SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15001 1fyu:B (2.6) BS02 MN ? GO:0030246 ... P16404 11274466
    15002 1fyu:B (2.6) BS03 CA ? GO:0030246 ... P16404 11274466
    15003 1fyz:A (2.15) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15004 1fyz:A (2.15) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15005 1fyz:B (2.15) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15006 1fyz:B (2.15) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15007 1fz0:A (2.07) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15008 1fz0:A (2.07) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15009 1fz0:B (2.07) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15010 1fz0:B (2.07) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15011 1fz0:C (2.07) BS01 CA 1.14.13.25 GO:0005515 ... P18798 11456616
    15012 1fz1:A (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15013 1fz1:A (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15014 1fz1:B (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15015 1fz1:B (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15016 1fz1:C (1.96) BS01 CA 1.14.13.25 GO:0005515 ... P18798 11456616
    15017 1fz2:A (2.15) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15018 1fz2:A (2.15) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15019 1fz2:B (2.15) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15020 1fz2:B (2.15) BS02 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15021 1fz2:C (2.15) BS01 CA 1.14.13.25 GO:0005515 ... P18798 11456616
    15022 1fz3:A (2.03) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15023 1fz3:A (2.03) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15024 1fz3:B (2.03) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15025 1fz3:B (2.03) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15026 1fz4:A (2.38) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15027 1fz4:A (2.38) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15028 1fz4:B (2.38) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15029 1fz4:B (2.38) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456616
    15030 1fz5:A (2.4) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15031 1fz5:B (2.4) BS01 FE2 1.14.13.25 GO:0005515 ... P22869 11456616
    15032 1fz6:A (2.05) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15033 1fz6:A (2.05) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15034 1fz6:B (2.05) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15035 1fz6:B (2.05) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15036 1fz6:B (2.05) BS03 CA 1.14.13.25 GO:0005515 ... P22869 11456795
    15037 1fz7:A (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15038 1fz7:A (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15039 1fz7:B (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15040 1fz7:B (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11456795
    15041 1fz8:A (2.1) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15042 1fz8:A (2.1) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15043 1fz8:A (2.1) BS03 2BM 1.14.13.25 GO:0005515 ... P22869 11297413
    15044 1fz8:A (2.1) BS04 2BM 1.14.13.25 GO:0005515 ... P22869 11297413
    15045 1fz8:B (2.1) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15046 1fz8:B (2.1) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15047 1fz8:B (2.1) BS03 2BM 1.14.13.25 GO:0005515 ... P22869 11297413
    15048 1fz8:B (2.1) BS04 2BM 1.14.13.25 GO:0005515 ... P22869 11297413
    15049 1fz8:B (2.1) BS05 2BM 1.14.13.25 GO:0005515 ... P22869 11297413
    15050 1fz8:C (2.1) BS01 CA 1.14.13.25 GO:0005515 ... P18798 11297413
    15051 1fz8:C (2.1) BS02 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15052 1fz8:C (2.1) BS03 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15053 1fz8:C (2.1) BS04 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15054 1fz8:D (2.1) BS01 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15055 1fz8:D (2.1) BS02 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15056 1fz8:D (2.1) BS03 2BM 1.14.13.25 GO:0005515 ... P18798 11297413
    15057 1fz9:A (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15058 1fz9:A (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15059 1fz9:A (2.3) BS03 ETI 1.14.13.25 GO:0005515 ... P22869 11297413
    15060 1fz9:A (2.3) BS04 ETI 1.14.13.25 GO:0005515 ... P22869 11297413
    15061 1fz9:B (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15062 1fz9:B (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15063 1fz9:B (2.3) BS03 ETI 1.14.13.25 GO:0005515 ... P22869 11297413
    15064 1fz9:C (2.3) BS01 ETI 1.14.13.25 GO:0005515 ... P18798 11297413
    15065 1fz9:D (2.3) BS01 ETI 1.14.13.25 GO:0005515 ... P18798 11297413
    15066 1fz9:D (2.3) BS02 ETI 1.14.13.25 GO:0005515 ... P18798 11297413
    15067 1fza:C (2.9) BS01 CA ? GO:0005102 ... P02679 9333233
    15068 1fza:F (2.9) BS01 CA ? GO:0005102 ... P02679 9333233
    15069 1fzb:C (2.9) BS01 peptide ? GO:0005102 ... P02679 9333233
    15070 1fzb:C (2.9) BS02 CA ? GO:0005102 ... P02679 9333233
    15071 1fzb:F (2.9) BS01 peptide ? GO:0005102 ... P02679 9333233
    15072 1fzb:F (2.9) BS02 CA ? GO:0005102 ... P02679 9333233
    15073 1fzc:B (2.3) BS01 peptide ? GO:0005102 ... P02675 9628725
    15074 1fzc:B (2.3) BS02 CA ? GO:0005102 ... P02675 9628725
    15075 1fzc:C (2.3) BS01 peptide ? GO:0005102 ... P02679 9628725
    15076 1fzc:C (2.3) BS02 CA ? GO:0005102 ... P02679 9628725
    15077 1fzc:E (2.3) BS01 peptide ? GO:0005102 ... P02675 9628725
    15078 1fzc:E (2.3) BS02 CA ? GO:0005102 ... P02675 9628725
    15079 1fzc:F (2.3) BS01 peptide ? GO:0005102 ... P02679 9628725
    15080 1fzc:F (2.3) BS02 CA ? GO:0005102 ... P02679 9628725
    15081 1fzd:A (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15082 1fzd:B (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15083 1fzd:C (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15084 1fzd:D (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15085 1fzd:E (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15086 1fzd:F (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15087 1fzd:G (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15088 1fzd:H (2.1) BS01 CA ? GO:0007596 ... P02671 9689040
    15089 1fze:B (3.0) BS01 CA ? GO:0005102 ... P02675 10074346
    15090 1fze:B (3.0) BS02 CA ? GO:0005102 ... P02675 10074346
    15091 1fze:C (3.0) BS01 CA ? GO:0005102 ... P02679 10074346
    15092 1fze:E (3.0) BS01 CA ? GO:0005102 ... P02675 10074346
    15093 1fze:E (3.0) BS02 CA ? GO:0005102 ... P02675 10074346
    15094 1fze:F (3.0) BS01 CA ? GO:0005102 ... P02679 10074346
    15095 1fzf:B (2.7) BS01 peptide ? GO:0005102 ... P02675 10074346
    15096 1fzf:B (2.7) BS02 CA ? GO:0005102 ... P02675 10074346
    15097 1fzf:C (2.7) BS01 peptide ? GO:0005102 ... P02679 10074346
    15098 1fzf:C (2.7) BS02 CA ? GO:0005102 ... P02679 10074346
    15099 1fzf:C (2.7) BS03 CA ? GO:0005102 ... P02679 10074346
    15100 1fzf:E (2.7) BS01 peptide ? GO:0005102 ... P02675 10074346
    15101 1fzf:E (2.7) BS02 CA ? GO:0005102 ... P02675 10074346
    15102 1fzf:E (2.7) BS03 CA ? GO:0005102 ... P02675 10074346
    15103 1fzf:F (2.7) BS01 peptide ? GO:0005102 ... P02679 10074346
    15104 1fzf:F (2.7) BS02 CA ? GO:0005102 ... P02679 10074346
    15105 1fzg:B (2.5) BS01 peptide ? GO:0005102 ... P02675 10074346
    15106 1fzg:B (2.5) BS02 CA ? GO:0005102 ... P02675 10074346
    15107 1fzg:B (2.5) BS03 CA ? GO:0005102 ... P02675 10074346
    15108 1fzg:C (2.5) BS01 peptide ? GO:0005102 ... P02679 10074346
    15109 1fzg:C (2.5) BS02 CA ? GO:0005102 ... P02679 10074346
    15110 1fzg:C (2.5) BS03 CA ? GO:0005102 ... P02679 10074346
    15111 1fzg:E (2.5) BS01 peptide ? GO:0005102 ... P02675 10074346
    15112 1fzg:E (2.5) BS02 CA ? GO:0005102 ... P02675 10074346
    15113 1fzg:E (2.5) BS03 CA ? GO:0005102 ... P02675 10074346
    15114 1fzg:F (2.5) BS01 peptide ? GO:0005102 ... P02679 10074346
    15115 1fzg:F (2.5) BS02 CA ? GO:0005102 ... P02679 10074346
    15116 1fzg:F (2.5) BS03 CA ? GO:0005102 ... P02679 10074346
    15117 1fzh:A (2.6) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15118 1fzh:A (2.6) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15119 1fzh:A (2.6) BS03 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15120 1fzh:A (2.6) BS04 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15121 1fzh:B (2.6) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15122 1fzh:B (2.6) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15123 1fzh:B (2.6) BS03 CA 1.14.13.25 GO:0005515 ... P22869 11297413
    15124 1fzh:B (2.6) BS04 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15125 1fzh:B (2.6) BS05 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15126 1fzh:B (2.6) BS06 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15127 1fzi:A (3.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15128 1fzi:A (3.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15129 1fzi:A (3.3) BS03 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15130 1fzi:B (3.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15131 1fzi:B (3.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 11297413
    15132 1fzi:B (3.3) BS03 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15133 1fzi:B (3.3) BS04 XE 1.14.13.25 GO:0005515 ... P22869 11297413
    15134 1fzj:A (1.9) BS01 peptide ? N/A P01901 11290333
    15135 1fzj:A (1.9) BS02 FUL ? N/A P01901 11290333
    15136 1fzk:A (1.7) BS01 peptide ? N/A P01901 11290333
    15137 1fzk:A (1.7) BS02 FUL ? N/A P01901 11290333
    15138 1fzm:A (1.8) BS01 peptide ? N/A P01901 11290333
    15139 1fzo:A (1.8) BS01 peptide ? N/A P01901 11290333
    15140 1fzo:A (1.8) BS02 FUL ? N/A P01901 11290333
    15141 1fzq:A (1.7) BS01 GDP ? GO:0000139 ... Q9WUL7 11188688 MOAD: Kd=24nM
    15142 1fzu:A (1.8) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 11513591
    15143 1fzz:A (1.86) BS01 681 3.4.21.36 GO:0004252 ... P00772 11310599
    15144 1g02:A (1.86) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 11513591
    15145 1g05:A (2.45) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 11327577
    15146 1g05:A (2.45) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 11327577
    15147 1g05:A (2.45) BS03 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15148 1g05:A (2.45) BS04 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15149 1g05:A (2.45) BS05 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15150 1g05:B (2.45) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 11327577
    15151 1g05:B (2.45) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 11327577
    15152 1g05:B (2.45) BS03 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15153 1g05:B (2.45) BS04 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15154 1g05:B (2.45) BS05 CA 3.4.24.17 GO:0004222 ... P08254 11327577
    15155 1g05:B (2.45) BS06 BBH 3.4.24.17 GO:0004222 ... P08254 11327577 MOAD: ic50=3.1nM
    BindingDB: IC50=3.1nM
    15156 1g08:A (1.9) BS01 HEM ? GO:0005344 ... P01966 11112521
    15157 1g08:B (1.9) BS01 HEM ? GO:0005344 ... P02070 11112521
    15158 1g08:C (1.9) BS01 HEM ? GO:0005344 ... P01966 11112521
    15159 1g08:D (1.9) BS01 HEM ? GO:0005344 ... P02070 11112521
    15160 1g09:A (2.04) BS01 HEM ? GO:0005344 ... P01966 11112521
    15161 1g09:B (2.04) BS01 HEM ? GO:0005344 ... P02070 11112521
    15162 1g09:C (2.04) BS01 HEM ? GO:0005344 ... P01966 11112521
    15163 1g09:D (2.04) BS01 HEM ? GO:0005344 ... P02070 11112521
    15164 1g0a:A (2.04) BS01 HEM ? GO:0005344 ... P01966 11112521
    15165 1g0a:B (2.04) BS01 HEM ? GO:0005344 ... P02070 11112521
    15166 1g0a:C (2.04) BS01 HEM ? GO:0005344 ... P01966 11112521
    15167 1g0a:D (2.04) BS01 HEM ? GO:0005344 ... P02070 11112521
    15168 1g0b:A (1.9) BS01 HEM ? GO:0005344 ... P01958 11112521
    15169 1g0b:B (1.9) BS01 HEM ? GO:0005344 ... P02062 11112521
    15170 1g0c:A (1.9) BS01 BGC 3.2.1.4 GO:0000272 ... P19424 11501997
    15171 1g0c:A (1.9) BS02 BGC 3.2.1.4 GO:0000272 ... P19424 11501997
    15172 1g0d:A (2.5) BS01 SO4 2.3.1.-
    2.3.2.13
    3.4.-.-
    3.5.1.44
    GO:0000785 ... P52181 11080504
    15173 1g0e:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 11327835
    15174 1g0e:A (1.6) BS02 4MZ 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 11327835
    15175 1g0f:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 11327835
    15176 1g0h:A (2.3) BS01 CA 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15177 1g0h:A (2.3) BS02 CA 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15178 1g0h:A (2.3) BS03 IPD 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15179 1g0h:B (2.3) BS01 CA 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15180 1g0h:B (2.3) BS02 CA 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15181 1g0h:B (2.3) BS03 IPD 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15182 1g0i:A (2.4) BS01 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15183 1g0i:A (2.4) BS02 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15184 1g0i:A (2.4) BS03 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15185 1g0i:A (2.4) BS04 PO4 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15186 1g0i:A (2.4) BS05 INS 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15187 1g0i:B (2.4) BS01 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15188 1g0i:B (2.4) BS02 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15189 1g0i:B (2.4) BS03 MN 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15190 1g0i:B (2.4) BS04 PO4 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15191 1g0i:B (2.4) BS05 INS 3.1.3.11
    3.1.3.25
    GO:0006020 ... Q57573 11170378
    15192 1g0n:A (2.0) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15193 1g0n:A (2.0) BS02 PHH 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=25nM
    15194 1g0n:B (2.0) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15195 1g0o:A (1.7) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15196 1g0o:A (1.7) BS02 PYQ 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=14nM
    15197 1g0o:B (1.7) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15198 1g0o:B (1.7) BS02 PYQ 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=14nM
    15199 1g0o:C (1.7) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15200 1g0o:C (1.7) BS02 PYQ 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=14nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).