SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    170601 3nz2:D (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170602 3nz2:E (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170603 3nz2:E (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170604 3nz2:F (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170605 3nz2:F (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170606 3nz2:G (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170607 3nz2:G (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170608 3nz2:H (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170609 3nz2:H (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170610 3nz2:I (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170611 3nz2:I (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170612 3nz2:J (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170613 3nz2:J (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170614 3nz2:K (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170615 3nz2:K (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170616 3nz2:L (2.35) BS01 ACO ? GO:0008374 ... Q9KLB0 N/A
    170617 3nz2:L (2.35) BS02 ACO ? GO:0008374 ... Q9KLB0 N/A
    170618 3nz6:X (2.0) BS01 D2J 1.5.1.3 GO:0003729 ... P16184 21206056 MOAD: ic50=1.3nM
    BindingDB: IC50=1.3nM
    170619 3nz6:X (2.0) BS02 NDP 1.5.1.3 GO:0003729 ... P16184 21206056
    170620 3nz9:X (1.8) BS01 NDP 1.5.1.3 GO:0003729 ... P16184 21206056
    170621 3nz9:X (1.8) BS02 D2K 1.5.1.3 GO:0003729 ... P16184 21206056 MOAD: ic50=6.5nM
    BindingDB: IC50=6.5nM
    170622 3nza:X (1.9) BS01 NDP 1.5.1.3 GO:0003729 ... P16184 21206056
    170623 3nza:X (1.9) BS02 D2K 1.5.1.3 GO:0003729 ... P16184 21206056 BindingDB: IC50=6.5nM
    170624 3nzb:X (1.45) BS01 D2N 1.5.1.3 GO:0003729 ... P16184 21206056 MOAD: ic50=35nM
    BindingDB: IC50=35nM
    170625 3nzb:X (1.45) BS02 NDP 1.5.1.3 GO:0003729 ... P16184 21206056
    170626 3nzb:X (1.45) BS03 D2N 1.5.1.3 GO:0003729 ... P16184 21206056 MOAD: ic50=35nM
    BindingDB: IC50=35nM
    170627 3nzc:X (2.0) BS01 D2O 1.5.1.3 GO:0003729 ... P16184 21206056
    170628 3nzd:A (1.8) BS01 D2Q 1.5.1.3 GO:0000900 ... P00374 21206056
    170629 3nzd:A (1.8) BS02 NDP 1.5.1.3 GO:0000900 ... P00374 21206056
    170630 3nzg:A (2.0) BS01 MG N/A N/A N/A N/A
    170631 3nzg:B (2.0) BS01 MG N/A N/A N/A N/A
    170632 3nzg:C (2.0) BS01 MG N/A N/A N/A N/A
    170633 3nzg:D (2.0) BS01 MG N/A N/A N/A N/A
    170634 3nzh:H (2.0) BS01 CO N/A N/A N/A N/A
    170635 3nzi:A (2.75) BS01 peptide 3.4.21.- GO:0004252 ... Q92743 21297635
    170636 3nzj:K (2.4) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170637 3nzj:K (2.4) BS02 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170638 3nzj:L (2.4) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170639 3nzj:Y (2.4) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170640 3nzj:Z (2.4) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170641 3nzk:A (1.8) BS01 C90 3.5.1.108 GO:0009245 ... A1JJJ9 21171638 MOAD: Ki=0.54nM
    170642 3nzk:A (1.8) BS02 ZN 3.5.1.108 GO:0009245 ... A1JJJ9 21171638
    170643 3nzk:B (1.8) BS01 C90 3.5.1.108 GO:0009245 ... A1JJJ9 21171638 MOAD: Ki=0.54nM
    170644 3nzk:B (1.8) BS02 ZN 3.5.1.108 GO:0009245 ... A1JJJ9 21171638
    170645 3nzp:A (3.0) BS01 PLP 4.1.1.19 GO:0003824 ... Q0PAC6 21139196
    170646 3nzp:B (3.0) BS01 PLP 4.1.1.19 GO:0003824 ... Q0PAC6 21139196
    170647 3nzp:B (3.0) BS02 SO4 4.1.1.19 GO:0003824 ... Q0PAC6 21139196
    170648 3nzq:A (3.1) BS01 SO4 4.1.1.19 GO:0000287 ... P21170 21139196
    170649 3nzq:B (3.1) BS01 SO4 4.1.1.19 GO:0000287 ... P21170 21139196
    170650 3nzq:B (3.1) BS02 SO4 4.1.1.19 GO:0000287 ... P21170 21139196
    170651 3nzs:A (2.75) BS01 NZS 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 20822905
    170652 3nzt:A (2.0) BS01 AMP 6.3.2.2 GO:0003824 ... Q5NHS8 N/A
    170653 3nzu:A (2.6) BS01 NZU 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 20822905
    170654 3nzw:K (2.5) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170655 3nzw:K (2.5) BS02 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170656 3nzw:L (2.5) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170657 3nzw:Y (2.5) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170658 3nzw:Z (2.5) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170659 3nzx:K (2.7) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170660 3nzx:K (2.7) BS02 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170661 3nzx:L (2.7) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170662 3nzx:Y (2.7) BS01 peptide 3.4.25.1 GO:0004175 ... P30656 20715286
    170663 3nzx:Z (2.7) BS01 peptide 3.4.25.1 GO:0003674 ... P23724 20715286
    170664 3o01:A (1.9) BS01 DXC ? N/A Q56026 21031487
    170665 3o01:B (1.9) BS01 DXC ? N/A Q56026 21031487
    170666 3o02:A (1.9) BS01 JN3 ? N/A Q56026 21031487
    170667 3o02:B (1.9) BS01 JN3 ? N/A Q56026 21031487
    170668 3o03:A (1.9) BS01 CA N/A N/A N/A 19177572
    170669 3o03:A (1.9) BS02 NAP N/A N/A N/A 19177572
    170670 3o03:A (1.9) BS03 GCO N/A N/A N/A 19177572
    170671 3o05:A (2.2) BS01 PLP 4.3.3.6 GO:0005515 ... Q03148 20919991
    170672 3o05:B (2.2) BS01 PLP 4.3.3.6 GO:0005515 ... Q03148 20919991
    170673 3o05:C (2.2) BS01 PLP 4.3.3.6 GO:0005515 ... Q03148 20919991
    170674 3o0e:A (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170675 3o0e:B (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170676 3o0e:C (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170677 3o0e:D (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170678 3o0e:E (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170679 3o0e:F (3.01) BS01 peptide ? GO:0001530 ... P02931 21098297
    170680 3o0f:A (1.94) BS01 AMP ? GO:0003824 ... A1A2L3 21538547
    170681 3o0f:A (1.94) BS02 ZN ? GO:0003824 ... A1A2L3 21538547
    170682 3o0f:A (1.94) BS03 FE ? GO:0003824 ... A1A2L3 21538547
    170683 3o0f:A (1.94) BS04 FE ? GO:0003824 ... A1A2L3 21538547
    170684 3o0f:A (1.94) BS05 PO4 ? GO:0003824 ... A1A2L3 21538547
    170685 3o0g:B (1.95) BS01 3O0 2.7.11.1 GO:0000226 ... Q00535 16039528 MOAD: Ki=0.6uM
    170686 3o0h:A (1.9) BS01 FAD 1.8.1.7 GO:0004362 ... A0A0H3LWY9 N/A
    170687 3o0h:B (1.9) BS01 FAD 1.8.1.7 GO:0004362 ... A0A0H3LWY9 N/A
    170688 3o0i:A (1.47) BS01 P54 3.6.4.10 GO:0005524 ... P07900 23995768 BindingDB: IC50=>250000nM
    170689 3o0j:A (1.95) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 22841723
    170690 3o0j:A (1.95) BS02 3OJ 3.1.4.53 GO:0004114 ... Q07343 22841723 BindingDB: IC50=240nM
    170691 3o0m:A (1.9) BS01 ZN ? GO:0003824 ... A0R291 25613812
    170692 3o0m:A (1.9) BS02 AMP ? GO:0003824 ... A0R291 25613812
    170693 3o0m:B (1.9) BS01 ZN ? GO:0003824 ... A0R291 25613812
    170694 3o0m:B (1.9) BS02 AMP ? GO:0003824 ... A0R291 25613812
    170695 3o0n:A (1.95) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170696 3o0n:B (1.95) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170697 3o0n:B (1.95) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170698 3o0n:B (1.95) BS03 B12 1.17.4.1 GO:0000166 ... O33839 20672854
    170699 3o0o:A (1.9) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170700 3o0o:A (1.9) BS02 GDP 1.17.4.1 GO:0000166 ... O33839 20672854
    170701 3o0o:A (1.9) BS03 B12 1.17.4.1 GO:0000166 ... O33839 20672854
    170702 3o0o:A (1.9) BS04 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170703 3o0o:B (1.9) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170704 3o0o:B (1.9) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170705 3o0o:B (1.9) BS03 GDP 1.17.4.1 GO:0000166 ... O33839 20672854
    170706 3o0o:B (1.9) BS04 B12 1.17.4.1 GO:0000166 ... O33839 20672854
    170707 3o0q:A (1.8) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170708 3o0q:A (1.8) BS02 GDP 1.17.4.1 GO:0000166 ... O33839 20672854
    170709 3o0q:A (1.8) BS03 ADN 1.17.4.1 GO:0000166 ... O33839 20672854
    170710 3o0q:A (1.8) BS04 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170711 3o0q:B (1.8) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170712 3o0q:B (1.8) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 20672854
    170713 3o0q:B (1.8) BS03 GDP 1.17.4.1 GO:0000166 ... O33839 20672854
    170714 3o0q:B (1.8) BS04 ADN 1.17.4.1 GO:0000166 ... O33839 20672854
    170715 3o0r:B (2.7) BS01 HEM 1.7.2.5 GO:0004129 ... Q59647 21109633
    170716 3o0r:B (2.7) BS02 HEM 1.7.2.5 GO:0004129 ... Q59647 21109633
    170717 3o0r:B (2.7) BS03 FE 1.7.2.5 GO:0004129 ... Q59647 21109633
    170718 3o0r:B (2.7) BS04 O 1.7.2.5 GO:0004129 ... Q59647 21109633
    170719 3o0r:C (2.7) BS01 HEM 1.7.99.7 GO:0005886 ... Q59646 21109633
    170720 3o0r:C (2.7) BS02 CA 1.7.99.7 GO:0005886 ... Q59646 21109633
    170721 3o0r:C (2.7) BS03 HEC 1.7.99.7 GO:0005886 ... Q59646 21109633
    170722 3o0u:A (1.8) BS01 O47 3.4.22.38 GO:0006508 ... P43235 20843687
    170723 3o0v:A (2.3) BS01 CA ? GO:0005509 ... P14211 20880849
    170724 3o0w:A (1.95) BS01 MAN ? GO:0005509 ... P14211 20880849
    170725 3o0w:A (1.95) BS02 MAN ? GO:0005509 ... P14211 20880849
    170726 3o0w:A (1.95) BS03 GLC ? GO:0005509 ... P14211 20880849
    170727 3o0w:A (1.95) BS04 CA ? GO:0005509 ... P14211 20880849
    170728 3o0x:A (2.01) BS01 MAN ? GO:0005509 ... P14211 20880849
    170729 3o0x:A (2.01) BS02 MAN ? GO:0005509 ... P14211 20880849
    170730 3o0x:A (2.01) BS03 GLC ? GO:0005509 ... P14211 20880849
    170731 3o0x:A (2.01) BS04 CA ? GO:0005509 ... P14211 20880849
    170732 3o0x:B (2.01) BS01 MAN ? GO:0005509 ... P14211 20880849
    170733 3o0x:B (2.01) BS02 MAN ? GO:0005509 ... P14211 20880849
    170734 3o0x:B (2.01) BS03 GLC ? GO:0005509 ... P14211 20880849
    170735 3o0x:B (2.01) BS04 CA ? GO:0005509 ... P14211 20880849
    170736 3o14:A (1.7) BS01 ZN ? N/A A1TY68 N/A
    170737 3o14:A (1.7) BS02 NIO ? N/A A1TY68 N/A
    170738 3o14:B (1.7) BS01 ZN ? N/A A1TY68 N/A
    170739 3o15:A (1.95) BS01 3NM 2.5.1.3 GO:0000287 ... P39594 N/A
    170740 3o15:A (1.95) BS02 IFP 2.5.1.3 GO:0000287 ... P39594 N/A
    170741 3o15:A (1.95) BS03 POP 2.5.1.3 GO:0000287 ... P39594 N/A
    170742 3o17:A (3.0) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 N/A
    170743 3o17:B (3.0) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 N/A
    170744 3o1a:A (2.5) BS01 HEM 1.14.14.1 GO:0004497 ... Q6ZZI7 20974107
    170745 3o1c:A (1.08) BS01 ADN 3.4.22.-
    3.9.1.-
    GO:0000118 ... P80912 20940308
    170746 3o1d:A (2.4007) BS01 peptide ? GO:0003677 ... Q9PTN2 22180837
    170747 3o1d:A (2.4007) BS02 G72 ? GO:0003677 ... Q9PTN2 22180837
    170748 3o1e:A (2.5001) BS01 peptide ? GO:0003677 ... Q9PTN2 22180837
    170749 3o1e:A (2.5001) BS02 H97 ? GO:0003677 ... Q9PTN2 22180837
    170750 3o1g:A (1.65) BS01 O75 3.4.22.38 GO:0006508 ... P43235 20843687 BindingDB: IC50=<1nM
    170751 3o1h:B (3.1) BS01 TMO ? GO:0005515 ... Q87ID2 22483119
    170752 3o1m:A (1.75) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170753 3o1m:A (1.75) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170754 3o1m:A (1.75) BS03 MN 1.14.11.33 GO:0005515 ... P05050 21068844
    170755 3o1m:A (1.75) BS04 AKG 1.14.11.33 GO:0005515 ... P05050 21068844
    170756 3o1o:A (1.92) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170757 3o1o:A (1.92) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170758 3o1o:A (1.92) BS03 AKG 1.14.11.33 GO:0005515 ... P05050 21068844
    170759 3o1o:A (1.92) BS04 MN 1.14.11.33 GO:0005515 ... P05050 21068844
    170760 3o1p:A (1.51) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170761 3o1p:A (1.51) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170762 3o1p:A (1.51) BS03 MN 1.14.11.33 GO:0005515 ... P05050 21068844
    170763 3o1p:A (1.51) BS04 AKG 1.14.11.33 GO:0005515 ... P05050 21068844
    170764 3o1r:A (1.77) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170765 3o1r:A (1.77) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170766 3o1r:A (1.77) BS03 MN 1.14.11.33 GO:0005515 ... P05050 21068844
    170767 3o1r:A (1.77) BS04 AKG 1.14.11.33 GO:0005515 ... P05050 21068844
    170768 3o1s:A (1.58) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170769 3o1s:A (1.58) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170770 3o1s:A (1.58) BS03 FE 1.14.11.33 GO:0005515 ... P05050 21068844
    170771 3o1t:A (1.48) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170772 3o1t:A (1.48) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170773 3o1t:A (1.48) BS03 FE 1.14.11.33 GO:0005515 ... P05050 21068844
    170774 3o1u:A (1.54) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170775 3o1u:A (1.54) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170776 3o1u:A (1.54) BS03 FE 1.14.11.33 GO:0005515 ... P05050 21068844
    170777 3o1v:A (1.9) BS01 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170778 3o1v:A (1.9) BS02 dna 1.14.11.33 GO:0005515 ... P05050 21068844
    170779 3o1v:A (1.9) BS03 FE 1.14.11.33 GO:0005515 ... P05050 21068844
    170780 3o1x:A (1.08) BS01 ADN 3.4.22.-
    3.9.1.-
    GO:0000118 ... P80912 20940308
    170781 3o1y:A (1.75) BS01 HEC ? GO:0005515 ... P00004 24662464
    170782 3o1y:B (1.75) BS01 HEC ? GO:0005515 ... P00004 24662464
    170783 3o1y:C (1.75) BS01 HEC ? GO:0005515 ... P00004 24662464
    170784 3o20:A (1.9) BS01 HEC ? GO:0005515 ... P00004 24662464
    170785 3o20:B (1.9) BS01 HEC ? GO:0005515 ... P00004 24662464
    170786 3o20:C (1.9) BS01 HEC ? GO:0005515 ... P00004 24662464
    170787 3o23:A (2.1) BS01 MQY 2.7.10.1 GO:0004672 ... P08069 21441024 MOAD: ic50=0.5uM
    170788 3o26:A (1.91) BS01 NDP 1.1.1.248 GO:0016020 ... Q071N0 21169353
    170789 3o28:A (2.0) BS01 O28 ? GO:0015276 ... P19491 20805031
    170790 3o28:A (2.0) BS02 GLU ? GO:0015276 ... P19491 20805031
    170791 3o29:A (2.02) BS01 GLU ? GO:0015276 ... P19491 20805031
    170792 3o29:A (2.02) BS02 O29 ? GO:0015276 ... P19491 20805031
    170793 3o2a:A (1.9) BS01 O30 ? GO:0015276 ... P19491 20805031
    170794 3o2a:A (1.9) BS02 GLU ? GO:0015276 ... P19491 20805031
    170795 3o2b:A (2.05) BS01 peptide ? GO:0005515 ... P0A8Q6 21777811
    170796 3o2b:C (2.05) BS01 peptide ? GO:0005515 ... P0A8Q6 21777811
    170797 3o2e:A (1.95) BS01 IOD ? GO:0005634 ... A7ATL3 21359836
    170798 3o2e:A (1.95) BS02 MG ? GO:0005634 ... A7ATL3 21359836
    170799 3o2f:A (2.0) BS01 P54 ? GO:0005524 ... P41148 23995768
    170800 3o2f:B (2.0) BS01 P54 ? GO:0005524 ... P41148 23995768

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).