SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    151001 3ioq:A (1.87) BS03 SO4 ? GO:0006508 ... Q84XA1 N/A
    151002 3ioq:A (1.87) BS04 SO4 ? GO:0006508 ... Q84XA1 N/A
    151003 3iot:A (3.5) BS01 CA ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151004 3iou:A (3.7) BS01 CA ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151005 3iou:B (3.7) BS01 ZN ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151006 3iou:C (3.7) BS01 CA ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151007 3iov:A (3.7) BS01 ZN ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151008 3iov:A (3.7) BS02 CA ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151009 3iow:C (3.5) BS01 CA ? GO:0005515 ... P0AEX9
    P42858
    19748341
    151010 3iox:A (1.8) BS01 SO3 ? N/A A8R5D9 20231452
    151011 3iox:A (1.8) BS02 CA ? N/A A8R5D9 20231452
    151012 3ioz:A (3.699) BS01 peptide ? GO:0005525 ... Q5QGG3 20124696
    151013 3ip0:A (0.89) BS01 MG 2.7.6.3 GO:0000287 ... P26281 12578370
    151014 3ip0:A (0.89) BS02 MG 2.7.6.3 GO:0000287 ... P26281 12578370
    151015 3ip0:A (0.89) BS03 APC 2.7.6.3 GO:0000287 ... P26281 12578370
    151016 3ip0:A (0.89) BS04 HHR 2.7.6.3 GO:0000287 ... P26281 12578370
    151017 3ip0:A (0.89) BS05 HHS 2.7.6.3 GO:0000287 ... P26281 12578370
    151018 3ip4:B (1.9) BS01 MG 6.3.5.- GO:0003824 ... P64201 19906721
    151019 3ip5:A (1.35) BS01 ALA ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=0.6uM
    151020 3ip6:A (1.4) BS01 PRO ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=0.25uM
    151021 3ip7:A (1.7) BS01 VAL ? GO:0006865 ... Q7CX36 20630861
    151022 3ip7:A (1.7) BS02 CA ? GO:0006865 ... Q7CX36 20630861
    151023 3ip7:A (1.7) BS03 CA ? GO:0006865 ... Q7CX36 20630861
    151024 3ip8:A (1.498) BS01 B85 4.1.1.76 GO:0047436 ... Q05115 19739187 MOAD: Ki=5.2mM
    151025 3ip9:A (1.8) BS01 ABU ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=2.4uM
    151026 3ipa:A (1.55) BS01 ALA ? GO:0006865 ... Q7CX36 20630861
    151027 3ipb:A (1.9) BS01 JZD ? GO:0001523 ... P02766 21059958 MOAD: ic50=0.2uM
    151028 3ipb:A (1.9) BS02 JZD ? GO:0001523 ... P02766 21059958 MOAD: ic50=0.2uM
    151029 3ipb:B (1.9) BS01 JZD ? GO:0001523 ... P02766 21059958 MOAD: ic50=0.2uM
    151030 3ipb:B (1.9) BS02 JZD ? GO:0001523 ... P02766 21059958 MOAD: ic50=0.2uM
    151031 3ipc:A (1.3) BS01 LEU ? GO:0006865 ... Q7CX36 20630861
    151032 3ipe:A (1.4) BS01 JZE ? GO:0001523 ... P02766 21059958
    151033 3ipe:B (1.4) BS01 JZE ? GO:0001523 ... P02766 21059958 MOAD: ic50=0.15uM
    151034 3iph:A (2.1) BS01 G11 2.7.11.24 GO:0000165 ... Q16539 19772287 MOAD: Ki=0.0000251mM
    BindingDB: IC50=316.23nM, Ki=25.12nM
    151035 3ipk:A (2.04) BS01 CA ? N/A C9E3B4 20231452
    151036 3ipk:B (2.04) BS01 CA ? N/A C9E3B4 20231452
    151037 3ipq:A (2.0) BS01 peptide ? GO:0003677 ... Q13133 20382159
    151038 3ipq:A (2.0) BS02 965 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=27nM
    BindingDB: EC50=200nM, IC50=235nM
    151039 3ips:A (2.26) BS01 peptide ? GO:0003677 ... Q13133 20382159
    151040 3ips:A (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    151041 3ips:B (2.26) BS01 peptide ? GO:0003677 ... Q13133 20382159
    151042 3ips:B (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    151043 3ipt:A (1.632) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 20080683
    151044 3ipt:B (1.632) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 20080683
    151045 3ipt:C (1.632) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 20080683
    151046 3ipt:D (1.632) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 20080683
    151047 3ipu:A (2.4) BS01 peptide ? GO:0003677 ... Q13133 20382159
    151048 3ipu:A (2.4) BS02 O40 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=48nM
    151049 3ipu:B (2.4) BS01 peptide ? GO:0003677 ... Q13133 20382159
    151050 3ipu:B (2.4) BS02 O40 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=48nM
    151051 3ipv:A (2.04) BS01 CA ? GO:0005509 ... P86352 21889532
    151052 3ipv:A (2.04) BS02 MN ? GO:0005509 ... P86352 21889532
    151053 3ipv:B (2.04) BS01 CA ? GO:0005509 ... P86353 21889532
    151054 3ipv:B (2.04) BS02 MN ? GO:0005509 ... P86353 21889532
    151055 3ipv:C (2.04) BS01 CA ? GO:0005509 ... P86352 21889532
    151056 3ipv:C (2.04) BS02 MN ? GO:0005509 ... P86352 21889532
    151057 3ipv:D (2.04) BS01 CA ? GO:0005509 ... P86353 21889532
    151058 3ipv:D (2.04) BS02 MN ? GO:0005509 ... P86353 21889532
    151059 3ipx:A (2.0) BS01 ADP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232
    151060 3ipx:A (2.0) BS02 B86 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232 MOAD: ic50=120nM
    BindingDB: IC50=>4000nM
    151061 3ipx:A (2.0) BS03 MG 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232
    151062 3ipy:A (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    151063 3ipy:A (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    151064 3ipy:B (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    151065 3ipy:B (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    151066 3iq0:A (1.79) BS01 ATP 2.7.1.- GO:0016772 ... A0A0H2VDX9 N/A
    151067 3iq0:B (1.79) BS01 ATP 2.7.1.- GO:0016772 ... A0A0H2VDX9 N/A
    151068 3iq5:A (2.05) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151069 3iq5:B (2.05) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151070 3iq5:C (2.05) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151071 3iq5:D (2.05) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151072 3iq6:A (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151073 3iq6:A (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151074 3iq6:B (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151075 3iq6:B (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151076 3iq6:C (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151077 3iq6:C (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151078 3iq6:D (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151079 3iq6:D (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151080 3iq6:E (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151081 3iq6:E (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151082 3iq6:F (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151083 3iq6:F (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151084 3iq6:G (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151085 3iq6:G (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151086 3iq6:H (2.35) BS01 HEM ? GO:0005506 ... P0ABE7 20515031
    151087 3iq6:H (2.35) BS02 ZN ? GO:0005506 ... P0ABE7 20515031
    151088 3iq7:A (2.0) BS01 PO4 2.7.11.1 GO:0004672 ... Q8TF76 19918057
    151089 3iq7:A (2.0) BS02 5ID 2.7.11.1 GO:0004672 ... Q8TF76 19918057
    151090 3iqa:A (2.2) BS01 DRW 3.5.2.6 GO:0005576 ... P9WKD3 20353175
    151091 3iqb:A (2.1) BS01 HEM ? GO:0020037 ... Q8RBX6 20017169
    151092 3iqb:A (2.1) BS02 OXY ? GO:0020037 ... Q8RBX6 20017169
    151093 3iqd:B (2.8) BS01 NAI 1.5.1.11 GO:0016491 ... Q9BHM6 20808820
    151094 3iqd:B (2.8) BS02 AG2 1.5.1.11 GO:0016491 ... Q9BHM6 20808820
    151095 3iqe:A (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151096 3iqe:A (1.8) BS02 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151097 3iqe:A (1.8) BS03 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151098 3iqe:B (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151099 3iqe:B (1.8) BS02 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151100 3iqe:B (1.8) BS03 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151101 3iqe:B (1.8) BS04 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151102 3iqe:C (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151103 3iqe:C (1.8) BS02 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151104 3iqe:C (1.8) BS03 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151105 3iqe:D (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151106 3iqe:D (1.8) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151107 3iqe:D (1.8) BS03 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151108 3iqe:D (1.8) BS04 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151109 3iqe:E (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151110 3iqe:E (1.8) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151111 3iqe:E (1.8) BS03 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151112 3iqe:F (1.8) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151113 3iqe:F (1.8) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151114 3iqe:F (1.8) BS03 F42 1.5.98.1 GO:0006730 ... P94951 19761261
    151115 3iqf:A (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151116 3iqf:A (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151117 3iqf:B (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151118 3iqf:B (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151119 3iqf:C (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151120 3iqf:C (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151121 3iqf:D (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151122 3iqf:D (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151123 3iqf:E (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151124 3iqf:E (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151125 3iqf:E (2.1) BS03 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151126 3iqf:F (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151127 3iqf:F (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151128 3iqf:G (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151129 3iqf:G (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151130 3iqf:H (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151131 3iqf:H (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151132 3iqf:I (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151133 3iqf:I (2.1) BS02 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151134 3iqf:I (2.1) BS03 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151135 3iqf:J (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151136 3iqf:J (2.1) BS02 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151137 3iqf:J (2.1) BS03 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151138 3iqf:K (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151139 3iqf:K (2.1) BS02 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151140 3iqf:K (2.1) BS03 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151141 3iqf:K (2.1) BS04 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151142 3iqf:K (2.1) BS05 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151143 3iqf:K (2.1) BS06 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151144 3iqf:L (2.1) BS01 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151145 3iqf:L (2.1) BS02 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151146 3iqf:L (2.1) BS03 E4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151147 3iqf:L (2.1) BS04 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151148 3iqg:X (1.9) BS01 peptide 2.5.1.47 GO:0003824 ... P45040 19928859
    151149 3iqh:X (1.9) BS01 peptide 2.5.1.47 GO:0003824 ... P45040 19928859
    151150 3iqi:X (1.7) BS01 peptide 2.5.1.47 GO:0003824 ... P45040 19928859
    151151 3iqj:A (1.15) BS01 peptide ? GO:0001836 ... P31947 20679480
    151152 3iqo:A (1.5) BS01 CA ? GO:0001726 ... P02638 20053360
    151153 3iqo:A (1.5) BS02 CA ? GO:0001726 ... P02638 20053360
    151154 3iqo:B (1.5) BS01 CA ? GO:0001726 ... P02638 20053360
    151155 3iqo:B (1.5) BS02 CA ? GO:0001726 ... P02638 20053360
    151156 3iqq:A (2.01) BS01 peptide ? GO:0001726 ... P02638 20053360
    151157 3iqq:A (2.01) BS02 CA ? GO:0001726 ... P02638 20053360
    151158 3iqq:A (2.01) BS03 CA ? GO:0001726 ... P02638 20053360
    151159 3iqs:A (2.3) BS01 ZN 3.5.4.38 GO:0008270 ... Q9HC16 18849968
    151160 3iqu:A (1.05) BS01 peptide ? GO:0001836 ... P31947 20679480
    151161 3iqv:A (1.2) BS01 peptide ? GO:0001836 ... P31947 20679480
    151162 3iqv:A (1.2) BS02 FSC ? GO:0001836 ... P31947 20679480 MOAD: Kd=6.6uM
    151163 3iqv:A (1.2) BS03 MG ? GO:0001836 ... P31947 20679480
    151164 3iqw:A (3.0) BS01 ANP ? GO:0005524 ... G0SFE0 19948960
    151165 3iqw:A (3.0) BS02 ZN ? GO:0005524 ... G0SFE0 19948960
    151166 3iqw:A (3.0) BS03 ANP ? GO:0005524 ... G0SFE0 19948960
    151167 3iqw:B (3.0) BS01 ANP ? GO:0005524 ... G0SFE0 19948960
    151168 3iqw:B (3.0) BS02 ZN ? GO:0005524 ... G0SFE0 19948960
    151169 3iqw:B (3.0) BS03 ANP ? GO:0005524 ... G0SFE0 19948960
    151170 3iqx:A (3.5) BS01 ADP ? GO:0005524 ... G0SFE0 19948960
    151171 3iqx:A (3.5) BS02 ZN ? GO:0005524 ... G0SFE0 19948960
    151172 3iqx:A (3.5) BS03 ADP ? GO:0005524 ... G0SFE0 19948960
    151173 3iqx:B (3.5) BS01 ADP ? GO:0005524 ... G0SFE0 19948960
    151174 3iqx:B (3.5) BS02 ADP ? GO:0005524 ... G0SFE0 19948960
    151175 3iqz:A (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151176 3iqz:A (2.1) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151177 3iqz:B (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151178 3iqz:B (2.1) BS02 CA 1.5.98.1 GO:0006730 ... P94951 19761261
    151179 3iqz:B (2.1) BS03 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151180 3iqz:C (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151181 3iqz:C (2.1) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151182 3iqz:D (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151183 3iqz:D (2.1) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151184 3iqz:E (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151185 3iqz:E (2.1) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151186 3iqz:F (2.1) BS01 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151187 3iqz:F (2.1) BS02 H4M 1.5.98.1 GO:0006730 ... P94951 19761261
    151188 3ir0:B (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151189 3ir0:D (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151190 3ir0:F (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151191 3ir0:H (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151192 3ir0:J (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151193 3ir0:L (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151194 3ir0:N (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151195 3ir0:P (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151196 3ir0:S (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151197 3ir0:U (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151198 3ir0:W (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151199 3ir0:Y (2.2) BS01 peptide ? GO:0005179 ... P01308 N/A
    151200 3ir1:A (2.15) BS01 MET ? GO:0016020 ... Q7BMQ8 19733245

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).