SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    193201 3upx:A (2.27) BS01 B6A 2.7.11.17 GO:0000166 ... Q9BJF5 22369268 MOAD: Ki=0.0075uM
    BindingDB: IC50=15nM
    193202 3upy:A (1.8) BS01 MG ? GO:0016491 ... Q2YIM3 22442144
    193203 3upy:A (1.8) BS02 FOM ? GO:0016491 ... Q2YIM3 22442144 MOAD: ic50=2.39uM
    193204 3upy:B (1.8) BS01 MG ? GO:0016491 ... Q2YIM3 22442144
    193205 3upz:A (2.2) BS01 B5A 2.7.11.17 GO:0000166 ... Q9BJF5 22369268
    193206 3uq0:A (2.14) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193207 3uq0:A (2.14) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193208 3uq0:A (2.14) BS03 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193209 3uq2:A (2.25) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193210 3uq2:A (2.25) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193211 3uq2:A (2.25) BS03 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193212 3uq2:A (2.25) BS04 MG 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 22584622
    193213 3uq3:A (2.6) BS01 peptide ? N/A P15705 22227520
    193214 3uq3:A (2.6) BS02 peptide ? N/A P15705 22227520
    193215 3uq6:A (2.3) BS01 ADN N/A GO:0004001 ... N/A 23275171
    193216 3uq6:A (2.3) BS02 AMP N/A GO:0004001 ... N/A 23275171
    193217 3uq6:B (2.3) BS01 ADN N/A GO:0004001 ... N/A 23275171
    193218 3uq6:B (2.3) BS02 AMP N/A GO:0004001 ... N/A 23275171
    193219 3uq8:A (1.7) BS01 NAD 6.5.1.2 GO:0003911 ... P43813 22230472 MOAD: Kd=45uM
    193220 3uq8:A (1.7) BS02 AMP 6.5.1.2 GO:0003911 ... P43813 22230472
    193221 3uq9:A (2.343) BS01 TBN N/A GO:0004001 ... N/A 23275171
    193222 3uq9:A (2.343) BS02 TBN N/A GO:0004001 ... N/A 23275171
    193223 3uq9:B (2.343) BS01 TBN N/A GO:0004001 ... N/A 23275171
    193224 3uqa:A (1.55) BS01 FK5 5.2.1.8 GO:0003755 ... Q12306
    Q63J95
    24366729
    193225 3uqb:A (1.9) BS01 FK5 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    24366729
    193226 3uqd:A (2.14) BS01 ATP 2.7.1.11 GO:0000287 ... P06999 30996866
    193227 3uqd:A (2.14) BS02 F6P 2.7.1.11 GO:0000287 ... P06999 30996866
    193228 3uqd:A (2.14) BS03 FBP 2.7.1.11 GO:0000287 ... P06999 30996866
    193229 3uqd:B (2.14) BS01 FBP 2.7.1.11 GO:0000287 ... P06999 30996866
    193230 3uqd:B (2.14) BS02 ADP 2.7.1.11 GO:0000287 ... P06999 30996866
    193231 3uqd:B (2.14) BS03 ATP 2.7.1.11 GO:0000287 ... P06999 30996866
    193232 3uqd:B (2.14) BS04 F6P 2.7.1.11 GO:0000287 ... P06999 30996866
    193233 3uqd:C (2.14) BS01 F6P 2.7.1.11 GO:0000287 ... P06999 30996866
    193234 3uqd:C (2.14) BS02 ATP 2.7.1.11 GO:0000287 ... P06999 30996866
    193235 3uqd:C (2.14) BS03 ATP 2.7.1.11 GO:0000287 ... P06999 30996866
    193236 3uqd:C (2.14) BS04 FBP 2.7.1.11 GO:0000287 ... P06999 30996866
    193237 3uqd:C (2.14) BS05 ADP 2.7.1.11 GO:0000287 ... P06999 30996866
    193238 3uqd:D (2.14) BS01 FBP 2.7.1.11 GO:0000287 ... P06999 30996866
    193239 3uqd:D (2.14) BS02 ATP 2.7.1.11 GO:0000287 ... P06999 30996866
    193240 3uqd:D (2.14) BS03 F6P 2.7.1.11 GO:0000287 ... P06999 30996866
    193241 3uqe:A (2.2) BS01 ATP 2.7.1.11 GO:0000287 ... P06999 N/A
    193242 3uqe:A (2.2) BS02 POP 2.7.1.11 GO:0000287 ... P06999 N/A
    193243 3uqe:B (2.2) BS01 ATP 2.7.1.11 GO:0000287 ... P06999 N/A
    193244 3uqf:A (2.27) BS01 BK5 2.7.10.2 GO:0004672 ... P00523 22369268 MOAD: Ki=0.2uM
    193245 3uqf:B (2.27) BS01 BK5 2.7.10.2 GO:0004672 ... P00523 22369268 MOAD: Ki=0.2uM
    193246 3uqg:A (2.2) BS01 B5A 2.7.10.2 GO:0004672 ... P00523 22369268
    193247 3uqg:B (2.2) BS01 B5A 2.7.10.2 GO:0004672 ... P00523 22369268
    193248 3uqo:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 25003390
    193249 3uqo:A (1.8) BS02 3YH 3.4.21.4 GO:0004175 ... P00760 25003390 BindingDB: Ki=21nM
    193250 3uqp:A (1.77) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 23181502
    193251 3uqr:A (3.056) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 23181502
    193252 3uqr:B (3.056) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 23181502
    193253 3uqr:C (3.056) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 23181502
    193254 3uqu:A (1.7) BS01 ZPX 3.4.23.46 GO:0004190 ... P56817 N/A
    193255 3uqv:A (2.4) BS01 CA 3.4.21.4 GO:0004175 ... P00760 25003390
    193256 3uqv:A (2.4) BS02 3YH 3.4.21.4 GO:0004175 ... P00760 25003390 BindingDB: Ki=21nM
    193257 3uqw:A (2.2) BS01 ZPY 3.4.23.46 GO:0004190 ... P56817 N/A
    193258 3uqx:A (1.7) BS01 ZPZ 3.4.23.46 GO:0004190 ... P56817 N/A
    193259 3uqy:L (1.47) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193260 3uqy:L (1.47) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193261 3uqy:M (1.47) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193262 3uqy:M (1.47) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193263 3uqy:S (1.47) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193264 3uqy:S (1.47) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193265 3uqy:S (1.47) BS03 F4S 1.12.99.6 GO:0005515 ... P69739 22431599
    193266 3uqy:T (1.47) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193267 3uqy:T (1.47) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193268 3uqy:T (1.47) BS03 F4S 1.12.99.6 GO:0005515 ... P69739 22431599
    193269 3ur0:B (2.45) BS01 SVR 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0003723 ... Q80J95 22446684 MOAD: ic50=70nM
    193270 3ur0:C (2.45) BS01 SVR 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0003723 ... Q80J95 22446684 MOAD: ic50=70nM
    193271 3ur0:C (2.45) BS02 SVR 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0003723 ... Q80J95 22446684 MOAD: ic50=70nM
    193272 3ur2:A (2.0) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193273 3ur2:A (2.0) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193274 3ur2:B (2.0) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193275 3ur2:B (2.0) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193276 3ur3:C (2.405) BS01 CA ? N/A Q8U1S6 22405013
    193277 3ur3:C (2.405) BS02 CA ? N/A Q8U1S6 22405013
    193278 3ur3:C (2.405) BS03 ZN ? N/A Q8U1S6 22405013
    193279 3ur4:A (1.8) BS01 0BW ? GO:0000122 ... P61964 22989411 BindingDB: Kd=3000nM
    193280 3ur4:B (1.8) BS01 0BW ? GO:0000122 ... P61964 22989411 BindingDB: Kd=3000nM
    193281 3ur5:A (1.6) BS01 DPF 3.1.8.1 GO:0004063 ... P0A434 22809162
    193282 3ur5:A (1.6) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193283 3ur5:A (1.6) BS03 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193284 3ur5:B (1.6) BS01 DPF 3.1.8.1 GO:0004063 ... P0A434 22809162
    193285 3ur5:B (1.6) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193286 3ur5:B (1.6) BS03 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193287 3ur5:B (1.6) BS04 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193288 3ur9:A (1.65) BS01 K36 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 22915796
    193289 3ur9:B (1.65) BS01 K36 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 22915796
    193290 3ura:A (1.88) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193291 3ura:A (1.88) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193292 3ura:B (1.88) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193293 3ura:B (1.88) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193294 3urb:A (1.77) BS01 DPF 3.1.8.1 GO:0004063 ... P0A434 22809162
    193295 3urb:A (1.77) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193296 3urb:A (1.77) BS03 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193297 3urb:B (1.77) BS01 DPF 3.1.8.1 GO:0004063 ... P0A434 22809162
    193298 3urb:B (1.77) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193299 3urb:B (1.77) BS03 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193300 3urg:A (2.003) BS01 MNB ? N/A Q8YY42 23143261
    193301 3urh:A (1.9) BS01 FAD 1.8.1.4 GO:0004148 ... Q92LK0 N/A
    193302 3urh:B (1.9) BS01 FAD 1.8.1.4 GO:0004148 ... Q92LK0 N/A
    193303 3uri:A (2.1) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 22525752
    193304 3urj:A (1.9) BS01 SO4 3.4.23.22 GO:0004190 ... P11838 22525752
    193305 3urj:A (1.9) BS02 SO4 3.4.23.22 GO:0004190 ... P11838 22525752
    193306 3urk:A (1.5) BS01 SF4 1.17.7.4 GO:0005737 ... P62623 22948824
    193307 3urk:A (1.5) BS02 0CG 1.17.7.4 GO:0005737 ... P62623 22948824
    193308 3urk:B (1.5) BS01 SF4 1.17.7.4 GO:0005737 ... P62623 22948824
    193309 3urk:B (1.5) BS02 0CG 1.17.7.4 GO:0005737 ... P62623 22948824
    193310 3url:A (2.0) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 22525752
    193311 3url:A (2.0) BS02 SO4 3.4.23.22 GO:0004190 ... P11838 22525752
    193312 3urm:A (1.801) BS01 GAL ? N/A P25548 23267119
    193313 3urm:B (1.801) BS01 GAL ? N/A P25548 23267119
    193314 3urn:A (1.95) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193315 3urn:A (1.95) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193316 3urn:A (1.95) BS03 QMP 3.1.8.1 GO:0004063 ... P0A434 22809162
    193317 3urn:B (1.95) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193318 3urn:B (1.95) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193319 3urn:B (1.95) BS03 QMP 3.1.8.1 GO:0004063 ... P0A434 22809162
    193320 3urp:A (3.19) BS01 PGP 4.6.1.24 GO:0001411 ... P00651 22505257
    193321 3urq:A (2.1) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193322 3urq:A (2.1) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193323 3urq:A (2.1) BS03 QMP 3.1.8.1 GO:0004063 ... P0A434 22809162
    193324 3urq:B (2.1) BS01 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193325 3urq:B (2.1) BS02 CO 3.1.8.1 GO:0004063 ... P0A434 22809162
    193326 3urq:B (2.1) BS03 QMP 3.1.8.1 GO:0004063 ... P0A434 22809162
    193327 3urz:A (2.19) BS01 ZN N/A N/A N/A N/A
    193328 3urz:A (2.19) BS02 ZN N/A N/A N/A N/A
    193329 3urz:B (2.19) BS01 ZN N/A N/A N/A N/A
    193330 3urz:B (2.19) BS02 ZN N/A N/A N/A N/A
    193331 3us0:A (2.5) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193332 3us0:A (2.5) BS02 dna ? GO:0000976 ... Q9H3D4 22247550
    193333 3us0:A (2.5) BS03 ZN ? GO:0000976 ... Q9H3D4 22247550
    193334 3us0:B (2.5) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193335 3us0:B (2.5) BS02 dna ? GO:0000976 ... Q9H3D4 22247550
    193336 3us0:B (2.5) BS03 ZN ? GO:0000976 ... Q9H3D4 22247550
    193337 3us0:C (2.5) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193338 3us0:C (2.5) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193339 3us0:D (2.5) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193340 3us0:D (2.5) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193341 3us1:A (2.8) BS01 ZN ? GO:0000976 ... Q9H3D4 22247550
    193342 3us1:D (2.8) BS01 ZN ? GO:0000976 ... Q9H3D4 22247550
    193343 3us2:A (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193344 3us2:A (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193345 3us2:B (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193346 3us2:B (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193347 3us2:C (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193348 3us2:C (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193349 3us2:D (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193350 3us2:D (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193351 3us2:G (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193352 3us2:G (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193353 3us2:H (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193354 3us2:H (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193355 3us2:I (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193356 3us2:I (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193357 3us2:J (4.2) BS01 dna ? GO:0000976 ... Q9H3D4 22247550
    193358 3us2:J (4.2) BS02 ZN ? GO:0000976 ... Q9H3D4 22247550
    193359 3us3:A (1.738) BS01 CA ? GO:0000287 ... P07221 22170046
    193360 3us3:A (1.738) BS02 CA ? GO:0000287 ... P07221 22170046
    193361 3us3:A (1.738) BS03 CA ? GO:0000287 ... P07221 22170046
    193362 3us9:A (2.68) BS01 CA ? GO:0007154 ... P23685 22768191
    193363 3us9:A (2.68) BS02 CA ? GO:0007154 ... P23685 22768191
    193364 3us9:A (2.68) BS03 CA ? GO:0007154 ... P23685 22768191
    193365 3usb:A (2.38) BS01 IMP 1.1.1.205 GO:0000166 ... A0A6L8P2U9 22788966
    193366 3usb:B (2.38) BS01 IMP 1.1.1.205 GO:0000166 ... A0A6L8P2U9 22788966
    193367 3usc:L (2.0) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193368 3usc:L (2.0) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193369 3usc:M (2.0) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193370 3usc:M (2.0) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193371 3usc:S (2.0) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193372 3usc:S (2.0) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193373 3usc:S (2.0) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 22431599
    193374 3usc:T (2.0) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193375 3usc:T (2.0) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193376 3usc:T (2.0) BS03 SF3 1.12.99.6 GO:0005515 ... P69739 22431599
    193377 3usd:A (2.4) BS01 peptide 3.4.21.- GO:0005576 ... P24627 N/A
    193378 3usd:A (2.4) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    193379 3usd:A (2.4) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    193380 3usd:A (2.4) BS04 IDL 3.4.21.- GO:0005576 ... P24627 N/A
    193381 3use:L (1.67) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193382 3use:L (1.67) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193383 3use:M (1.67) BS01 FCO 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193384 3use:M (1.67) BS02 MG 1.12.99.6 GO:0005515 ... P0ACD8 22431599
    193385 3use:S (1.67) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193386 3use:S (1.67) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193387 3use:S (1.67) BS03 F4S 1.12.99.6 GO:0005515 ... P69739 22431599
    193388 3use:S (1.67) BS04 SF3 1.12.99.6 GO:0005515 ... P69739 22431599
    193389 3use:T (1.67) BS01 SF4 1.12.99.6 GO:0005515 ... P69739 22431599
    193390 3use:T (1.67) BS02 F3S 1.12.99.6 GO:0005515 ... P69739 22431599
    193391 3use:T (1.67) BS03 F4S 1.12.99.6 GO:0005515 ... P69739 22431599
    193392 3use:T (1.67) BS04 SF3 1.12.99.6 GO:0005515 ... P69739 22431599
    193393 3usf:A (2.463) BS01 PLR 5.4.3.8 GO:0005737 ... Q31QJ2 N/A
    193394 3usf:A (2.463) BS02 HOZ 5.4.3.8 GO:0005737 ... Q31QJ2 N/A
    193395 3usf:B (2.463) BS01 HOZ 5.4.3.8 GO:0005737 ... Q31QJ2 N/A
    193396 3usf:B (2.463) BS02 PLR 5.4.3.8 GO:0005737 ... Q31QJ2 N/A
    193397 3usg:A (2.502) BS01 LEU ? GO:0005886 ... O67854 22245965
    193398 3usg:A (2.502) BS02 NA ? GO:0005886 ... O67854 22245965
    193399 3usg:A (2.502) BS03 PC ? GO:0005886 ... O67854 22245965
    193400 3usg:A (2.502) BS04 NA ? GO:0005886 ... O67854 22245965

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).