SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    179801 3qse:B (1.75) BS02 FAD 1.5.3.1 GO:0005737 ... P40859 21568312
    179802 3qse:B (1.75) BS03 SAR 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd>10mM
    179803 3qsi:A (3.08) BS01 NI ? N/A O25896 22451934
    179804 3qsi:B (3.08) BS01 NI ? N/A O25896 22451934
    179805 3qsi:C (3.08) BS01 NI ? N/A O25896 22451934
    179806 3qsi:D (3.08) BS01 NI ? N/A O25896 22451934
    179807 3qsi:E (3.08) BS01 NI ? N/A O25896 22451934
    179808 3qsi:F (3.08) BS01 NI ? N/A O25896 22451934
    179809 3qsi:G (3.08) BS01 NI ? N/A O25896 22451934
    179810 3qsi:H (3.08) BS01 NI ? N/A O25896 22451934
    179811 3qsi:I (3.08) BS01 NI ? N/A O25896 22451934
    179812 3qsj:A (1.7) BS01 CA ? GO:0016818 ... C8WVE1 N/A
    179813 3qsm:A (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 21568312
    179814 3qsm:A (1.9) BS02 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179815 3qsm:A (1.9) BS03 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179816 3qsm:B (1.9) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 21568312
    179817 3qsm:B (1.9) BS02 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179818 3qsm:B (1.9) BS03 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179819 3qsp:A (2.1) BS01 MAN ? GO:0005515 ... A0A0H2URZ6 21388958
    179820 3qsp:B (2.1) BS01 MAN ? GO:0005515 ... A0A0H2URZ6 21388958
    179821 3qss:A (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 21568312
    179822 3qss:A (1.85) BS02 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179823 3qss:A (1.85) BS03 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179824 3qss:A (1.85) BS04 MTG 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd=4.9mM
    179825 3qss:B (1.85) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 21568312
    179826 3qss:B (1.85) BS02 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179827 3qss:B (1.85) BS03 CL 1.5.3.1 GO:0005737 ... P40859 21568312
    179828 3qss:B (1.85) BS04 MTG 1.5.3.1 GO:0005737 ... P40859 21568312 MOAD: Kd=4.9mM
    179829 3qsu:A (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179830 3qsu:B (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179831 3qsu:B (2.2) BS02 ZN N/A GO:0003723 ... N/A 22965117
    179832 3qsu:C (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179833 3qsu:D (2.2) BS01 ZN N/A GO:0003723 ... N/A 22965117
    179834 3qsu:E (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179835 3qsu:F (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179836 3qsu:H (2.2) BS01 rna N/A GO:0003723 ... N/A 22965117
    179837 3qsu:S (2.2) BS01 ZN N/A GO:0003723 ... N/A 22965117
    179838 3qsv:A (2.708) BS01 dna ? GO:0005667 ... P97471 N/A
    179839 3qsv:A (2.708) BS02 dna ? GO:0005667 ... P97471 N/A
    179840 3qsv:A (2.708) BS03 ZN ? GO:0005667 ... P97471 N/A
    179841 3qsv:B (2.708) BS01 dna ? GO:0005667 ... P97471 N/A
    179842 3qsv:B (2.708) BS02 dna ? GO:0005667 ... P97471 N/A
    179843 3qsv:B (2.708) BS03 ZN ? GO:0005667 ... P97471 N/A
    179844 3qsv:C (2.708) BS01 dna ? GO:0005667 ... P97471 N/A
    179845 3qsv:C (2.708) BS02 dna ? GO:0005667 ... P97471 N/A
    179846 3qsv:C (2.708) BS03 ZN ? GO:0005667 ... P97471 N/A
    179847 3qsv:D (2.708) BS01 dna ? GO:0005667 ... P97471 N/A
    179848 3qsv:D (2.708) BS02 dna ? GO:0005667 ... P97471 N/A
    179849 3qsv:D (2.708) BS03 ZN ? GO:0005667 ... P97471 N/A
    179850 3qsy:A (3.2) BS01 rna 3.6.5.3 GO:0000049 ... Q980A5 23291527
    179851 3qsy:A (3.2) BS02 GNP 3.6.5.3 GO:0000049 ... Q980A5 23291527
    179852 3qsy:B (3.2) BS01 rna ? GO:0003723 ... Q97Z79 23291527
    179853 3qsz:A (2.389) BS01 MN N/A GO:0008289 ... N/A N/A
    179854 3qsz:B (2.389) BS01 MN N/A GO:0008289 ... N/A N/A
    179855 3qt0:A (2.496) BS01 peptide ? GO:0003677 ... P37231 21986665
    179856 3qt0:A (2.496) BS02 486 ? GO:0003677 ... P37231 21986665
    179857 3qt1:A (4.3) BS01 MG 2.7.7.6 GO:0001172 ... P04050 21454497
    179858 3qt1:B (4.3) BS01 ZN 2.7.7.6 GO:0001172 ... P08518 21454497
    179859 3qt1:C (4.3) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 21454497
    179860 3qt1:J (4.3) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 21454497
    179861 3qt1:L (4.3) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 21454497
    179862 3qt2:B (2.55) BS01 BGC ? GO:0004896 ... Q01344 22153509
    179863 3qt6:A (2.047) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=4.3uM
    179864 3qt6:B (2.047) BS01 2P0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=4.3uM
    179865 3qt7:A (2.199) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=49uM
    179866 3qt7:B (2.199) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869 MOAD: Ki=49uM
    179867 3qt8:A (2.1) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869
    179868 3qt8:B (2.1) BS01 FM0 4.1.1.33 GO:0004163 ... Q9FD73 21561869
    179869 3qt9:A (2.05) BS01 Z4Y ? GO:0005975 ... Q8XNB2 21388958
    179870 3qt9:A (2.05) BS02 MAN ? GO:0005975 ... Q8XNB2 21388958
    179871 3qta:A (2.0) BS01 CA ? N/A Q5V4K4 N/A
    179872 3qta:A (2.0) BS02 CA ? N/A Q5V4K4 N/A
    179873 3qta:B (2.0) BS01 CA ? N/A Q5V4K4 N/A
    179874 3qtb:A (2.1) BS01 D5M ? N/A O29432 23745136
    179875 3qtc:A (1.75) BS01 0A1 6.1.1.26 GO:0000049 ... Q8PWY1 21545173
    179876 3qtc:A (1.75) BS02 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 21545173
    179877 3qtf:A (1.5703) BS01 05S 3.6.4.10 GO:0005524 ... P07900 21420297 MOAD: ic50=0.11uM
    BindingDB: IC50=110nM
    179878 3qti:A (2.0) BS01 3QT 2.7.10.1 GO:0004672 ... P08581 21697284 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    179879 3qti:B (2.0) BS01 3QT 2.7.10.1 GO:0004672 ... P08581 21697284 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    179880 3qtk:A (1.849) BS01 TFA ? GO:0008083 ... P15692 21744452
    179881 3qtk:D (1.849) BS01 TFA ? GO:0008083 ... P15692 21744452
    179882 3qtk:F (1.849) BS01 TFA ? GO:0008083 ... P15692 21744452
    179883 3qtm:A (2.15) BS01 SO4 ? GO:0005634 ... Q9USJ7 21610214
    179884 3qtm:B (2.15) BS01 SO4 ? GO:0005634 ... Q9USJ7 21610214
    179885 3qto:H (1.52) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    179886 3qto:H (1.52) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    179887 3qto:H (1.52) BS03 10P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=74.8uM
    179888 3qtp:A (1.9) BS01 2PG 4.2.1.11 GO:0000015 ... P51555 21697600
    179889 3qtp:A (1.9) BS02 MG 4.2.1.11 GO:0000015 ... P51555 21697600
    179890 3qtp:B (1.9) BS01 2PG 4.2.1.11 GO:0000015 ... P51555 21697600
    179891 3qtp:B (1.9) BS02 MG 4.2.1.11 GO:0000015 ... P51555 21697600
    179892 3qtq:A (1.8) BS01 X35 2.7.11.22 GO:0000082 ... P24941 23600925
    179893 3qtr:A (1.85) BS01 X36 2.7.11.22 GO:0000082 ... P24941 23600925
    179894 3qts:A (1.9) BS01 X46 2.7.11.22 GO:0000082 ... P24941 23600925
    179895 3qtt:A (2.599) BS01 ANP 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179896 3qtt:A (2.599) BS02 PRO 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179897 3qtt:A (2.599) BS03 MG 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179898 3qtt:A (2.599) BS04 BAL 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179899 3qtt:B (2.599) BS01 PRO 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179900 3qtt:B (2.599) BS02 ANP 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179901 3qtt:B (2.599) BS03 BAL 6.3.2.1 GO:0003824 ... Q5NF57 N/A
    179902 3qtu:A (1.82) BS01 X44 2.7.11.22 GO:0000082 ... P24941 23600925
    179903 3qtv:H (1.63) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    179904 3qtv:H (1.63) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    179905 3qtv:H (1.63) BS03 06P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=22.5uM
    179906 3qtw:A (1.85) BS01 X3A 2.7.11.22 GO:0000082 ... P24941 23600925
    179907 3qtx:A (1.95) BS01 X43 2.7.11.22 GO:0000082 ... P24941 23600925
    179908 3qty:A (1.8) BS01 POP 6.3.3.1 GO:0004637 ... Q5NGF2 N/A
    179909 3qty:A (1.8) BS02 POP 6.3.3.1 GO:0004637 ... Q5NGF2 N/A
    179910 3qty:B (1.8) BS01 POP 6.3.3.1 GO:0004637 ... Q5NGF2 N/A
    179911 3qtz:A (2.0) BS01 X42 2.7.11.22 GO:0000082 ... P24941 23600925
    179912 3qu0:A (1.95) BS01 X40 2.7.11.22 GO:0000082 ... P24941 23600925 BindingDB: IC50=0.900000nM
    179913 3qu1:A (1.8) BS01 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179914 3qu1:A (1.8) BS02 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179915 3qu1:A (1.8) BS03 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179916 3qu1:B (1.8) BS01 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179917 3qu1:B (1.8) BS02 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179918 3qu1:B (1.8) BS03 ZN 3.5.1.88 GO:0006412 ... Q9KN16 N/A
    179919 3qu2:A (1.95) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179920 3qu2:B (1.95) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179921 3qu2:C (1.95) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179922 3qu2:D (1.95) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179923 3qu4:A (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179924 3qu4:B (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179925 3qu4:C (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179926 3qu4:D (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179927 3qu4:E (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179928 3qu4:F (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179929 3qu4:G (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179930 3qu4:H (2.1) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179931 3qu6:A (2.3) BS01 ZN ? GO:0000976 ... Q14653 21596780
    179932 3qu6:A (2.3) BS02 ZN ? GO:0000976 ... Q14653 21596780
    179933 3qu6:B (2.3) BS01 ZN ? GO:0000976 ... Q14653 21596780
    179934 3qu6:B (2.3) BS02 ZN ? GO:0000976 ... Q14653 21596780
    179935 3qu6:C (2.3) BS01 ZN ? GO:0000976 ... Q14653 21596780
    179936 3qu7:A (1.9) BS01 PO4 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179937 3qu7:A (1.9) BS02 CA 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179938 3qu7:B (1.9) BS01 CA 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179939 3qu8:A (2.8) BS01 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179940 3qu8:A (2.8) BS02 3QU 1.14.13.- GO:0004497 ... P20813 21875942
    179941 3qu8:A (2.8) BS03 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179942 3qu8:B (2.8) BS01 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179943 3qu8:B (2.8) BS02 3QU 1.14.13.- GO:0004497 ... P20813 21875942
    179944 3qu8:B (2.8) BS03 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179945 3qu8:B (2.8) BS04 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179946 3qu8:C (2.8) BS01 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179947 3qu8:C (2.8) BS02 3QU 1.14.13.- GO:0004497 ... P20813 21875942
    179948 3qu8:C (2.8) BS03 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179949 3qu8:D (2.8) BS01 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179950 3qu8:D (2.8) BS02 3QU 1.14.13.- GO:0004497 ... P20813 21875942
    179951 3qu8:D (2.8) BS03 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179952 3qu8:D (2.8) BS04 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179953 3qu8:D (2.8) BS05 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179954 3qu8:E (2.8) BS01 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179955 3qu8:E (2.8) BS02 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179956 3qu8:E (2.8) BS03 3QU 1.14.13.- GO:0004497 ... P20813 21875942
    179957 3qu8:E (2.8) BS04 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179958 3qu8:F (2.8) BS01 HEM 1.14.13.- GO:0004497 ... P20813 21875942
    179959 3qu8:F (2.8) BS02 CM5 1.14.13.- GO:0004497 ... P20813 21875942
    179960 3qu9:A (1.9) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179961 3qud:A (2.0) BS01 N3F 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=145nM
    179962 3que:A (2.7) BS01 3FF 2.7.11.24 GO:0000165 ... Q16539 22198732 BindingDB: IC50=40nM
    179963 3qug:A (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    179964 3qug:B (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    179965 3quh:A (2.7) BS01 MNR ? N/A Q931P4 21797259
    179966 3quh:B (2.7) BS01 MNR ? N/A Q931P4 21797259
    179967 3qui:A (1.933) BS01 ADP ? GO:0003723 ... Q9HUM0 23897473
    179968 3qui:A (1.933) BS02 ADP ? GO:0003723 ... Q9HUM0 23897473
    179969 3qui:B (1.933) BS01 ADP ? GO:0003723 ... Q9HUM0 23897473
    179970 3qui:C (1.933) BS01 ADP ? GO:0003723 ... Q9HUM0 23897473
    179971 3qui:D (1.933) BS01 ANP ? GO:0003723 ... Q9HUM0 23897473
    179972 3qui:D (1.933) BS02 ANP ? GO:0003723 ... Q9HUM0 23897473
    179973 3qui:E (1.933) BS01 ANP ? GO:0003723 ... Q9HUM0 23897473
    179974 3qui:E (1.933) BS02 ADE ? GO:0003723 ... Q9HUM0 23897473
    179975 3qui:F (1.933) BS01 ADP ? GO:0003723 ... Q9HUM0 23897473
    179976 3qui:F (1.933) BS02 ADE ? GO:0003723 ... Q9HUM0 23897473
    179977 3quk:A (2.41) BS01 peptide ? N/A P01899 22837158
    179978 3quk:D (2.41) BS01 peptide ? N/A P01899 22837158
    179979 3qul:A (2.0) BS01 peptide ? N/A P01899 22837158
    179980 3qul:D (2.0) BS01 peptide ? N/A P01899 22837158
    179981 3qul:G (2.0) BS01 peptide ? N/A P01899 22837158
    179982 3qul:J (2.0) BS01 peptide ? N/A P01899 22837158
    179983 3qum:H (3.2) BS01 GAL N/A N/A N/A 22037582
    179984 3qum:Q (3.2) BS01 SIA 3.4.21.77 GO:0002803 ... P07288 22037582
    179985 3qun:A (1.87) BS01 ATP 2.7.4.26 GO:0004349 ... Q56187 21728358
    179986 3quo:A (1.58) BS01 ATP 2.7.4.26 GO:0004349 ... Q56187 21728358
    179987 3quo:A (1.58) BS02 FCN 2.7.4.26 GO:0004349 ... Q56187 21728358
    179988 3qup:A (1.9) BS01 LUN 2.7.10.1 GO:0004672 ... P55144 22119469 MOAD: ic50=0.476uM
    179989 3quq:A (1.65) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179990 3quq:A (1.65) BS02 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179991 3qur:A (1.57) BS01 ADP 2.7.4.26 GO:0004349 ... Q56187 21728358
    179992 3qur:A (1.57) BS02 FM4 2.7.4.26 GO:0004349 ... Q56187 21728358
    179993 3qus:A (2.84) BS01 AGS 6.3.4.3 GO:0004329 ... P21164 N/A
    179994 3qus:B (2.84) BS01 AGS 6.3.4.3 GO:0004329 ... P21164 N/A
    179995 3qut:A (1.5) BS01 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179996 3qut:A (1.5) BS02 MG 3.6.1.1 GO:0005975 ... Q8A5V9 21894910
    179997 3qux:A (2.91) BS01 FUC ? N/A P11609 21552205
    179998 3qux:A (2.91) BS02 QUX ? N/A P11609 21552205
    179999 3qux:C (2.91) BS01 QUX ? N/A P01848 21552205
    180000 3quy:A (2.25) BS01 FUC ? N/A P11609 21552205

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).