SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    17001 1gpu:A (1.86) BS01 CA 2.2.1.1 GO:0004802 ... P23254 11773632
    17002 1gpu:A (1.86) BS02 THD 2.2.1.1 GO:0004802 ... P23254 11773632
    17003 1gpu:A (1.86) BS03 THD 2.2.1.1 GO:0004802 ... P23254 11773632
    17004 1gpu:B (1.86) BS01 THD 2.2.1.1 GO:0004802 ... P23254 11773632
    17005 1gpu:B (1.86) BS02 CA 2.2.1.1 GO:0004802 ... P23254 11773632
    17006 1gpu:B (1.86) BS03 THD 2.2.1.1 GO:0004802 ... P23254 11773632
    17007 1gpw:C (2.4) BS01 PO4 4.3.2.10 GO:0000105 ... Q9X0C6 11839304
    17008 1gpw:C (2.4) BS02 PO4 4.3.2.10 GO:0000105 ... Q9X0C6 11839304
    17009 1gpw:E (2.4) BS01 PO4 4.3.2.10 GO:0000105 ... Q9X0C6 11839304
    17010 1gpx:A (-1.00) BS01 GA ? GO:0005515 ... P00259 9835048
    17011 1gpy:A (2.4) BS01 G6P 2.4.1.1 GO:0004645 ... P00489 8331662 MOAD: Kd~25uM
    17012 1gpy:A (2.4) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 8331662
    17013 1gpz:A (2.9) BS01 FUC 3.4.21.41 GO:0004252 ... P00736 11823416
    17014 1gpz:A (2.9) BS02 FUC 3.4.21.41 GO:0004252 ... P00736 11823416
    17015 1gpz:B (2.9) BS01 FUC 3.4.21.41 GO:0004252 ... P00736 11823416
    17016 1gq1:A (1.4) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17017 1gq1:A (1.4) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17018 1gq1:A (1.4) BS03 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17019 1gq1:A (1.4) BS04 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17020 1gq1:A (1.4) BS05 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17021 1gq1:B (1.4) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17022 1gq1:B (1.4) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17023 1gq1:B (1.4) BS03 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17024 1gq1:B (1.4) BS04 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17025 1gq1:B (1.4) BS05 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17026 1gq1:B (1.4) BS06 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17027 1gq1:B (1.4) BS07 SO4 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 12556530
    17028 1gq2:A (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17029 1gq2:A (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17030 1gq2:A (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17031 1gq2:B (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17032 1gq2:B (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17033 1gq2:B (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17034 1gq2:C (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17035 1gq2:C (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17036 1gq2:C (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17037 1gq2:D (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17038 1gq2:D (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17039 1gq2:D (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17040 1gq2:E (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17041 1gq2:E (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17042 1gq2:E (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17043 1gq2:F (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17044 1gq2:F (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17045 1gq2:F (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17046 1gq2:G (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17047 1gq2:G (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17048 1gq2:G (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17049 1gq2:H (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17050 1gq2:H (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17051 1gq2:H (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17052 1gq2:I (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17053 1gq2:I (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17054 1gq2:I (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17055 1gq2:J (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17056 1gq2:J (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17057 1gq2:J (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17058 1gq2:K (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17059 1gq2:K (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17060 1gq2:K (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17061 1gq2:L (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17062 1gq2:L (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17063 1gq2:L (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17064 1gq2:M (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17065 1gq2:M (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17066 1gq2:M (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17067 1gq2:N (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17068 1gq2:N (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17069 1gq2:N (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17070 1gq2:O (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17071 1gq2:O (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17072 1gq2:O (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17073 1gq2:P (2.5) BS01 NAP 1.1.1.40 GO:0004470 ... P40927 11790843
    17074 1gq2:P (2.5) BS02 OXL 1.1.1.40 GO:0004470 ... P40927 11790843
    17075 1gq2:P (2.5) BS03 MN 1.1.1.40 GO:0004470 ... P40927 11790843
    17076 1gq6:A (1.75) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17077 1gq6:A (1.75) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17078 1gq6:B (1.75) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17079 1gq6:B (1.75) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17080 1gq6:C (1.75) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17081 1gq6:C (1.75) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17082 1gq7:A (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17083 1gq7:A (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17084 1gq7:B (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17085 1gq7:B (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17086 1gq7:C (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17087 1gq7:C (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17088 1gq7:D (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17089 1gq7:D (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17090 1gq7:E (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17091 1gq7:E (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17092 1gq7:F (2.45) BS01 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17093 1gq7:F (2.45) BS02 MN 3.5.3.22 GO:0008783 ... P0DJQ3 12020346
    17094 1gq9:A (2.6) BS01 MG 2.7.7.38 GO:0005737 ... P42216 11802716
    17095 1gq9:A (2.6) BS02 CTP 2.7.7.38 GO:0005737 ... P42216 11802716
    17096 1gq9:B (2.6) BS01 MG 2.7.7.38 GO:0005737 ... P42216 11802716
    17097 1gq9:B (2.6) BS02 CTP 2.7.7.38 GO:0005737 ... P42216 11802716
    17098 1gqa:A (1.8) BS01 HEC ? GO:0005506 ... P00148 N/A
    17099 1gqa:D (1.8) BS01 HEC ? GO:0005506 ... P00148 N/A
    17100 1gqb:A (1.8) BS01 BR ? GO:0005537 ... P11717 12499540
    17101 1gqb:A (1.8) BS02 BR ? GO:0005537 ... P11717 12499540
    17102 1gqb:B (1.8) BS01 BR ? GO:0005537 ... P11717 12499540
    17103 1gqb:B (1.8) BS02 BR ? GO:0005537 ... P11717 12499540
    17104 1gqc:A (2.6) BS01 MG 2.7.7.38 GO:0005737 ... P42216 11802716
    17105 1gqc:A (2.6) BS02 CMK 2.7.7.38 GO:0005737 ... P42216 11802716
    17106 1gqc:B (2.6) BS01 MG 2.7.7.38 GO:0005737 ... P42216 11802716
    17107 1gqc:B (2.6) BS02 C5P 2.7.7.38 GO:0005737 ... P42216 11802716
    17108 1gqg:A (1.7) BS01 DCD 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17109 1gqg:A (1.7) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17110 1gqg:B (1.7) BS01 DCD 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17111 1gqg:B (1.7) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17112 1gqg:C (1.7) BS01 DCD 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17113 1gqg:C (1.7) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17114 1gqg:D (1.7) BS01 DCD 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17115 1gqg:D (1.7) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17116 1gqh:A (2.15) BS01 KOJ 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17117 1gqh:A (2.15) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17118 1gqh:B (2.15) BS01 KOJ 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17119 1gqh:B (2.15) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17120 1gqh:C (2.15) BS01 KOJ 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17121 1gqh:C (2.15) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17122 1gqh:D (2.15) BS01 KOJ 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17123 1gqh:D (2.15) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12069585
    17124 1gqi:A (1.48) BS01 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17125 1gqi:A (1.48) BS02 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17126 1gqi:A (1.48) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17127 1gqi:B (1.48) BS01 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17128 1gqi:B (1.48) BS02 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17129 1gqi:B (1.48) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17130 1gqi:B (1.48) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17131 1gqj:A (1.9) BS01 XYP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17132 1gqj:A (1.9) BS02 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17133 1gqj:A (1.9) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17134 1gqj:A (1.9) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17135 1gqj:A (1.9) BS05 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17136 1gqj:B (1.9) BS01 XYP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17137 1gqj:B (1.9) BS02 XYP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17138 1gqj:B (1.9) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17139 1gqj:B (1.9) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17140 1gqj:B (1.9) BS05 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17141 1gqk:A (1.9) BS01 BDP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17142 1gqk:A (1.9) BS02 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17143 1gqk:A (1.9) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17144 1gqk:A (1.9) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17145 1gqk:B (1.9) BS01 BDP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17146 1gqk:B (1.9) BS02 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17147 1gqk:B (1.9) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17148 1gqk:B (1.9) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17149 1gql:A (1.67) BS01 XYP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17150 1gql:A (1.67) BS02 BDP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17151 1gql:A (1.67) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17152 1gql:A (1.67) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17153 1gql:A (1.67) BS05 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17154 1gql:A (1.67) BS06 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17155 1gql:B (1.67) BS01 XYP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17156 1gql:B (1.67) BS02 BDP 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17157 1gql:B (1.67) BS03 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17158 1gql:B (1.67) BS04 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17159 1gql:B (1.67) BS05 CO 3.2.1.131 GO:0005576 ... B3PC73 11937059
    17160 1gqm:A (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17161 1gqm:A (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17162 1gqm:A (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17163 1gqm:B (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17164 1gqm:B (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17165 1gqm:B (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17166 1gqm:C (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17167 1gqm:C (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17168 1gqm:C (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17169 1gqm:D (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17170 1gqm:D (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17171 1gqm:D (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17172 1gqm:E (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17173 1gqm:E (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17174 1gqm:E (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17175 1gqm:F (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17176 1gqm:F (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17177 1gqm:F (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17178 1gqm:G (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17179 1gqm:G (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17180 1gqm:G (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17181 1gqm:H (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17182 1gqm:H (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17183 1gqm:H (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17184 1gqm:I (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17185 1gqm:I (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17186 1gqm:I (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17187 1gqm:J (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17188 1gqm:J (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17189 1gqm:J (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17190 1gqm:K (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17191 1gqm:K (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17192 1gqm:K (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17193 1gqm:L (2.7) BS01 CA ? GO:0002548 ... P80511 11856825
    17194 1gqm:L (2.7) BS02 CA ? GO:0002548 ... P80511 11856825
    17195 1gqm:L (2.7) BS03 CA ? GO:0002548 ... P80511 11856825
    17196 1gqr:A (2.2) BS01 SAF 3.1.1.7 GO:0001507 ... P04058 11888271 BindingDB: Ki=700nM
    17197 1gqr:A (2.2) BS02 EMM 3.1.1.7 GO:0001507 ... P04058 11888271
    17198 1gqs:A (3.0) BS01 SAF 3.1.1.7 GO:0001507 ... P04058 11888271 BindingDB: Ki=700nM
    17199 1gqt:A (2.34) BS01 CS 2.7.1.15 GO:0004747 ... P0A9J6 11786021
    17200 1gqt:A (2.34) BS02 ACP 2.7.1.15 GO:0004747 ... P0A9J6 11786021

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).