr:B (2.4) BS01 peptide ? N/A P62993 11063574
    14990 1fyr:C (2.4) BS01 peptide ? N/A P62993 11063574
    14991 1fyr:D (2.4) BS01 peptide ? N/A P62993 11063574
    14992 1fys:A (2.0) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 11513591
    14993 1fyt:A (2.6) BS01 peptide ? GO:0006955 ... P01903 11060013
    14994 1fyt:B (2.6) BS01 peptide ? GO:0006955 ... P01911 11060013
    14995 1fyt:D (2.6) BS01 peptide ? N/A P01848 11060013
    14996 1fyt:E (2.6) BS01 peptide ? N/A P01850 11060013
    14997 1fyu:A (2.6) BS01 GAL ? GO:0030246 ... P16404 11274466
    14998 1fyu:A (2.6) BS02 MN ? GO:0030246 ... P16404 11274466
    14999 1fyu:A (2.6) BS03 CA ? GO:0030246 ... P16404 11274466
    15000 1fyu:B (2.6) BS01 GAL ? GO:0030246 ... P16404 11274466

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).