SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    18401 1h1c:B (2.85) BS01 PLP 2.6.1.9 GO:0000105 ... Q9X0D0 15007066
    18402 1h1c:C (2.85) BS01 PLP 2.6.1.9 GO:0000105 ... Q9X0D0 15007066
    18403 1h1c:D (2.85) BS01 PLP 2.6.1.9 GO:0000105 ... Q9X0D0 15007066
    18404 1h1d:A (2.0) BS01 MG 2.1.1.6 GO:0000287 ... P22734 12237326
    18405 1h1d:A (2.0) BS02 SAM 2.1.1.6 GO:0000287 ... P22734 12237326
    18406 1h1d:A (2.0) BS03 BIA 2.1.1.6 GO:0000287 ... P22734 12237326 MOAD: Ki=6nM
    18407 1h1h:A (2.0) BS01 A2P 3.1.27.- GO:0001530 ... P12724 12356310 MOAD: Ki~6.5uM
    18408 1h1i:A (1.75) BS01 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18409 1h1i:A (1.75) BS02 QUE 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18410 1h1i:B (1.75) BS01 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18411 1h1i:B (1.75) BS02 QUE 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18412 1h1i:C (1.75) BS01 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18413 1h1i:C (1.75) BS02 QUE 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18414 1h1i:D (1.75) BS01 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18415 1h1i:D (1.75) BS02 QUE 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18416 1h1l:A (1.9) BS01 CFM 1.18.6.1 GO:0009399 ... P00466 12133839
    18417 1h1l:A (1.9) BS02 CLF 1.18.6.1 GO:0009399 ... P00466 12133839
    18418 1h1l:B (1.9) BS01 CLF 1.18.6.1 GO:0009399 ... P09772 12133839
    18419 1h1l:B (1.9) BS02 MG 1.18.6.1 GO:0009399 ... P09772 12133839
    18420 1h1l:B (1.9) BS03 MG 1.18.6.1 GO:0009399 ... P09772 12133839
    18421 1h1l:C (1.9) BS01 CFM 1.18.6.1 GO:0009399 ... P00466 12133839
    18422 1h1l:C (1.9) BS02 CLF 1.18.6.1 GO:0009399 ... P00466 12133839
    18423 1h1l:D (1.9) BS01 MG 1.18.6.1 GO:0009399 ... P09772 12133839
    18424 1h1l:D (1.9) BS02 MG 1.18.6.1 GO:0009399 ... P09772 12133839
    18425 1h1l:D (1.9) BS03 CLF 1.18.6.1 GO:0009399 ... P09772 12133839
    18426 1h1m:A (1.9) BS01 KMP 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18427 1h1m:A (1.9) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18428 1h1m:B (1.9) BS01 KMP 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18429 1h1m:B (1.9) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18430 1h1m:C (1.9) BS01 KMP 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18431 1h1m:C (1.9) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18432 1h1m:D (1.9) BS01 KMP 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18433 1h1m:D (1.9) BS02 CU 1.13.11.24 GO:0008127 ... Q7SIC2 12486225
    18434 1h1o:A (2.13) BS01 HEM ? GO:0005506 ... P74917 12737820
    18435 1h1o:A (2.13) BS02 HEM ? GO:0005506 ... P74917 12737820
    18436 1h1o:B (2.13) BS01 HEM ? GO:0005506 ... P74917 12737820
    18437 1h1o:B (2.13) BS02 HEM ? GO:0005506 ... P74917 12737820
    18438 1h1p:A (2.1) BS01 CMG 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: Ki=12uM
    BindingDB: IC50=17000nM
    18439 1h1p:C (2.1) BS01 CMG 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: Ki=12uM
    BindingDB: IC50=17000nM
    18440 1h1q:A (2.5) BS01 2A6 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: ic50=1uM
    BindingDB: IC50=2300nM
    18441 1h1q:C (2.5) BS01 2A6 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: ic50=1uM
    BindingDB: IC50=2300nM
    18442 1h1r:A (2.0) BS01 6CP 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: ic50=2.3uM
    BindingDB: IC50=2300nM
    18443 1h1r:C (2.0) BS01 6CP 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: ic50=2.3uM
    BindingDB: IC50=2300nM
    18444 1h1s:A (2.0) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: Ki=6nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    18445 1h1s:C (2.0) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 12244298 MOAD: Ki=6nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    18446 1h1t:A (1.78) BS01 COA 2.7.7.3 GO:0003824 ... P0A6I6 12837781
    18447 1h1t:B (1.78) BS01 PNS 2.7.7.3 GO:0003824 ... P0A6I6 12837781
    18448 1h1v:A (2.99) BS01 ATP 3.6.4.- GO:0000287 ... P68135 12460571
    18449 1h1v:G (2.99) BS01 CA ? GO:0051015 ... P06396 12460571
    18450 1h1v:G (2.99) BS02 CA ? GO:0051015 ... P06396 12460571
    18451 1h1v:G (2.99) BS03 CA ? GO:0051015 ... P06396 12460571
    18452 1h1v:G (2.99) BS04 CA ? GO:0051015 ... P06396 12460571
    18453 1h1w:A (2.0) BS01 SO4 2.7.11.1 GO:0004672 ... O15530 12169624
    18454 1h1w:A (2.0) BS02 SO4 2.7.11.1 GO:0004672 ... O15530 12169624
    18455 1h1w:A (2.0) BS03 ATP 2.7.11.1 GO:0004672 ... O15530 12169624
    18456 1h1x:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 14563209
    18457 1h1x:A (1.4) BS02 CYN 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 14563209
    18458 1h1y:B (1.87) BS01 SO4 5.1.3.1 GO:0004750 ... Q9SE42 12547196
    18459 1h1z:A (3.4) BS01 ZN 5.1.3.1 GO:0004750 ... Q9SE42 12547196
    18460 1h1z:A (3.4) BS02 SO4 5.1.3.1 GO:0004750 ... Q9SE42 12547196
    18461 1h1z:B (3.4) BS01 ZN 5.1.3.1 GO:0004750 ... Q9SE42 12547196
    18462 1h1z:B (3.4) BS02 SO4 5.1.3.1 GO:0004750 ... Q9SE42 12547196
    18463 1h21:A (2.5) BS01 HEC ? N/A P81040 12589573
    18464 1h21:A (2.5) BS02 HEC ? N/A P81040 12589573
    18465 1h21:A (2.5) BS03 HEC ? N/A P81040 12589573
    18466 1h21:A (2.5) BS04 HEC ? N/A P81040 12589573
    18467 1h21:B (2.5) BS01 HEC ? N/A P81040 12589573
    18468 1h21:B (2.5) BS02 HEC ? N/A P81040 12589573
    18469 1h21:B (2.5) BS03 HEC ? N/A P81040 12589573
    18470 1h21:B (2.5) BS04 HEC ? N/A P81040 12589573
    18471 1h21:C (2.5) BS01 HEC ? N/A P81040 12589573
    18472 1h21:C (2.5) BS02 HEC ? N/A P81040 12589573
    18473 1h21:C (2.5) BS03 HEC ? N/A P81040 12589573
    18474 1h21:C (2.5) BS04 HEC ? N/A P81040 12589573
    18475 1h21:D (2.5) BS01 HEC ? N/A P81040 12589573
    18476 1h21:D (2.5) BS02 HEC ? N/A P81040 12589573
    18477 1h21:D (2.5) BS03 HEC ? N/A P81040 12589573
    18478 1h21:D (2.5) BS04 HEC ? N/A P81040 12589573
    18479 1h22:A (2.15) BS01 E10 3.1.1.7 GO:0001507 ... P04058 12517147 MOAD: Ki=0.8nM
    BindingDB: Ki=0.8nM, IC50=2.4nM
    18480 1h23:A (2.15) BS01 E12 3.1.1.7 GO:0001507 ... P04058 12517147 MOAD: Ki=4.5nM
    BindingDB: Ki=4.5nM, IC50=16.0nM
    18481 1h24:B (2.5) BS01 peptide ? GO:0016538 ... P20248 12501191
    18482 1h25:B (2.5) BS01 peptide ? GO:0016538 ... P20248 12501191
    18483 1h26:B (2.24) BS01 peptide ? GO:0016538 ... P20248 12501191
    18484 1h27:B (2.2) BS01 peptide ? GO:0016538 ... P20248 12501191
    18485 1h28:B (2.8) BS01 peptide ? GO:0016538 ... P20248 12501191
    18486 1h28:D (2.8) BS01 peptide ? GO:0016538 ... P20248 12501191
    18487 1h29:A (2.51) BS01 HEC ? GO:0009055 ... P24092 12356749
    18488 1h29:A (2.51) BS02 HEC ? GO:0009055 ... P24092 12356749
    18489 1h29:A (2.51) BS03 HEC ? GO:0009055 ... P24092 12356749
    18490 1h29:A (2.51) BS04 HEC ? GO:0009055 ... P24092 12356749
    18491 1h29:A (2.51) BS05 HEC ? GO:0009055 ... P24092 12356749
    18492 1h29:A (2.51) BS06 HEC ? GO:0009055 ... P24092 12356749
    18493 1h29:A (2.51) BS07 HEC ? GO:0009055 ... P24092 12356749
    18494 1h29:A (2.51) BS08 HEC ? GO:0009055 ... P24092 12356749
    18495 1h29:A (2.51) BS09 HEC ? GO:0009055 ... P24092 12356749
    18496 1h29:A (2.51) BS10 HEC ? GO:0009055 ... P24092 12356749
    18497 1h29:A (2.51) BS11 HEC ? GO:0009055 ... P24092 12356749
    18498 1h29:A (2.51) BS12 HEC ? GO:0009055 ... P24092 12356749
    18499 1h29:A (2.51) BS13 HEC ? GO:0009055 ... P24092 12356749
    18500 1h29:A (2.51) BS14 HEC ? GO:0009055 ... P24092 12356749
    18501 1h29:A (2.51) BS15 HEC ? GO:0009055 ... P24092 12356749
    18502 1h29:A (2.51) BS16 HEC ? GO:0009055 ... P24092 12356749
    18503 1h29:B (2.51) BS01 HEC ? GO:0009055 ... P24092 12356749
    18504 1h29:B (2.51) BS02 HEC ? GO:0009055 ... P24092 12356749
    18505 1h29:B (2.51) BS03 HEC ? GO:0009055 ... P24092 12356749
    18506 1h29:B (2.51) BS04 HEC ? GO:0009055 ... P24092 12356749
    18507 1h29:B (2.51) BS05 HEC ? GO:0009055 ... P24092 12356749
    18508 1h29:B (2.51) BS06 HEC ? GO:0009055 ... P24092 12356749
    18509 1h29:B (2.51) BS07 HEC ? GO:0009055 ... P24092 12356749
    18510 1h29:B (2.51) BS08 HEC ? GO:0009055 ... P24092 12356749
    18511 1h29:B (2.51) BS09 HEC ? GO:0009055 ... P24092 12356749
    18512 1h29:B (2.51) BS10 HEC ? GO:0009055 ... P24092 12356749
    18513 1h29:B (2.51) BS11 HEC ? GO:0009055 ... P24092 12356749
    18514 1h29:B (2.51) BS12 HEC ? GO:0009055 ... P24092 12356749
    18515 1h29:B (2.51) BS13 HEC ? GO:0009055 ... P24092 12356749
    18516 1h29:B (2.51) BS14 HEC ? GO:0009055 ... P24092 12356749
    18517 1h29:B (2.51) BS15 HEC ? GO:0009055 ... P24092 12356749
    18518 1h29:B (2.51) BS16 HEC ? GO:0009055 ... P24092 12356749
    18519 1h29:C (2.51) BS01 HEC ? GO:0009055 ... P24092 12356749
    18520 1h29:C (2.51) BS02 HEC ? GO:0009055 ... P24092 12356749
    18521 1h29:C (2.51) BS03 HEC ? GO:0009055 ... P24092 12356749
    18522 1h29:C (2.51) BS04 HEC ? GO:0009055 ... P24092 12356749
    18523 1h29:C (2.51) BS05 HEC ? GO:0009055 ... P24092 12356749
    18524 1h29:C (2.51) BS06 HEC ? GO:0009055 ... P24092 12356749
    18525 1h29:C (2.51) BS07 HEC ? GO:0009055 ... P24092 12356749
    18526 1h29:C (2.51) BS08 HEC ? GO:0009055 ... P24092 12356749
    18527 1h29:C (2.51) BS09 HEC ? GO:0009055 ... P24092 12356749
    18528 1h29:C (2.51) BS10 HEC ? GO:0009055 ... P24092 12356749
    18529 1h29:C (2.51) BS11 HEC ? GO:0009055 ... P24092 12356749
    18530 1h29:C (2.51) BS12 HEC ? GO:0009055 ... P24092 12356749
    18531 1h29:C (2.51) BS13 HEC ? GO:0009055 ... P24092 12356749
    18532 1h29:C (2.51) BS14 HEC ? GO:0009055 ... P24092 12356749
    18533 1h29:C (2.51) BS15 HEC ? GO:0009055 ... P24092 12356749
    18534 1h29:C (2.51) BS16 HEC ? GO:0009055 ... P24092 12356749
    18535 1h29:D (2.51) BS01 HEC ? GO:0009055 ... P24092 12356749
    18536 1h29:D (2.51) BS02 HEC ? GO:0009055 ... P24092 12356749
    18537 1h29:D (2.51) BS03 HEC ? GO:0009055 ... P24092 12356749
    18538 1h29:D (2.51) BS04 HEC ? GO:0009055 ... P24092 12356749
    18539 1h29:D (2.51) BS05 HEC ? GO:0009055 ... P24092 12356749
    18540 1h29:D (2.51) BS06 HEC ? GO:0009055 ... P24092 12356749
    18541 1h29:D (2.51) BS07 HEC ? GO:0009055 ... P24092 12356749
    18542 1h29:D (2.51) BS08 HEC ? GO:0009055 ... P24092 12356749
    18543 1h29:D (2.51) BS09 HEC ? GO:0009055 ... P24092 12356749
    18544 1h29:D (2.51) BS10 HEC ? GO:0009055 ... P24092 12356749
    18545 1h29:D (2.51) BS11 HEC ? GO:0009055 ... P24092 12356749
    18546 1h29:D (2.51) BS12 HEC ? GO:0009055 ... P24092 12356749
    18547 1h29:D (2.51) BS13 HEC ? GO:0009055 ... P24092 12356749
    18548 1h29:D (2.51) BS14 HEC ? GO:0009055 ... P24092 12356749
    18549 1h29:D (2.51) BS15 HEC ? GO:0009055 ... P24092 12356749
    18550 1h29:D (2.51) BS16 HEC ? GO:0009055 ... P24092 12356749
    18551 1h2a:L (1.8) BS01 MG 1.12.2.1 GO:0008901 ... P21852 9438867
    18552 1h2a:L (1.8) BS02 NFE 1.12.2.1 GO:0008901 ... P21852 9438867
    18553 1h2a:S (1.8) BS01 SF4 1.12.2.1 GO:0008901 ... P21853 9438867
    18554 1h2a:S (1.8) BS02 SF4 1.12.2.1 GO:0008901 ... P21853 9438867
    18555 1h2a:S (1.8) BS03 F3S 1.12.2.1 GO:0008901 ... P21853 9438867
    18556 1h2b:A (1.62) BS01 OCA 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18557 1h2b:A (1.62) BS02 NAJ 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18558 1h2b:A (1.62) BS03 ZN 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18559 1h2b:A (1.62) BS04 ZN 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18560 1h2b:A (1.62) BS05 ZN 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18561 1h2b:B (1.62) BS01 OCA 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18562 1h2b:B (1.62) BS02 NAJ 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18563 1h2b:B (1.62) BS03 ZN 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18564 1h2b:B (1.62) BS04 ZN 1.1.1.1 GO:0004022 ... Q9Y9P9 12927540
    18565 1h2c:A (1.6) BS01 rna ? N/A Q05128 12679020
    18566 1h2d:A (2.6) BS01 rna ? N/A Q05128 12679020
    18567 1h2d:B (2.6) BS01 rna ? N/A Q05128 12679020
    18568 1h2e:A (1.69) BS01 PO4 ? GO:0003824 ... Q9ALU0 12498792
    18569 1h2f:A (2.0) BS01 VA3 ? GO:0003824 ... Q9ALU0 12498792
    18570 1h2f:A (2.0) BS02 PO4 ? GO:0003824 ... Q9ALU0 12498792
    18571 1h2g:B (2.0) BS01 CA 3.5.1.11 GO:0016787 ... P06875 12511194
    18572 1h2h:A (2.6) BS01 NAD 1.4.1.21 GO:0009435 ... Q9X1X6 12496312
    18573 1h2j:A (1.15) BS01 DCB 3.2.1.4 GO:0000272 ... O85465 12595701
    18574 1h2k:A (2.15) BS01 peptide 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18575 1h2k:A (2.15) BS02 FE2 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18576 1h2l:A (2.25) BS01 peptide 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18577 1h2l:A (2.25) BS02 FE2 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18578 1h2l:A (2.25) BS03 AKG 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18579 1h2m:A (2.5) BS01 peptide 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18580 1h2m:A (2.5) BS02 ZN 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18581 1h2n:A (2.84) BS01 FE2 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18582 1h2n:A (2.84) BS02 AKG 1.14.11.30
    1.14.11.n4
    GO:0000122 ... Q9NWT6 12446723
    18583 1h2r:L (1.4) BS01 SF4 1.12.2.1 GO:0008901 ... P21852 10378274
    18584 1h2r:L (1.4) BS02 MG 1.12.2.1 GO:0008901 ... P21852 10378274
    18585 1h2r:L (1.4) BS03 NFE 1.12.2.1 GO:0008901 ... P21852 10378274
    18586 1h2r:S (1.4) BS01 SF4 1.12.2.1 GO:0008901 ... P21853 10378274
    18587 1h2r:S (1.4) BS02 SF4 1.12.2.1 GO:0008901 ... P21853 10378274
    18588 1h2r:S (1.4) BS03 F3S 1.12.2.1 GO:0008901 ... P21853 10378274
    18589 1h2s:A (1.93) BS01 RET ? GO:0005216 ... P42196 12368857
    18590 1h2t:Z (2.1) BS01 GDP ? GO:0000184 ... P52298 12374755
    18591 1h2t:Z (2.1) BS02 7MG ? GO:0000184 ... P52298 12374755
    18592 1h2u:X (2.4) BS01 GDP ? GO:0000184 ... P52298 12374755
    18593 1h2u:X (2.4) BS02 7MG ? GO:0000184 ... P52298 12374755
    18594 1h2u:Y (2.4) BS01 GDP ? GO:0000184 ... P52298 12374755
    18595 1h2u:Y (2.4) BS02 7MG ? GO:0000184 ... P52298 12374755
    18596 1h2y:A (1.78) BS01 ZPR 3.4.21.26 GO:0004252 ... P23687 12202494 BindingDB: IC50=0.33nM
    18597 1h2z:A (1.65) BS01 PRO 3.4.21.26 GO:0004252 ... P23687 12202494
    18598 1h30:A (2.2) BS01 CA ? N/A Q14393 12218057
    18599 1h31:A (2.55) BS01 HEC 2.8.5.2 GO:0004792 ... Q939U1 12411478
    18600 1h31:A (2.55) BS02 HEC 2.8.5.2 GO:0004792 ... Q939U1 12411478

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).