SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    177801 3q4u:B (1.82) BS01 LDN 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=17nM
    177802 3q4u:C (1.82) BS01 LDN 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=17nM
    177803 3q4u:D (1.82) BS01 LDN 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=17nM
    177804 3q4w:A (1.441) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177805 3q4w:A (1.441) BS02 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177806 3q4w:A (1.441) BS03 POP 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177807 3q4y:A (2.3) BS01 CA 3.1.1.4 GO:0004623 ... P60045 N/A
    177808 3q4z:A (1.887) BS01 ANP 2.7.11.1 GO:0004672 ... Q13153 22153498
    177809 3q53:A (2.09) BS01 ATP 2.7.11.1 GO:0004672 ... Q13153 22153498
    177810 3q5d:A (2.699) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177811 3q5e:A (3.013) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177812 3q5e:A (3.013) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177813 3q5e:C (3.013) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177814 3q5e:E (3.013) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177815 3q5e:G (3.013) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177816 3q5e:G (3.013) BS02 MG 3.6.5.- GO:0003924 ... Q8WXF7 21220294
    177817 3q5f:A (2.96) BS01 dna ? GO:0003677 ... P40676 21550983
    177818 3q5f:A (2.96) BS02 dna ? GO:0003677 ... P40676 21550983
    177819 3q5f:B (2.96) BS01 dna ? GO:0003677 ... P40676 21550983
    177820 3q5f:B (2.96) BS02 dna ? GO:0003677 ... P40676 21550983
    177821 3q5g:A (1.77) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    177822 3q5h:A (2.16) BS01 RX6 3.4.23.15 GO:0004190 ... P00797 24900262 BindingDB: IC50=0.48nM
    177823 3q5h:B (2.16) BS01 RX6 3.4.23.15 GO:0004190 ... P00797 24900262 BindingDB: IC50=0.48nM
    177824 3q5i:A (2.1) BS01 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177825 3q5i:A (2.1) BS02 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177826 3q5i:A (2.1) BS03 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177827 3q5i:A (2.1) BS04 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177828 3q5i:A (2.1) BS05 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177829 3q5i:A (2.1) BS06 CA 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177830 3q5i:A (2.1) BS07 ANP 2.7.11.1 GO:0004672 ... A0A509AHB6 N/A
    177831 3q5j:A (2.1) BS01 D1S ? GO:0005524 ... Q4Q4I6 N/A
    177832 3q5k:A (2.35) BS01 D1U ? GO:0005524 ... Q4Q4I6 N/A
    177833 3q5l:A (2.65) BS01 KX2 ? GO:0005524 ... Q4Q4I6 N/A
    177834 3q5l:B (2.65) BS01 KX2 ? GO:0005524 ... Q4Q4I6 N/A
    177835 3q5l:B (2.65) BS02 KX2 ? GO:0005524 ... Q4Q4I6 N/A
    177836 3q5l:C (2.65) BS01 KX2 ? GO:0005524 ... Q4Q4I6 N/A
    177837 3q5l:D (2.65) BS01 KX2 ? GO:0005524 ... Q4Q4I6 N/A
    177838 3q5p:A (2.942) BS01 dna ? GO:0003677 ... P39075 21690368
    177839 3q5p:A (2.942) BS02 TAC ? GO:0003677 ... P39075 21690368
    177840 3q5r:A (3.05) BS01 dna ? GO:0003677 ... P39075 21690368
    177841 3q5r:A (3.05) BS02 KAN ? GO:0003677 ... P39075 21690368
    177842 3q5s:A (3.1) BS01 dna ? GO:0003677 ... P39075 21690368
    177843 3q5u:A (2.5) BS01 peptide ? GO:0005737 ... P52293 21690087
    177844 3q5v:A (1.29) BS01 MG 3.6.1.1 GO:0000287 ... H2L2L6 N/A
    177845 3q5v:A (1.29) BS02 MG 3.6.1.1 GO:0000287 ... H2L2L6 N/A
    177846 3q5v:B (1.29) BS01 MG 3.6.1.1 GO:0000287 ... H2L2L6 N/A
    177847 3q5v:B (1.29) BS02 MG 3.6.1.1 GO:0000287 ... H2L2L6 N/A
    177848 3q60:A (1.72) BS01 ATP 2.7.11.1 GO:0004672 ... F2YGR7 21708941
    177849 3q65:A (2.09) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 21084309
    177850 3q65:B (2.09) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 21084309
    177851 3q67:A (1.55) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 21084309
    177852 3q67:B (1.55) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 21084309
    177853 3q6d:A (1.97) BS01 CA 3.4.13.9 GO:0004177 ... A0A6L7GZS1 N/A
    177854 3q6d:B (1.97) BS01 CA 3.4.13.9 GO:0004177 ... A0A6L7GZS1 N/A
    177855 3q6d:C (1.97) BS01 CA 3.4.13.9 GO:0004177 ... A0A6L7GZS1 N/A
    177856 3q6d:D (1.97) BS01 CA 3.4.13.9 GO:0004177 ... A0A6L7GZS1 N/A
    177857 3q6e:D (2.05) BS01 peptide ? GO:0005179 ... P01308 21473587
    177858 3q6e:D (2.05) BS02 peptide ? GO:0005179 ... P01308 21473587
    177859 3q6e:D (2.05) BS03 QQ7 ? GO:0005179 ... P01308 21473587
    177860 3q6i:A (2.59) BS01 NAD 1.1.1.100 GO:0003824 ... I6Y778 N/A
    177861 3q6i:B (2.59) BS01 NAD 1.1.1.100 GO:0003824 ... I6Y778 N/A
    177862 3q6i:C (2.59) BS01 NAD 1.1.1.100 GO:0003824 ... I6Y778 N/A
    177863 3q6i:D (2.59) BS01 NAD 1.1.1.100 GO:0003824 ... I6Y778 N/A
    177864 3q6j:A (1.92) BS01 NAP 1.8.1.5 GO:0016491 ... Q56839 21192936
    177865 3q6j:A (1.92) BS02 FAD 1.8.1.5 GO:0016491 ... Q56839 21192936
    177866 3q6j:A (1.92) BS03 KPC 1.8.1.5 GO:0016491 ... Q56839 21192936
    177867 3q6j:A (1.92) BS04 MG 1.8.1.5 GO:0016491 ... Q56839 21192936
    177868 3q6j:A (1.92) BS05 BCT 1.8.1.5 GO:0016491 ... Q56839 21192936
    177869 3q6j:B (1.92) BS01 BCT 1.8.1.5 GO:0016491 ... Q56839 21192936
    177870 3q6j:B (1.92) BS02 NAP 1.8.1.5 GO:0016491 ... Q56839 21192936
    177871 3q6j:B (1.92) BS03 FAD 1.8.1.5 GO:0016491 ... Q56839 21192936
    177872 3q6j:B (1.92) BS04 COM 1.8.1.5 GO:0016491 ... Q56839 21192936
    177873 3q6j:B (1.92) BS05 MG 1.8.1.5 GO:0016491 ... Q56839 21192936
    177874 3q6k:A (2.52) BS01 SRO ? GO:0005576 ... Q5WPU9 21795673 Manual survey: Kd=4.3nM (21795673)
    177875 3q6k:B (2.52) BS01 SRO ? GO:0005576 ... Q5WPU9 21795673 Manual survey: Kd=4.3nM (21795673)
    177876 3q6s:A (1.93) BS01 peptide ? GO:0005634 ... P83916 21346195
    177877 3q6s:A (1.93) BS02 peptide ? GO:0005634 ... P83916 21346195
    177878 3q6s:B (1.93) BS01 peptide ? GO:0005634 ... P83916 21346195
    177879 3q6s:C (1.93) BS01 peptide ? GO:0005634 ... P83916 21346195
    177880 3q6s:D (1.93) BS01 peptide ? GO:0005634 ... P83916 21346195
    177881 3q6v:A (1.37) BS01 GOL 3.5.2.6 GO:0008270 ... Q9RMI1 21762699
    177882 3q6v:A (1.37) BS02 ZN 3.5.2.6 GO:0008270 ... Q9RMI1 21762699
    177883 3q6v:B (1.37) BS01 GOL 3.5.2.6 GO:0008270 ... Q9RMI1 21762699
    177884 3q6v:B (1.37) BS02 ZN 3.5.2.6 GO:0008270 ... Q9RMI1 21762699
    177885 3q6w:A (1.75) BS01 Q6W 2.7.10.1 GO:0004672 ... P08581 21247903 MOAD: Kd=27nM
    BindingDB: IC50=85nM
    177886 3q6y:A (1.351) BS01 S47 3.4.23.22 GO:0004190 ... P11838 N/A
    177887 3q6z:A (2.23) BS01 APR 2.4.2.- N/A Q460N5 23473667
    177888 3q70:A (1.4) BS01 RIT 3.4.23.24 GO:0004190 ... P0CS83 N/A
    177889 3q71:A (2.2) BS01 AR6 2.4.2.- N/A Q460N5 23473667
    177890 3q72:A (1.655) BS01 GNP ? GO:0003924 ... P55042 21903096
    177891 3q72:A (1.655) BS02 CA ? GO:0003924 ... P55042 21903096
    177892 3q72:B (1.655) BS01 GNP ? GO:0003924 ... P55042 21903096
    177893 3q72:B (1.655) BS02 MG ? GO:0003924 ... P55042 21903096
    177894 3q72:B (1.655) BS03 CA ? GO:0003924 ... P55042 21903096
    177895 3q73:A (2.3) BS01 FRU N/A GO:0008318 ... N/A 21816822
    177896 3q73:B (2.3) BS01 GLC N/A GO:0003824 ... N/A 21816822
    177897 3q73:B (2.3) BS02 FRU N/A GO:0003824 ... N/A 21816822
    177898 3q73:B (2.3) BS03 GLC N/A GO:0003824 ... N/A 21816822
    177899 3q73:B (2.3) BS04 ZN N/A GO:0003824 ... N/A 21816822
    177900 3q73:B (2.3) BS05 3CX N/A GO:0003824 ... N/A 21816822
    177901 3q73:B (2.3) BS06 3CX N/A GO:0003824 ... N/A 21816822
    177902 3q73:B (2.3) BS07 3CX N/A GO:0003824 ... N/A 21816822
    177903 3q75:A (2.14) BS01 peptide N/A GO:0008318 ... N/A 21816822
    177904 3q75:A (2.14) BS02 FII N/A GO:0008318 ... N/A 21816822
    177905 3q75:B (2.14) BS01 peptide N/A GO:0003824 ... N/A 21816822
    177906 3q75:B (2.14) BS02 ZN N/A GO:0003824 ... N/A 21816822
    177907 3q75:B (2.14) BS03 FII N/A GO:0003824 ... N/A 21816822
    177908 3q75:B (2.14) BS04 3CX N/A GO:0003824 ... N/A 21816822
    177909 3q75:B (2.14) BS05 3CX N/A GO:0003824 ... N/A 21816822
    177910 3q76:A (1.861) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 21549129
    177911 3q76:B (1.861) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 21549129
    177912 3q77:A (1.998) BS01 FUC 3.4.21.37 GO:0000122 ... P08246 21549129
    177913 3q77:A (1.998) BS02 2HY 3.4.21.37 GO:0000122 ... P08246 21549129 MOAD: ic50=6nM
    177914 3q78:A (2.2) BS01 peptide N/A GO:0008318 ... N/A 21816822
    177915 3q78:B (2.2) BS01 peptide N/A GO:0003824 ... N/A 21816822
    177916 3q78:B (2.2) BS02 ZN N/A GO:0003824 ... N/A 21816822
    177917 3q78:B (2.2) BS03 3CX N/A GO:0003824 ... N/A 21816822
    177918 3q78:B (2.2) BS04 3CX N/A GO:0003824 ... N/A 21816822
    177919 3q78:B (2.2) BS05 FPS N/A GO:0003824 ... N/A 21816822
    177920 3q79:B (2.506) BS01 peptide N/A GO:0003824 ... N/A 21816822
    177921 3q79:B (2.506) BS02 ZN N/A GO:0003824 ... N/A 21816822
    177922 3q79:B (2.506) BS03 FAR N/A GO:0003824 ... N/A 21816822
    177923 3q79:B (2.506) BS04 3CX N/A GO:0003824 ... N/A 21816822
    177924 3q79:B (2.506) BS05 3CX N/A GO:0003824 ... N/A 21816822
    177925 3q79:B (2.506) BS06 3CX N/A GO:0003824 ... N/A 21816822
    177926 3q7a:A (2.0) BS01 FRU N/A GO:0008318 ... N/A 21816822
    177927 3q7a:B (2.0) BS01 GLC N/A GO:0003824 ... N/A 21816822
    177928 3q7a:B (2.0) BS02 FRU N/A GO:0003824 ... N/A 21816822
    177929 3q7a:B (2.0) BS03 GLC N/A GO:0003824 ... N/A 21816822
    177930 3q7a:B (2.0) BS04 ZN N/A GO:0003824 ... N/A 21816822
    177931 3q7a:B (2.0) BS05 3FX N/A GO:0003824 ... N/A 21816822
    177932 3q7a:B (2.0) BS06 3FX N/A GO:0003824 ... N/A 21816822
    177933 3q7a:B (2.0) BS07 3FX N/A GO:0003824 ... N/A 21816822
    177934 3q7a:B (2.0) BS08 FPP N/A GO:0003824 ... N/A 21816822
    177935 3q7a:B (2.0) BS09 778 N/A GO:0003824 ... N/A 21816822
    177936 3q7b:A (2.0) BS01 ZN 3.1.13.- N/A P13699 21262835
    177937 3q7c:A (1.5) BS01 ZN 3.1.13.- N/A P13699 21262835
    177938 3q7c:A (1.5) BS02 MN 3.1.13.- N/A P13699 21262835
    177939 3q7d:A (2.4) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 22053353
    177940 3q7d:A (2.4) BS02 NPX 1.14.99.1 GO:0001516 ... Q05769 22053353 MOAD: ic50=430nM
    177941 3q7d:B (2.4) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 22053353
    177942 3q7d:B (2.4) BS02 NPX 1.14.99.1 GO:0001516 ... Q05769 22053353 MOAD: ic50=430nM
    177943 3q7e:A (2.2) BS01 SAH 2.1.1.319 GO:0005515 ... Q63009 21697082
    177944 3q7e:A (2.2) BS02 MG 2.1.1.319 GO:0005515 ... Q63009 21697082
    177945 3q7f:A (2.2) BS01 FRU N/A GO:0008318 ... N/A 21816822
    177946 3q7f:B (2.2) BS01 GLC N/A GO:0003824 ... N/A 21816822
    177947 3q7f:B (2.2) BS02 FRU N/A GO:0003824 ... N/A 21816822
    177948 3q7f:B (2.2) BS03 ZN N/A GO:0003824 ... N/A 21816822
    177949 3q7f:B (2.2) BS04 3CX N/A GO:0003824 ... N/A 21816822
    177950 3q7f:B (2.2) BS05 3CX N/A GO:0003824 ... N/A 21816822
    177951 3q7f:B (2.2) BS06 3CX N/A GO:0003824 ... N/A 21816822
    177952 3q7f:B (2.2) BS07 FPP N/A GO:0003824 ... N/A 21816822
    177953 3q7f:B (2.2) BS08 ED2 N/A GO:0003824 ... N/A 21816822
    177954 3q7g:A (2.3) BS01 GU4 ? GO:0016020 ... P51693 21715329
    177955 3q7g:A (2.3) BS02 YYJ ? GO:0016020 ... P51693 21715329
    177956 3q7g:A (2.3) BS03 GU4 ? GO:0016020 ... P51693 21715329
    177957 3q7g:A (2.3) BS04 YYJ ? GO:0016020 ... P51693 21715329
    177958 3q7g:B (2.3) BS01 YYJ ? GO:0016020 ... P51693 21715329
    177959 3q7g:B (2.3) BS02 GU4 ? GO:0016020 ... P51693 21715329
    177960 3q7g:B (2.3) BS03 YYJ ? GO:0016020 ... P51693 21715329
    177961 3q7h:A (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177962 3q7h:B (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177963 3q7h:B (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177964 3q7h:C (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177965 3q7h:C (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177966 3q7h:D (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177967 3q7h:D (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177968 3q7h:E (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177969 3q7h:E (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177970 3q7h:F (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177971 3q7h:F (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177972 3q7h:G (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177973 3q7h:G (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177974 3q7h:H (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177975 3q7h:H (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177976 3q7h:I (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177977 3q7h:I (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177978 3q7h:J (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177979 3q7h:J (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177980 3q7h:K (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177981 3q7h:K (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177982 3q7h:L (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177983 3q7h:L (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177984 3q7h:M (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177985 3q7h:M (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177986 3q7h:N (2.5) BS01 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177987 3q7h:N (2.5) BS02 CA 3.4.21.92 GO:0004176 ... Q83DJ2 N/A
    177988 3q7i:A (1.54) BS01 6PG 5.3.1.9 GO:0004347 ... Q5NFC4 N/A
    177989 3q7j:A (2.91) BS01 ZN 3.4.11.- GO:0005615 ... O93655 21493078
    177990 3q7j:A (2.91) BS02 FBO 3.4.11.- GO:0005615 ... O93655 21493078
    177991 3q7j:B (2.91) BS01 ZN 3.4.11.- GO:0005615 ... O93655 21493078
    177992 3q7l:A (2.2) BS01 SO4 ? GO:0016020 ... P51693 21715329
    177993 3q7l:B (2.2) BS01 SO4 ? GO:0016020 ... P51693 21715329
    177994 3q7p:A (2.5) BS01 GNP ? GO:0003924 ... P55042 21903096
    177995 3q7p:A (2.5) BS02 MG ? GO:0003924 ... P55042 21903096
    177996 3q7p:B (2.5) BS01 GNP ? GO:0003924 ... P55042 21903096
    177997 3q7p:B (2.5) BS02 MG ? GO:0003924 ... P55042 21903096
    177998 3q7q:A (2.3) BS01 GNP ? GO:0003924 ... P55042 21903096
    177999 3q7q:A (2.3) BS02 MG ? GO:0003924 ... P55042 21903096
    178000 3q7q:A (2.3) BS03 CA ? GO:0003924 ... P55042 21903096

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).