SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16601 1gkp:C (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16602 1gkp:D (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16603 1gkp:D (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16604 1gkp:E (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16605 1gkp:E (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16606 1gkp:F (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16607 1gkp:F (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16608 1gkq:A (2.6) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16609 1gkq:A (2.6) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16610 1gkq:B (2.6) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16611 1gkq:B (2.6) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16612 1gkq:C (2.6) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16613 1gkq:C (2.6) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16614 1gkq:D (2.6) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16615 1gkq:D (2.6) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16616 1gkr:A (2.6) BS01 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16617 1gkr:A (2.6) BS02 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16618 1gkr:B (2.6) BS01 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16619 1gkr:B (2.6) BS02 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16620 1gkr:C (2.6) BS01 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16621 1gkr:C (2.6) BS02 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16622 1gkr:D (2.6) BS01 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16623 1gkr:D (2.6) BS02 ZN 3.5.2.- GO:0000256 ... P81006 12093275
    16624 1gks:A (-1.00) BS01 HEM ? GO:0005506 ... P00122 8969306
    16625 1gkt:A (2.1) BS01 peptide 3.4.23.22 N/A P11838 11683623
    16626 1gky:A (2.0) BS01 SO4 2.7.4.8 GO:0004385 ... P15454 1314905
    16627 1gky:A (2.0) BS02 5GP 2.7.4.8 GO:0004385 ... P15454 1314905
    16628 1gkz:A (2.2) BS01 K 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 11562470
    16629 1gkz:A (2.2) BS02 ADP 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 11562470
    16630 1gl3:A (2.6) BS01 CYS 1.2.1.11 GO:0004073 ... P0A9Q9 11724560
    16631 1gl3:A (2.6) BS02 NDP 1.2.1.11 GO:0004073 ... P0A9Q9 11724560
    16632 1gl3:B (2.6) BS01 NDP 1.2.1.11 GO:0004073 ... P0A9Q9 11724560
    16633 1gl4:A (2.0) BS01 ZN ? N/A P10493 11574465
    16634 1gl6:A (2.8) BS01 GNP ? N/A Q04230 11214325
    16635 1gl6:A (2.8) BS02 GNP ? N/A Q04230 11214325
    16636 1gl6:B (2.8) BS01 GNP ? N/A Q04230 11214325
    16637 1gl6:D (2.8) BS01 GNP ? N/A Q04230 11214325
    16638 1gl6:E (2.8) BS01 GNP ? N/A Q04230 11214325
    16639 1gl6:F (2.8) BS01 GNP ? N/A Q04230 11214325
    16640 1gl6:G (2.8) BS01 GNP ? N/A Q04230 11214325
    16641 1gl7:A (3.0) BS01 ANP ? N/A Q04230 11214325
    16642 1gl7:B (3.0) BS01 ANP ? N/A Q04230 11214325
    16643 1gl7:D (3.0) BS01 ANP ? N/A Q04230 11214325
    16644 1gl7:E (3.0) BS01 ANP ? N/A Q04230 11214325
    16645 1gl7:E (3.0) BS02 ANP ? N/A Q04230 11214325
    16646 1gl7:F (3.0) BS01 ANP ? N/A Q04230 11214325
    16647 1gl7:G (3.0) BS01 ANP ? N/A Q04230 11214325
    16648 1gl9:B (3.2) BS01 ANP 5.6.2.- GO:0003676 ... O29238 11823434
    16649 1gl9:C (3.2) BS01 ANP 5.6.2.- GO:0003676 ... O29238 11823434
    16650 1gla:G (2.6) BS01 GOL 2.7.1.30 GO:0004370 ... P0A6F3 8430315
    16651 1glb:G (2.6) BS01 ADP 2.7.1.30 GO:0004370 ... P0A6F3 8430315
    16652 1glb:G (2.6) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 8430315
    16653 1glc:F (2.65) BS01 ZN 2.7.1.69 GO:0005515 ... P69783 8170944
    16654 1glc:G (2.65) BS01 G3H 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16655 1glc:G (2.65) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16656 1gld:G (2.93) BS01 MN 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16657 1gld:G (2.93) BS02 G3H 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16658 1gld:G (2.93) BS03 ADP 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16659 1gle:F (2.94) BS01 ZN 2.7.1.69 GO:0005515 ... P69783 8170944
    16660 1gle:G (2.94) BS01 G3H 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16661 1gle:G (2.94) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 8170944
    16662 1glf:O (2.62) BS01 PO4 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16663 1glf:O (2.62) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16664 1glf:O (2.62) BS03 GOL 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16665 1glf:X (2.62) BS01 PO4 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16666 1glf:X (2.62) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16667 1glf:X (2.62) BS03 GOL 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16668 1glf:Y (2.62) BS01 PO4 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16669 1glf:Y (2.62) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16670 1glf:Y (2.62) BS03 GOL 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16671 1glf:Z (2.62) BS01 PO4 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16672 1glf:Z (2.62) BS02 ADP 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16673 1glf:Z (2.62) BS03 GOL 2.7.1.30 GO:0004370 ... P0A6F3 9817843
    16674 1glg:A (2.0) BS01 GAL ? GO:0005509 ... P0AEE5 8161535
    16675 1glg:A (2.0) BS02 CA ? GO:0005509 ... P0AEE5 8161535
    16676 1glh:A (2.0) BS01 NA 3.2.1.73 GO:0004553 ... P23904 8200344
    16677 1gli:A (2.5) BS01 HEM ? GO:0004601 ... P69905 8647854
    16678 1gli:B (2.5) BS01 HEM ? GO:0004601 ... P68871 8647854
    16679 1gli:C (2.5) BS01 HEM ? GO:0004601 ... P69905 8647854
    16680 1gli:D (2.5) BS01 HEM ? GO:0004601 ... P68871 8647854
    16681 1glj:O (3.0) BS01 ATS 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16682 1glj:O (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16683 1glj:Y (3.0) BS01 ATS 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16684 1glj:Y (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16685 1gll:O (3.0) BS01 ACP 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16686 1gll:O (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16687 1gll:Y (3.0) BS01 ACP 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16688 1gll:Y (3.0) BS02 GOL 2.7.1.30 GO:0004370 ... P0A6F3 10090737
    16689 1glm:A (2.4) BS01 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16690 1glm:A (2.4) BS02 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16691 1glm:A (2.4) BS03 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16692 1glm:A (2.4) BS04 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16693 1glm:A (2.4) BS05 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16694 1glm:A (2.4) BS06 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16695 1glm:A (2.4) BS07 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16696 1glm:A (2.4) BS08 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16697 1glm:A (2.4) BS09 MAN 3.2.1.3 GO:0004339 ... P69327 8176747
    16698 1glp:A (1.9) BS01 GTS 2.5.1.18 GO:0000122 ... P19157 8145243
    16699 1glp:B (1.9) BS01 GTS 2.5.1.18 GO:0000122 ... P19157 8145243
    16700 1glq:A (1.8) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 8145243
    16701 1glq:B (1.8) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 8145243
    16702 1glu:A (2.9) BS01 dna ? GO:0003700 ... P06536 1865905
    16703 1glu:A (2.9) BS02 dna ? GO:0003700 ... P06536 1865905
    16704 1glu:A (2.9) BS03 ZN ? GO:0003700 ... P06536 1865905
    16705 1glu:A (2.9) BS04 ZN ? GO:0003700 ... P06536 1865905
    16706 1glu:B (2.9) BS01 dna ? GO:0003700 ... P06536 1865905
    16707 1glu:B (2.9) BS02 dna ? GO:0003700 ... P06536 1865905
    16708 1glu:B (2.9) BS03 ZN ? GO:0003700 ... P06536 1865905
    16709 1glu:B (2.9) BS04 ZN ? GO:0003700 ... P06536 1865905
    16710 1gm4:A (2.05) BS01 HEC ? GO:0009055 ... Q9L915 11551953
    16711 1gm4:A (2.05) BS02 HEC ? GO:0009055 ... Q9L915 11551953
    16712 1gm4:A (2.05) BS03 HEC ? GO:0009055 ... Q9L915 11551953
    16713 1gm4:A (2.05) BS04 HEC ? GO:0009055 ... Q9L915 11551953
    16714 1gm4:A (2.05) BS05 SO4 ? GO:0009055 ... Q9L915 11551953
    16715 1gm5:A (3.24) BS01 dna 3.6.4.12 GO:0003676 ... Q9WY48 11595187
    16716 1gm5:A (3.24) BS02 dna 3.6.4.12 GO:0003676 ... Q9WY48 11595187
    16717 1gm5:A (3.24) BS03 dna 3.6.4.12 GO:0003676 ... Q9WY48 11595187
    16718 1gm5:A (3.24) BS04 ADP 3.6.4.12 GO:0003676 ... Q9WY48 11595187
    16719 1gm6:A (2.13) BS01 GOL ? GO:0005549 ... P81608 12027882
    16720 1gm7:B (1.45) BS01 CA 3.5.1.11 GO:0016787 ... P06875 11601852
    16721 1gm7:B (1.45) BS02 PNN 3.5.1.11 GO:0016787 ... P06875 11601852
    16722 1gm8:B (2.0) BS01 CA 3.5.1.11 GO:0016787 ... P06875 11601852
    16723 1gm8:B (2.0) BS02 SOX 3.5.1.11 GO:0016787 ... P06875 11601852
    16724 1gm9:A (1.8) BS01 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16725 1gm9:A (1.8) BS02 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16726 1gm9:A (1.8) BS03 SOX 3.5.1.11 GO:0016787 ... P06875 11601852
    16727 1gm9:B (1.8) BS01 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16728 1gm9:B (1.8) BS02 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16729 1gm9:B (1.8) BS03 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16730 1gm9:B (1.8) BS04 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16731 1gm9:B (1.8) BS05 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16732 1gm9:B (1.8) BS06 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16733 1gm9:B (1.8) BS07 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16734 1gm9:B (1.8) BS08 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16735 1gm9:B (1.8) BS09 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16736 1gm9:B (1.8) BS10 CA 3.5.1.11 GO:0016787 ... P06875 11601852
    16737 1gm9:B (1.8) BS11 SOX 3.5.1.11 GO:0016787 ... P06875 11601852
    16738 1gmb:A (2.0) BS01 HEC ? GO:0009055 ... Q9L915 11551953
    16739 1gmb:A (2.0) BS02 HEC ? GO:0009055 ... Q9L915 11551953
    16740 1gmb:A (2.0) BS03 HEC ? GO:0009055 ... Q9L915 11551953
    16741 1gmb:A (2.0) BS04 HEC ? GO:0009055 ... Q9L915 11551953
    16742 1gmb:A (2.0) BS05 SO4 ? GO:0009055 ... Q9L915 11551953
    16743 1gmc:F (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16744 1gmc:G (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16745 1gmc:G (2.2) BS02 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16746 1gmd:F (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16747 1gmd:F (2.2) BS02 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16748 1gmd:F (2.2) BS03 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16749 1gmd:F (2.2) BS04 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16750 1gmd:F (2.2) BS05 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16751 1gmd:F (2.2) BS06 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16752 1gmd:F (2.2) BS07 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16753 1gmd:G (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16754 1gmd:G (2.2) BS02 peptide 3.4.21.1 GO:0004252 ... P00766 8003497
    16755 1gmd:G (2.2) BS03 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16756 1gmd:G (2.2) BS04 HEX 3.4.21.1 GO:0004252 ... P00766 8003497
    16757 1gmh:F (2.1) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 1942036
    16758 1gmh:G (2.1) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 1942036
    16759 1gmh:G (2.1) BS02 ISP 3.4.21.1 GO:0004252 ... P00766 1942036
    16760 1gmm:A (2.0) BS01 CA 3.2.1.8 GO:0030246 ... O52780 11673472
    16761 1gmn:A (2.3) BS01 SGN ? N/A P14210 11597998
    16762 1gmn:A (2.3) BS02 IDS ? N/A P14210 11597998
    16763 1gmn:A (2.3) BS03 SGN ? N/A P14210 11597998
    16764 1gmn:A (2.3) BS04 IDS ? N/A P14210 11597998
    16765 1gmn:B (2.3) BS01 IDS ? N/A P14210 11597998
    16766 1gmo:A (3.0) BS01 SO4 ? N/A P14210 11597998
    16767 1gmo:B (3.0) BS01 IDS ? N/A P14210 11597998
    16768 1gmo:B (3.0) BS02 SGN ? N/A P14210 11597998
    16769 1gmo:B (3.0) BS03 SGN ? N/A P14210 11597998
    16770 1gmo:B (3.0) BS04 SGN ? N/A P14210 11597998
    16771 1gmo:B (3.0) BS05 IDS ? N/A P14210 11597998
    16772 1gmo:B (3.0) BS06 SO4 ? N/A P14210 11597998
    16773 1gmo:C (3.0) BS01 SGN ? N/A P14210 11597998
    16774 1gmo:C (3.0) BS02 IDS ? N/A P14210 11597998
    16775 1gmo:C (3.0) BS03 SO4 ? N/A P14210 11597998
    16776 1gmo:D (3.0) BS01 SO4 ? N/A P14210 11597998
    16777 1gmo:E (3.0) BS01 SO4 ? N/A P14210 11597998
    16778 1gmo:F (3.0) BS01 SGN ? N/A P14210 11597998
    16779 1gmo:F (3.0) BS02 SGN ? N/A P14210 11597998
    16780 1gmo:F (3.0) BS03 SGN ? N/A P14210 11597998
    16781 1gmo:F (3.0) BS04 SO4 ? N/A P14210 11597998
    16782 1gmo:F (3.0) BS05 SO4 ? N/A P14210 11597998
    16783 1gmo:G (3.0) BS01 SGN ? N/A P14210 11597998
    16784 1gmo:H (3.0) BS01 SGN ? N/A P14210 11597998
    16785 1gmo:H (3.0) BS02 SGN ? N/A P14210 11597998
    16786 1gmo:H (3.0) BS03 SO4 ? N/A P14210 11597998
    16787 1gmp:A (1.7) BS01 2GP 4.6.1.24 GO:0003723 ... P05798 15299531
    16788 1gmp:B (1.7) BS01 2GP 4.6.1.24 GO:0003723 ... P05798 15299531
    16789 1gmr:A (1.77) BS01 2GP 4.6.1.24 GO:0003723 ... P05798 15299531
    16790 1gmr:B (1.77) BS01 2GP 4.6.1.24 GO:0003723 ... P05798 15299531
    16791 1gmw:A (1.5) BS01 CU ? GO:0005737 ... P18317 11591723
    16792 1gmw:B (1.5) BS01 CU ? GO:0005737 ... P18317 11591723
    16793 1gmw:C (1.5) BS01 CU ? GO:0005737 ... P18317 11591723
    16794 1gmw:D (1.5) BS01 CU ? GO:0005737 ... P18317 11591723
    16795 1gmy:A (1.9) BS01 AEM 3.4.22.1 GO:0006508 ... P07858 11741472
    16796 1gmy:A (1.9) BS02 APD 3.4.22.1 GO:0006508 ... P07858 11741472
    16797 1gmy:A (1.9) BS03 DFA 3.4.22.1 GO:0006508 ... P07858 11741472
    16798 1gmy:A (1.9) BS04 DFA 3.4.22.1 GO:0006508 ... P07858 11741472
    16799 1gmy:B (1.9) BS01 DFA 3.4.22.1 GO:0006508 ... P07858 11741472
    16800 1gmy:B (1.9) BS02 AEM 3.4.22.1 GO:0006508 ... P07858 11741472

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).